SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GRMZM2G134313_P04 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G134313_P04
Domain Number 1 Region: 32-250
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 4.58e-57
Family Regulator of chromosome condensation RCC1 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G134313_P04   Gene: GRMZM2G134313   Transcript: GRMZM2G134313_T04
Sequence length 263
Comment seq=translation; coord=4:196671377..196677698:-1; parent_transcript=GRMZM2G134313_T04; parent_gene=GRMZM2G134313
Sequence
MWRATRRSPPFLRWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLA
RAADPPASLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVE
VSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSE
HSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGM
LHSACIDGKGIWKTERRIQTKYC
Download sequence
Identical sequences GRMZM2G134313_T03|PACid:20855374 GRMZM2G134313_P04

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]