SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GRMZM2G174784_P02 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G174784_P02
Domain Number 1 Region: 122-154
Classification Level Classification E-value
Superfamily DNA-binding domain 0.0000915
Family GCC-box binding domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G174784_P02   Gene: GRMZM2G174784   Transcript: GRMZM2G174784_T02
Sequence length 167
Comment seq=translation; coord=2:5516143..5520274:-1; parent_transcript=GRMZM2G174784_T02; parent_gene=GRMZM2G174784
Sequence
MWDLNDSPAAEAAPPSPSADDSGASSSSAAALVEIPDDADDDSAAAAAEAVVTRQFFPAP
AAVGAAPGPGSSSARAGWLRLAAAAPPPAAGGSNGVAQTGGPAAAAAAAGKKSRRGPRSR
SSQYRGVTFYRRTGRWESHIWDCGKQVYLGKFRSCPCIHIRTWERGG
Download sequence
Identical sequences GRMZM2G174784_T02|PACid:20842519 GRMZM2G174784_T03|PACid:20842520 GRMZM2G174784_T04|PACid:20842521 GRMZM2G174784_P02 GRMZM2G174784_P03 GRMZM2G174784_P04

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]