SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GRMZM2G018336_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G018336_P01
Domain Number 1 Region: 51-149
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.54e-30
Family B3 DNA binding domain 0.0000199
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G018336_P01   Gene: GRMZM2G018336   Transcript: GRMZM2G018336_T01
Sequence length 242
Comment seq=translation; coord=5:28499883..28501236:-1; parent_transcript=GRMZM2G018336_T01; parent_gene=GRMZM2G018336
Sequence
MLRKHTYFDELAQNKRAFAAAAAAASSAAATTSTSLGNDNRSSSPACAREHLFDKAVTPS
DVGKLNRLVIPKQHAERHFPLHLAAAAGGGESTGVLLNLEDAAGKVWRFRYSYWNSSQSY
VLTKGWSRFVKEKGLQAGDVVGFYRSAAGADSKLFIDCKLRPNSVDTASTTSPVGSSPPP
APVAKAVRLFGVDLLTAPADAMARCKRARDLASPPQAAIKKQLVELALASVDQCYGAGRS
FS
Download sequence
Identical sequences K7V0T7
GRMZM2G018336_P01 GRMZM2G065538_P01 GRMZM2G018336_T01|PACid:20879687 GRMZM2G065538_T01|PACid:20854430

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]