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Domain assignment for GRMZM2G019956_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G019956_P01
Domain Number 1 Region: 241-345
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.23e-18
Family B3 DNA binding domain 0.0059
Further Details:      
 
Domain Number 2 Region: 49-145
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000000000111
Family B3 DNA binding domain 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G019956_P01   Gene: GRMZM2G019956   Transcript: GRMZM2G019956_T01
Sequence length 348
Comment seq=translation; coord=5:18022726..18025468:-1; parent_transcript=GRMZM2G019956_T01; parent_gene=GRMZM2G019956
Sequence
MATVSSSSDEESGEDIVSENVVLGYVLAYRCYLSKAQKKRVMGLVQEIQPQFTAFVSIMR
RGNVQPPGPNLGITKEYATAHFPDRSTHITLGTPGKSKKWHPRFYRRDVSRNYMVTGEWL
DFVRDNHVQEGDICLLLPTRDDVMRRTFTVYVLHETSHYSAGGPGASSVAKMASEIRTEE
EPAAGESVSSGTSGAQEFPHGSAVESGGDSGDSFEPPYFVPCKSPLSESQKRIVEERVRA
IRSEIPICVAVMKNNNVGFAQRWMLELGSRYGSVYLPTKGQTILLCCAGKTWKAKMMFHN
GRRWFLNGGWPNFARGNGLRVGDICLFQLEKNESTLTMAVHIIRREQF
Download sequence
Identical sequences GRMZM2G019956_T01|PACid:20877007 GRMZM2G019956_P01

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