SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GRMZM2G027253_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G027253_P01
Domain Number 1 Region: 24-132
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.66e-28
Family B3 DNA binding domain 0.0000452
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G027253_P01   Gene: GRMZM2G027253   Transcript: GRMZM2G027253_T01
Sequence length 224
Comment seq=translation; coord=6:56688261..56688935:-1; parent_transcript=GRMZM2G027253_T01; parent_gene=GRMZM2G027253
Sequence
MALTTLTLELESAAGDYSHSHSRRERMFEKVVTPSDVGKLNRLVVPKQFAERHLPLRGAA
ARSRGMVLCFHDDARGGEAWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVAFCRDG
ARLFIDCQRRRRTTTRRSGSEGAVVLPAPAIGAAVPPMCQLQMTVVFPAGQHQQAAVAMK
KETAAAQQEDDNEVQRRRGRCLRLFGVNLLDELRTEPLLLDLQL
Download sequence
Identical sequences K7UJS6
GRMZM2G027253_P01 GRMZM2G027253_T01|PACid:20821941

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]