SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GRMZM2G065496_P05 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G065496_P05
Domain Number 1 Region: 22-122
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.96e-20
Family B3 DNA binding domain 0.00098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G065496_P05   Gene: GRMZM2G065496   Transcript: GRMZM2G065496_T05
Sequence length 273
Comment seq=translation; coord=1:164919012..164921856:-1; parent_transcript=GRMZM2G065496_T05; parent_gene=GRMZM2G065496
Sequence
MVGAKGCERCRDWQEHYYWEHMDASKIRFFRCMTGDFAHRISVPEKFAKNFKGQITEEFH
LKSPSSAETWHVGVEKHGDKLFLVSGWENFAKAHELEENDLLLFACSGNSSFEVLVFGAS
GCEKVSSLFGSGLGPDMGKQFNDVVRRHGVHHSVTVSDSEDTVAPSQLVRSPRNALPLKE
PSGKARPSKYESPNSSNFIVRHVATGKEGTDDEYANSNYYYSLSANRLGDEEKEEIIGLA
PHPTEQSCICDPSEEKPCSAQKQLSDHPKQVCC
Download sequence
Identical sequences GRMZM2G065496_P01 GRMZM2G065496_P05 GRMZM2G065496_T02|PACid:20869539 GRMZM2G065496_T03|PACid:20869540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]