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Domain assignment for GRMZM2G086949_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G086949_P01
Domain Number 1 Region: 142-281
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.63e-45
Family B3 DNA binding domain 0.0045
Further Details:      
 
Domain Number 2 Region: 870-930
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000432
Family PB1 domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G086949_P01   Gene: GRMZM2G086949   Transcript: GRMZM2G086949_T01
Sequence length 954
Comment seq=translation; coord=10:146657292..146662408:-1; parent_transcript=GRMZM2G086949_T01; parent_gene=GRMZM2G086949
Sequence
MMASSQEKATSGVLRNAAALLDEMQLMGETQGAKKVINSELWHACAGPLVCLPQRGSLVY
YFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQPLH
SVRELCCSAETDVFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQ
LDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIR
DEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSP
FVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQ
VEWDEHGYGERPERVSIWDIETPENMVFSSPLNSKRQCLPSYGVPGLQIGSVNMSSIPRA
QGNPIGNLQHMPGMGSELALLLLNQSGQNIGSPIACQQSSFSSIIQNAKHSYFPPKTFGA
STASMKQESMPSTEAQPQLNALGIQRSDRVSCEVQTASDSNPAQEMSVKPRAPRSTDSHS
SQSISDQNSKGEPRTKTRRSKKSSYQKTISDKSELCSVPSQICDDKKHGSEPRLADCEAE
QATCGNNEESSGALTHGDFAGELQVQQQVEQHELLAPPKIESSKSPDGGKSVSSFPNQGC
IPQFFEGLDWMIPPSYYQDSNGIQSVTASDNIFNPSEGIPSTMNADALDAFQTSCLSECF
PSSIQEFIGSPDINTLAFMSPEMQQLDAGSNLPSTSNSYVQMSFSEESHSASLSGLHMEA
IHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGTD
RSAKQMKPPVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWK
LVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGVHVLNDCIQIA
Download sequence
Identical sequences GRMZM2G086949_P01

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