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Domain assignment for GRMZM2G088427_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G088427_P01
Domain Number 1 Region: 22-120
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.75e-22
Family B3 DNA binding domain 0.0035
Further Details:      
 
Domain Number 2 Region: 229-330
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.75e-17
Family B3 DNA binding domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G088427_P01   Gene: GRMZM2G088427   Transcript: GRMZM2G088427_T01
Sequence length 337
Comment seq=translation; coord=1:253475555..253477657:-1; parent_transcript=GRMZM2G088427_T01; parent_gene=GRMZM2G088427
Sequence
MRKPSNGCKERDVIYHRNDHTDDNGKHFFKILIGDFHKRLVIPVKFAKKFRGKVERNIKL
ESLGGYTFDVQVAQNLGRIMFQSGWKSFVSAHDLKMFDLLVFKYDGMSRMKVLIFDPSGC
EKVPPFFVTKNAMSGGRKREEPQEPLDISSSYADLPMKTPETKKKARKQRDRSRINISPC
RSISNSSGGMRSSEDDEAHSVPSCILPRGTILDSMQRRKVKERLRAICSEIPIYVFVVKK
SNIFGRSQDMVFSRKYPDVCLPFKSGAVILQCHGKSWEVILEVRKDQGESKRLRIGWAEF
ARDNNLQLGDICLFEPLKTMKYTMNVHIVRRRVRSGK
Download sequence
Identical sequences GRMZM2G088427_P01 XP_008665125.1.34533 XP_020402857.1.34533 GRMZM2G088427_T01|PACid:20870033

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