SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GRMZM2G106673_P02 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G106673_P02
Domain Number 1 Region: 146-244
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.02e-23
Family B3 DNA binding domain 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G106673_P02   Gene: GRMZM2G106673   Transcript: GRMZM2G106673_T02
Sequence length 251
Comment seq=translation; coord=4:26345030..26352394:1; parent_transcript=GRMZM2G106673_T02; parent_gene=GRMZM2G106673
Sequence
MISHTAAITIYTKTGERREMAEATPYEEQRRRQVEANKRKLEELQLHHLSAAIREAAAAA
KPSLVKKRKARVPLDVADAVMEPVRRSGRLANLPDKPVYREKVPDFGMKIRRTYGSVRRD
LTNRVYATDDARSYAISKAEDLEQELDSSFPIFIKPMTQSHVTGGFWLGLPIHFCRKYLP
KRDEMITLVDEDDDESDTLYLAMKRGLSAGWRGFAVQQKLVDGDCLVFQLIEQTKFKVYI
TRASSYYESED
Download sequence
Identical sequences B4FK06
NP_001136712.1.34533 XP_008676667.1.34533 GRMZM2G106673_T02|PACid:20856929 GRMZM2G106673_P02

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]