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Domain assignment for GRMZM2G109879_P02 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G109879_P02
Domain Number 1 Region: 140-238
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.28e-16
Family B3 DNA binding domain 0.0059
Further Details:      
 
Domain Number 2 Region: 300-394
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.67e-16
Family B3 DNA binding domain 0.0046
Further Details:      
 
Domain Number 3 Region: 18-114
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000667
Family B3 DNA binding domain 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G109879_P02   Gene: GRMZM2G109879   Transcript: GRMZM2G109879_T02
Sequence length 586
Comment seq=translation; coord=2:99475514..99481963:1; parent_transcript=GRMZM2G109879_T02; parent_gene=GRMZM2G109879
Sequence
MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGK
VWRVEVVRDGHGASLGRGWAEFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGA
PAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKDYVSEECLNSRIAIIFSPIAK
FWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSS
WIKKRINTYALEQFLALSVKFCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIG
VGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAADTFNKQKKPPCSSSRDKKGSS
SREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTL
LGPVGKNSARRTELRLVMSAPSMSSKPSCGMSSSHAVAKLWLLQPA
Download sequence
Identical sequences GRMZM2G109879_T02|PACid:20848461 GRMZM2G109879_P02

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