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Domain assignment for GRMZM2G378580_P06 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G378580_P06
Domain Number 1 Region: 142-277
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.37e-40
Family B3 DNA binding domain 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G378580_P06   Gene: GRMZM2G378580   Transcript: GRMZM2G378580_T06
Sequence length 751
Comment seq=translation; coord=4:23393273..23398028:-1; parent_transcript=GRMZM2G378580_T06; parent_gene=GRMZM2G378580
Sequence
MTSSAAAAAAAAQVAGGGGGGEGDAAAAARGGGGTEDGMYTELWNLCAGPLVTVPRVGDK
VYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPE
SKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMT
RQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSG
ELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVP
CDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWD
EASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTL
ETQQHALQRPLQTQDNVAPKSVFGDNSELDSAHKSSLRPSGFDLDKSTIGMQRKLGSDIW
MRMNRPDGYSEMLSGYQPPNEGARNSQGFCSLPDQIAAGRPNFWHTVNAHYQDQQGNHNL
FPGSWSMMPSSTGFGMNRQSYPMIQEVGGMSQSCTNTKFGNGVYAALPGRGIDRYPSGWF
GHTTPGGRVDDAQPRVIKPQPLVLAHGEALKMKGNSCKLFGIHLDSPAKSEPLKSPPSVA
TPAAEKWMADGIDADKSPEPHKTPKQLGATQVDPVPERCPQASRGTQCKSQGGSTRSCKK
VCFFLSLLLCQASPMFVCNVPRLQEKLAKPL
Download sequence
Identical sequences GRMZM2G378580_T06|PACid:20857211 GRMZM2G378580_P06

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