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Domain assignment for LH17224-PA from Linepithema humile v1.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LH17224-PA
Domain Number 1 Region: 706-1267
Classification Level Classification E-value
Superfamily Molybdenum cofactor-binding domain 3.79e-144
Family Molybdenum cofactor-binding domain 0.0000000304
Further Details:      
 
Domain Number 2 Region: 539-692
Classification Level Classification E-value
Superfamily CO dehydrogenase molybdoprotein N-domain-like 3.14e-40
Family CO dehydrogenase molybdoprotein N-domain-like 0.00013
Further Details:      
 
Domain Number 3 Region: 225-400
Classification Level Classification E-value
Superfamily FAD-binding/transporter-associated domain-like 8.72e-29
Family CO dehydrogenase flavoprotein N-terminal domain-like 0.0053
Further Details:      
 
Domain Number 4 Region: 406-515
Classification Level Classification E-value
Superfamily CO dehydrogenase flavoprotein C-terminal domain-like 5.49e-28
Family CO dehydrogenase flavoprotein C-terminal domain-like 0.002
Further Details:      
 
Domain Number 5 Region: 112-185
Classification Level Classification E-value
Superfamily CO dehydrogenase ISP C-domain like 2.62e-26
Family CO dehydrogenase ISP C-domain like 0.00019
Further Details:      
 
Domain Number 6 Region: 22-106
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 0.0000000000000879
Family 2Fe-2S ferredoxin domains from multidomain proteins 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LH17224-PA
Sequence length 1279
Comment genemark-scf7180001004926-abinit-gene-12.120-mRNA-1 protein AED:0.06819694470763 QI:290|0.72|0.68|0.84|0.94|0.94|19|0|1279
Sequence
MPTIKQKLLDAKNLTINSATNSTINFTINEVPYTVSGDIPASTSLNVYIRDHAKLRGTKA
MCHEGGCGACIVAAEIKGETLAVNSCLVPIFICDGWAIRTIEGLGNKKDGYHSMQATLAV
KNGSQCGYCSPGMVMNLYSLLKDKKLTMLEIENSFGSNICRCTGYRPILDAFKGFASDAP
ASMVKEIRDIEELYQIKTCPKDGKPCTFRCGSKKYSEAKTLDIKLEDSEFFKVYTVDDLF
AIFQQKPKATYILNGGNTAHGVYRVGKNDLRIDINDIKELRNIEKTKQSLTLGGNISLTL
AMETFRKYSSETGFKHLQHLAHHIDLIASVPVRNIGSLAGNLMIKHAHHEFPSDLFLMLE
TAGSQVHILEGPGRKQSMMLQDFLKCDMRHKIIYSIVLPALSDEYQYRSYKIMPRAQNAH
AHINAGFLFKLDGGGKVLEKPNIIFGGINEHFLHAKKTEELLVGKSIFDKQVLKTALETL
HNELQPDHVLPDGSPEFRKTLSEGLFYKCVLSIRPENLNARLRSGGPILERGLSSAKPDY
DTDKNMWPVNKPLAKIESIHQTSGEAQYCNDLPPYPGEVFCAFVSTEIANGKIESIDASK
ALALKGVVAFFTAKDIPGKNACISSNNKLMMMNQDEILFADKDVLYAGQPVGVIAAETHN
LANEAAKLVKIKYSESLKKKPVLTLEDALASQDDTRFMVGATIPRQKKGENVKHVIKDVF
SCGSQYHYTMETQSCVCVPVEDGMDVYPTTQWIDIIQVAIADVLGIKNNSINVSVKRIGG
AYGAKISRNAIVACTCALVCHKLNRPARLILSIESNMHTIGKRVATRQEYEVGVDDQGVI
QYLDSKHWGNGGCSFNEPIAFATVHHIISCYVGDVMDIIGYEVRTDIPSNTYCRAPGSAE
GIAMIECIMEHIARVTKKDPVQVRLANMPDADKVILEKMIKDLFKSADYDMRKQAVETFN
SENRWKKKGISVVPMKYPLFYWGQFNAQVSICARDGTVVITHGGIECGQGIHTKVAQVVA
HTLGIDLELVTVKTTNNIAAPNNSVTGGSLGSESCAHAAIQCCKELLNRLEPIKKQMNNP
SWKDLVLNAYEKDVDLCARYMSAATKETDVLQAYSIYGVTIAEVEIDLLTGQHIVRRVDL
VEDCGISLNPEVDLGQVEGAFIMGIGYWTSEELVYDPKTGAIMNDRTWNYKPPGVKDIPV
DFRATLLKNSANTVGVLRSKASGEPSLCMAVAIPIAMRNAMSSARAEVGNTDIWYQLDAP
YTNERIIRNSLTSKDNMVL
Download sequence
Identical sequences XP_012221434.1.42766 XP_012221435.1.42766 LH17224-PA

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