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Domain assignment for gi|549484240|ref|YP_008617941.1| from Bacteroides sp. CF50

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|549484240|ref|YP_008617941.1|
Domain Number 1 Region: 51-175
Classification Level Classification E-value
Superfamily Insert subdomain of RNA polymerase alpha subunit 4.5e-35
Family Insert subdomain of RNA polymerase alpha subunit 0.00013
Further Details:      
 
Domain Number 2 Region: 4-51,176-228
Classification Level Classification E-value
Superfamily RBP11-like subunits of RNA polymerase 1.47e-29
Family RNA polymerase alpha subunit dimerisation domain 0.0042
Further Details:      
 
Domain Number 3 Region: 254-327
Classification Level Classification E-value
Superfamily C-terminal domain of RNA polymerase alpha subunit 1.57e-20
Family C-terminal domain of RNA polymerase alpha subunit 0.00091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|549484240|ref|YP_008617941.1|
Sequence length 336
Comment hypothetical protein BRDCF_08960 [Bacteroides sp. CF50]
Sequence
MAILAFQKPDKVIMLDATETFGRFEFRPLEPGYGITVGNALRRILLSSLEGYAITSIKIQ
GVDHEFATIPGVIETVVDIILNLKQVRFKRMVEGEESEIVNVSVSGKQNFIAEDISKQMS
SFKVLNPDWHICSMEPSVTLNIELRIGKGRGYVPAEENKVEDAPFGLIPIDSIFTPIKNV
KYSVENWRVEQKTDFEKLNLEITTDGSIHPKEALKEAAKILIHHFMLFSDEKITLETPVE
VISNELDEESLRMRHLLLTKLADMELSVRALNCLKAADIETFAELVSLQRAELMKFRNFG
KKSLSEIDQLVERYRLTFGMDVTKYNIEKKVLKHEA
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Identical sequences U5Q725
gi|549484240|ref|YP_008617941.1| WP_022546447.1.75430

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