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beta-beta-alpha zinc fingers superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 55 significant domains in 47 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|113910|estExt_Genewise1.C_240098   0.0000254   13-59   Classic zinc finger, C2H2  
jgi|Conpu1|114784|estExt_Genewise1Plus.C_1_t30037   0.00000000108   248-301   Classic zinc finger, C2H2  
jgi|Conpu1|116293|estExt_Genewise1Plus.C_1_t60245   0.0000211   102-129   Classic zinc finger, C2H2  
  0.000172   209-260   Classic zinc finger, C2H2  
  0.00694   2-23   Classic zinc finger, C2H2  
  0.0277   114-155   Classic zinc finger, C2H2  
  0.0392   55-77   Classic zinc finger, C2H2  
  0.0397   77-99   Classic zinc finger, C2H2  
jgi|Conpu1|118030|estExt_Genewise1Plus.C_2_t30472   0.0000964   550-591   HkH motif-containing C2H2 finger  
jgi|Conpu1|118852|estExt_Genewise1Plus.C_2_t60043   0.0000000000192   44-88   Classic zinc finger, C2H2  
jgi|Conpu1|122044|estExt_Genewise1Plus.C_4_t40165   0.00000000287   355-403   Classic zinc finger, C2H2  
  0.00378   412-432   Classic zinc finger, C2H2  
jgi|Conpu1|124733|estExt_Genewise1Plus.C_6_t30317   1.67e-21   35-151   variant C2H2 finger  
jgi|Conpu1|127181|estExt_Genewise1Plus.C_9_t20297   2.05e-19   626-684   Classic zinc finger, C2H2  
  0.00000000000000242   673-727   Classic zinc finger, C2H2  
  0.000000332   597-637   Classic zinc finger, C2H2  
  0.0000143   146-172   Classic zinc finger, C2H2  
  0.0643   544-568   Classic zinc finger, C2H2  
jgi|Conpu1|133930|estExt_fgenesh1_pm.C_1_t10355   0.00000186   184-222   Classic zinc finger, C2H2  
jgi|Conpu1|135698|estExt_fgenesh1_pm.C_3_t10341   0.00000000000228   315-363   Classic zinc finger, C2H2  
  0.0771   503-528   Classic zinc finger, C2H2  
jgi|Conpu1|135949|estExt_fgenesh1_pm.C_4_t10014   0.00000000000242   16-63   Classic zinc finger, C2H2  
jgi|Conpu1|136509|estExt_fgenesh1_pm.C_5_t10005   0.00000000000038   305-359   Classic zinc finger, C2H2  
jgi|Conpu1|136853|estExt_fgenesh1_pm.C_5_t10387   4.46e-19   1-58   HkH motif-containing C2H2 finger  
jgi|Conpu1|137672|estExt_fgenesh1_pm.C_70220   0.0000000000000569   36-89   Classic zinc finger, C2H2  
jgi|Conpu1|138810|estExt_fgenesh1_pm.C_100291   0.0000000078   417-495   Classic zinc finger, C2H2  
jgi|Conpu1|139557|estExt_fgenesh1_pm.C_140012   0.00000000000835   215-265   Classic zinc finger, C2H2  
jgi|Conpu1|139896|estExt_fgenesh1_pm.C_150102   0.000000000000428   8-58   Classic zinc finger, C2H2  
jgi|Conpu1|140441|estExt_fgenesh1_pm.C_190089   0.000000000000253   25-81   Classic zinc finger, C2H2  
jgi|Conpu1|150928|gm1.2919_g   0.000000149   43-89   Classic zinc finger, C2H2  
  0.0148   16-42   Classic zinc finger, C2H2  
  0.0867   78-116   Classic zinc finger, C2H2  
jgi|Conpu1|152178|gm1.4169_g   0.00000000000000678   158-209   Classic zinc finger, C2H2  
jgi|Conpu1|154513|gm1.6504_g   0.000000000000968   320-374   Classic zinc finger, C2H2  
jgi|Conpu1|160988|estExt_Genemark1.C_1_t10261   0.000000000000191   198-246   Classic zinc finger, C2H2  
jgi|Conpu1|163763|estExt_Genemark1.C_4_t10103   0.00000000214   9-51   HkH motif-containing C2H2 finger  
jgi|Conpu1|164140|estExt_Genemark1.C_4_t20059   0.00000000000000114   224-276   Classic zinc finger, C2H2  
jgi|Conpu1|164341|estExt_Genemark1.C_4_t20292   0.000000302   261-309   Classic zinc finger, C2H2  
jgi|Conpu1|165386|estExt_Genemark1.C_6_t10301   0.00000298   26-58   Classic zinc finger, C2H2  
jgi|Conpu1|165996|estExt_Genemark1.C_7_t10336   0.00000000000000344   112-166   Classic zinc finger, C2H2  
jgi|Conpu1|167911|estExt_Genemark1.C_11_t10386   0.00000000000147   125-166   Classic zinc finger, C2H2  
  0.0000000766   75-104   Classic zinc finger, C2H2  
jgi|Conpu1|35776|gw1.4.1556.1   0.0000000000000252   9-69   Classic zinc finger, C2H2  
jgi|Conpu1|38662|gw1.9.1164.1   0.000000819   42-76   Classic zinc finger, C2H2  
jgi|Conpu1|38752|gw1.3.1963.1   0.0000000000138   2-49   Classic zinc finger, C2H2  
jgi|Conpu1|45476|e_gw1.1.4.1   0.00000000000168   78-122   Classic zinc finger, C2H2  
  0.000000586   114-142   Classic zinc finger, C2H2  
jgi|Conpu1|46073|e_gw1.1.121.1   0.00000000000635   85-140   Classic zinc finger, C2H2  
jgi|Conpu1|49712|e_gw1.3.85.1   1.93e-17   46-105   Classic zinc finger, C2H2  
jgi|Conpu1|60762|e_gw1.10.53.1   0.000000000000902   19-79   Classic zinc finger, C2H2  
  0.0000000317   80-124   Classic zinc finger, C2H2  
  0.000000268   127-159   Classic zinc finger, C2H2  
  0.000215   256-292   Classic zinc finger, C2H2  
  0.0232   185-221   Classic zinc finger, C2H2  
jgi|Conpu1|64416|e_gw1.14.291.1   0.0000000000319   42-91   Classic zinc finger, C2H2  
jgi|Conpu1|70424|fgenesh1_pg.2_#_757   0.00000816   35-90   Classic zinc finger, C2H2  
jgi|Conpu1|73697|fgenesh1_pg.7_#_378   0.000000357   3-60   Classic zinc finger, C2H2  
jgi|Conpu1|82604|fgenesh1_kg.7_#_106_#_isotig03062   0.000000563   186-218   Classic zinc finger, C2H2  
jgi|Conpu1|82708|fgenesh1_kg.7_#_210_#_isotig01702   0.0000000000000846   50-104   Classic zinc finger, C2H2  
jgi|Conpu1|83275|fgenesh1_kg.9_#_36_#_isotig10234   7.23e-17   47-108   HkH motif-containing C2H2 finger  
jgi|Conpu1|84837|fgenesh1_kg.14_#_55_#_isotig08130   0.000000000121   246-298   Classic zinc finger, C2H2  
  0.00364   222-255   Classic zinc finger, C2H2  
jgi|Conpu1|86828|fgenesh1_pm.1_#_708   0.0000476   50-85   HkH motif-containing C2H2 finger  
jgi|Conpu1|88151|fgenesh1_pm.3_#_38   0.0000000000000894   5-52   Classic zinc finger, C2H2  
jgi|Conpu1|88270|fgenesh1_pm.3_#_157   0.0000000172   43-89   Classic zinc finger, C2H2  
  0.00355   17-42   Classic zinc finger, C2H2  
jgi|Conpu1|96469|estExt_Genewise1.C_1_t60281   0.000000253   102-130   Classic zinc finger, C2H2  
  0.000122   205-257   Classic zinc finger, C2H2  
  0.0174   54-99   Classic zinc finger, C2H2  
  0.0185   3-47   Classic zinc finger, C2H2  
  0.0357   133-155   Classic zinc finger, C2H2  
jgi|Conpu1|97988|estExt_Genewise1.C_2_t30231   3.77e-21   396-457   Classic zinc finger, C2H2  
  0.0000000000000164   444-500   Classic zinc finger, C2H2  
 
Weak hits:
jgi|Conpu1|107631|estExt_Genewise1.C_9_t30047   0.000618   219-245   Classic zinc finger, C2H2  
jgi|Conpu1|117509|estExt_Genewise1Plus.C_2_t20403   0.0327   183-223   Classic zinc finger, C2H2  
jgi|Conpu1|129795|estExt_Genewise1Plus.C_13_t10013   0.0384   16-42   Classic zinc finger, C2H2  
jgi|Conpu1|133056|estExt_Genewise1Plus.C_200113   0.00397   52-91   Plant C2H2 finger (QALGGH zinc finger)  
  0.0274   17-45   HkH motif-containing C2H2 finger  
jgi|Conpu1|135447|estExt_fgenesh1_pm.C_3_t10064   0.000357   44-94   Classic zinc finger, C2H2  
jgi|Conpu1|139139|estExt_fgenesh1_pm.C_120030   0.0847   195-237   Classic zinc finger, C2H2  
jgi|Conpu1|139381|estExt_fgenesh1_pm.C_130055   0.0202   45-72   Classic zinc finger, C2H2  
jgi|Conpu1|139811|estExt_fgenesh1_pm.C_150004   0.00064   155-182   Classic zinc finger, C2H2  
jgi|Conpu1|140410|estExt_fgenesh1_pm.C_190054   0.000156   226-254   Classic zinc finger, C2H2  
  0.0414   260-309   Classic zinc finger, C2H2  
jgi|Conpu1|143709|estExt_fgenesh1_pg.C_5_t10459   0.00199   1097-1125   Classic zinc finger, C2H2  
  0.0532   1130-1155   Classic zinc finger, C2H2  
jgi|Conpu1|144286|estExt_fgenesh1_pg.C_6_t20014   0.00107   88-153   Classic zinc finger, C2H2  
jgi|Conpu1|144305|estExt_fgenesh1_pg.C_6_t20036   0.00108   89-113   Classic zinc finger, C2H2  
  0.0372   135-157   Classic zinc finger, C2H2  
jgi|Conpu1|146018|estExt_fgenesh1_pg.C_110313   0.00239   542-567   Classic zinc finger, C2H2  
  0.00251   464-489   Classic zinc finger, C2H2  
jgi|Conpu1|146995|estExt_fgenesh1_pg.C_150117   0.0162   42-70   Classic zinc finger, C2H2  
jgi|Conpu1|147878|estExt_fgenesh1_pg.C_210103   0.00834   13-41   Classic zinc finger, C2H2  
jgi|Conpu1|151419|gm1.3410_g   0.0146   185-209   Classic zinc finger, C2H2  
  0.0942   242-276   Classic zinc finger, C2H2  
jgi|Conpu1|152652|gm1.4643_g   0.0797   26-48   Classic zinc finger, C2H2  
jgi|Conpu1|154475|gm1.6466_g   0.0308   27-53   Classic zinc finger, C2H2  
jgi|Conpu1|155460|gm1.7451_g   0.0027   114-140   Classic zinc finger, C2H2  
  0.0877   74-106   Classic zinc finger, C2H2  
jgi|Conpu1|156972|gm1.8963_g   0.0262   3-53   Classic zinc finger, C2H2  
jgi|Conpu1|157324|gm1.9315_g   0.00021   381-428   Classic zinc finger, C2H2  
  0.00101   129-183   Plant C2H2 finger (QALGGH zinc finger)  
  0.00913   486-534   Classic zinc finger, C2H2  
  0.0322   20-48   Classic zinc finger, C2H2  
jgi|Conpu1|158023|gm1.10014_g   0.000618   32-58   Classic zinc finger, C2H2  
jgi|Conpu1|158103|gm1.10094_g   0.0486   10-35   Classic zinc finger, C2H2  
jgi|Conpu1|158521|gm1.10512_g   0.00144   70-114   Classic zinc finger, C2H2  
jgi|Conpu1|159317|gm1.11308_g   0.0794   91-126   Classic zinc finger, C2H2  
jgi|Conpu1|159469|gm1.11460_g   0.0467   41-66   Classic zinc finger, C2H2  
jgi|Conpu1|159995|gm1.11986_g   0.000139   387-412   Classic zinc finger, C2H2  
  0.00268   465-490   Classic zinc finger, C2H2  
jgi|Conpu1|161215|estExt_Genemark1.C_1_t20048   0.000217   687-714   Classic zinc finger, C2H2  
  0.0112   760-787   Classic zinc finger, C2H2  
jgi|Conpu1|162824|estExt_Genemark1.C_2_t20480   0.000174   122-165   Classic zinc finger, C2H2  
  0.00194   75-133   Classic zinc finger, C2H2  
jgi|Conpu1|163061|estExt_Genemark1.C_3_t10173   0.000151   216-244   Classic zinc finger, C2H2  
  0.00201   249-299   Classic zinc finger, C2H2  
jgi|Conpu1|164454|estExt_Genemark1.C_4_t20430   0.00175   307-332   Classic zinc finger, C2H2  
jgi|Conpu1|165374|estExt_Genemark1.C_6_t10288   0.000398   240-266   Classic zinc finger, C2H2  
  0.0779   273-323   Classic zinc finger, C2H2  
jgi|Conpu1|165681|estExt_Genemark1.C_6_t20189   0.000315   90-117   Classic zinc finger, C2H2  
  0.0444   139-158   Classic zinc finger, C2H2  
jgi|Conpu1|169595|estExt_Genemark1.C_170137   0.0122   163-202   HkH motif-containing C2H2 finger  
jgi|Conpu1|170321|estExt_Genemark1.C_220061   0.00116   21-58   Classic zinc finger, C2H2  
jgi|Conpu1|18291|gw1.12.117.1   0.000108   53-97   Classic zinc finger, C2H2  
  0.00218   1-37   Classic zinc finger, C2H2  
  0.00229   78-123   Classic zinc finger, C2H2  
jgi|Conpu1|44783|e_gw1.1.7.1   0.000437   24-50   Classic zinc finger, C2H2  
jgi|Conpu1|45549|e_gw1.1.2615.1   0.000132   66-123   Classic zinc finger, C2H2  
  0.0733   19-78   Classic zinc finger, C2H2  
jgi|Conpu1|53735|e_gw1.5.906.1   0.000203   670-700   Classic zinc finger, C2H2  
jgi|Conpu1|65876|e_gw1.16.405.1   0.0622   26-53   Classic zinc finger, C2H2  
jgi|Conpu1|70647|fgenesh1_pg.3_#_92   0.000293   198-250   Classic zinc finger, C2H2  
jgi|Conpu1|70923|fgenesh1_pg.3_#_368   0.0586   4-32   Classic zinc finger, C2H2  
  0.0736   30-61   Classic zinc finger, C2H2  
jgi|Conpu1|73933|fgenesh1_pg.8_#_49   0.00722   188-208   Classic zinc finger, C2H2  
jgi|Conpu1|83310|fgenesh1_kg.9_#_71_#_isotig08556   0.0113   178-202   Classic zinc finger, C2H2  
jgi|Conpu1|84308|fgenesh1_kg.12_#_37_#_isotig12254   0.00133   26-70   HkH motif-containing C2H2 finger  

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Select to display   Genome       Domains   Proteins
No Yes ALL   3000708 3000708
No Yes Homo sapiens 76_38 Human 10873 2243
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 3948 743
No Yes Gorilla gorilla 76_3.1 Western gorilla 4906 944
No Yes Pongo abelii 76_2 Sumatran orangutan 3610 708
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 4053 744
No Yes Papio anubis 76 Olive baboon 4383 764
No Yes Macaca mulatta 76_1 Rhesus monkey 6298 1208
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7038 1369
No Yes Otolemur garnettii 76_3 Small-eared galago 3626 651
No Yes Microcebus murinus 76_1 Gray mouse lemur 2020 471
No Yes Rattus norvegicus 76_5.0 Norway rat 2770 620
No Yes Mus musculus 76_38 House mouse 6284 1346
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1411 357
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1796 442
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2928 594
No Yes Cavia porcellus 76_3 Domestic guinea pig 1518 400
No Yes Oryctolagus cuniculus 76_2 Rabbit 2337 510
No Yes Ochotona princeps 76 American pika 1450 368
No Yes Tupaia belangeri 76 Northern tree shrew 1530 376
No Yes Sus scrofa 76_10.2 Pig 2758 594
No Yes Bos taurus 76_3.1 Cattle 3268 640
No Yes Ovis aries 76_3.1 Sheep 2282 526
No Yes Vicugna pacos 76_1 Alpaca 1376 329
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2473 538
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2547 539
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2526 567
No Yes Canis familiaris 76_3.1 Dog 3120 672
No Yes Felis catus 76_6.2 Domestic cat 2017 478
No Yes Equus caballus 76_2 Horse 3828 689
No Yes Myotis lucifugus 76_2.0 Little brown bat 1720 443
No Yes Pteropus vampyrus 76_1 Large flying fox 2124 485
No Yes Sorex araneus 76_1 European shrew 1119 297
No Yes Erinaceus europaeus 76 Western European hedgehog 1184 323
No Yes Procavia capensis 76_1 Cape rock hyrax 1899 453
No Yes Loxodonta africana 76_3 African savanna elephant 2079 535
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1956 469
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4229 826
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1666 390
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1226 323
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3509 629
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6103 870
No Yes Ornithorhynchus anatinus 76_5 Platypus 1093 325
No Yes Saccoglossus kowalevskii v3.0   2230 518
No Yes Petromyzon marinus 76_7.0 Sea lamprey 620 197
No Yes Meleagris gallopavo 76_2 Turkey 877 272
No Yes Gallus gallus 76_4 Chicken 963 283
No Yes Anas platyrhynchos 76_1.0 Mallard 860 264
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2478 613
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 788 256
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2607 536
No Yes Anolis carolinensis 76_2.0 Green anole 6509 851
No Yes Xenopus laevis African clawed frog 2006 610
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2705 537
No Yes Latimeria chalumnae 76_1 Coelacanth 1231 376
No Yes Lepisosteus oculatus 76 Spotted gar 1510 417
No Yes Gadus morhua 76_1 Atlantic cod 1205 395
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1265 404
No Yes Takifugu rubripes 76_4 Torafugu 4079 996
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1529 424
No Yes Oryzias latipes 76_1 Japanese medaka 1745 451
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1689 455
No Yes Poecilia formosa 76 Amazon molly 2634 511
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2923 633
No Yes Astyanax mexicanus 76 Mexican tetra 2780 539
No Yes Danio rerio 76_9 Zebrafish 9699 1867
No Yes Oikopleura dioica   259 153
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1494 215
No Yes Ciona intestinalis 76 Vase tunicate 387 143
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1624 331
No Yes Adineta vaga   441 215
No Yes Octopus bimaculoides 280   12514 2144
No Yes Crassostrea gigas 22 Pacific oyster 814 264
No Yes Lottia gigantea Owl limpet 1476 356
No Yes Helobdella robusta   593 283
No Yes Capitella sp. I   1159 377
No Yes Danaus plexippus OGS1.0 Monarch butterfly 996 303
No Yes Heliconius melpomene Postman butterfly 803 260
No Yes Bombyx mori Domestic silkworm 745 318
No Yes Nasonia vitripennis Jewel wasp 374 127
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1273 373
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 250 149
No Yes Linepithema humile v1.1 Argentine ant 682 272
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 706 274
No Yes Solenopsis invicta v.2.2.3 Red fire ant 641 243
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 683 221
No Yes Atta cephalotes v1.1   744 287
No Yes Camponotus floridanus v3.3 Florida carpenter ant 548 215
No Yes Lucilia cuprina Australian sheep blowfly 1068 252
No Yes Drosophila grimshawi 1.3   836 291
No Yes Drosophila willistoni 1.3   765 271
No Yes Drosophila pseudoobscura 2.13   866 305
No Yes Drosophila persimilis 1.3   815 288
No Yes Drosophila suzukii   1012 290
No Yes Drosophila yakuba 1.3   852 292
No Yes Drosophila simulans 1.3   705 263
No Yes Drosophila sechellia 1.3   814 293
No Yes Drosophila melanogaster 76_5 Fruit fly 1591 560
No Yes Drosophila erecta 1.3   844 289
No Yes Drosophila ananassae 1.3   782 271
No Yes Drosophila virilis 1.2   912 300
No Yes Drosophila mojavensis 1.3   811 278
No Yes Megaselia scalaris 22   261 128
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2227 637
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2138 691
No Yes Anopheles darlingi 22 American malaria mosquito 591 220
No Yes Anopheles gambiae 49_3j African malaria mosquito 908 311
No Yes Tribolium castaneum 3.0 Red flour beetle 1062 291
No Yes Pediculus humanus corporis (Early assembly) Human body louse 782 217
No Yes Acyrthosiphon pisum Pea aphid 966 215
No Yes Rhodnius prolixus 22   694 240
No Yes Daphnia pulex Common water flea 480 204
No Yes Strigamia maritima 22   581 201
No Yes Sarcoptes scabiei   196 88
No Yes Tetranychus urticae Two-spotted spider mite 317 146
No Yes Ixodes scapularis (Preliminary) Black-legged tick 777 296
No Yes Pristionchus pacificus   322 194
No Yes Meloidogyne incognita Southern root-knot nematode 238 167
No Yes Meloidogyne hapla   113 76
No Yes Onchocerca volvulus 22   236 112
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 308 159
No Yes Caenorhabditis japonica   207 118
No Yes Caenorhabditis brenneri   324 168
No Yes Caenorhabditis remanei   325 183
No Yes Caenorhabditis elegans 76_235 Roundworm 352 190
No Yes Caenorhabditis briggsae 2   257 139
No Yes Trichinella spiralis 22   187 93
No Yes Hymenolepis microstoma   273 149
No Yes Echinococcus multilocularis   244 122
No Yes Echinococcus granulosus   233 120
No Yes Taenia solium Pork tapeworm 246 133
No Yes Schistosoma mansoni   290 139
No Yes Mnemiopsis leidyi Sea walnut 474 187
No Yes Thelohanellus kitauei   64 46
No Yes Acropora digitifera v1.0   307 114
No Yes Nematostella vectensis 1.0 Starlet sea anemone 880 236
No Yes Hydra vulgaris   350 150
No Yes Amphimedon queenslandica   162 112
No Yes Trichoplax adhaerens   114 62
No Yes Proterospongia sp. ATCC 50818   92 53
No Yes Monosiga brevicollis   54 45
No Yes Sphaeroforma arctica JP610   233 90
No Yes Capsaspora owczarzaki ATCC 30864   57 33
No Yes Conidiobolus coronatus NRRL28638 v1.0   98 80
No Yes Mortierella verticillata NRRL 6337   151 92
No Yes Phycomyces blakesleeanus   191 148
No Yes Rhizopus oryzae RA 99-880   170 116
No Yes Mucor circinelloides   162 115
No Yes Rhizomucor miehei CAU432   132 92
No Yes Malassezia globosa CBS 7966   64 48
No Yes Sporisorium reilianum 22   54 38
No Yes Ustilago maydis   49 34
No Yes Mixia osmundae IAM 14324 v1.0   48 37
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   60 50
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   93 80
No Yes Melampsora laricis-populina   71 60
No Yes Rhodotorula graminis WP1 v1.0   56 36
No Yes Sporobolomyces roseus IAM 13481   29 24
No Yes Microbotryum violaceum 22   55 40
No Yes Wallemia sebi v1.0   43 34
No Yes Sphaerobolus stellatus v1.0   154 130
No Yes Piloderma croceum F 1598 v1.0   79 61
No Yes Serpula lacrymans var. lacrymans S7.9   42 32
No Yes Coniophora puteana   55 47
No Yes Hydnomerulius pinastri v2.0   71 53
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   67 54
No Yes Pisolithus microcarpus 441 v1.0   81 63
No Yes Pisolithus tinctorius Marx 270 v1.0   78 62
No Yes Scleroderma citrinum Foug A v1.0   89 71
No Yes Coprinopsis cinerea okayama7 130 v3   85 60
No Yes Pleurotus ostreatus Oyster mushroom 73 62
No Yes Amanita thiersii Skay4041 v1.0   66 48
No Yes Amanita muscaria Koide v1.0 Fly agaric 100 79
No Yes Galerina marginata v1.0   74 57
No Yes Hebeloma cylindrosporum h7 v2.0   71 56
No Yes Laccaria bicolor S238N-H82   75 58
No Yes Agaricus bisporus var. bisporus   57 44
No Yes Schizophyllum commune   101 88
No Yes Stereum hirsutum FP-91666 SS1 v1.0   73 56
No Yes Heterobasidion annosum   96 77
No Yes Gloeophyllum trabeumv1.0   67 51
No Yes Punctularia strigosozonata v1.0   82 67
No Yes Sebacina vermifera MAFF 305830 v1.0   121 100
No Yes Fomitiporia mediterranea v1.0   75 58
No Yes Tulasnella calospora AL13/4D v1.0   77 67
No Yes Postia placenta   131 103
No Yes Wolfiporia cocos MD-104 SS10 v1.0   73 57
No Yes Fomitopsis pinicolav1.0   80 63
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   82 66
No Yes Phanerochaete chrysosporium RP-78 2.1   56 43
No Yes Dichomitus squalens   73 57
No Yes Trametes versicolor v1.0   68 52
No Yes Tremella mesenterica Witches' butter 44 33
No Yes Daldinia eschscholzii EC12 v1.0   75 62
No Yes Apiospora montagnei NRRL 25634 v1.0   95 79
No Yes Magnaporthe poae ATCC 64411 22   64 51
No Yes Magnaporthe grisea 70-15   68 53
No Yes Podospora anserina   71 55
No Yes Sporotrichum thermophile ATCC 42464   61 51
No Yes Thielavia terrestris NRRL 8126   75 63
No Yes Chaetomium globosum CBS 148.51   58 51
No Yes Neurospora tetrasperma   76 60
No Yes Neurospora discreta FGSC 8579   78 60
No Yes Neurospora crassa OR74A   77 62
No Yes Cryphonectria parasitica Chestnut blight fungus 69 55
No Yes Verticillium albo-atrum VaMs.102   52 43
No Yes Verticillium dahliae VdLs.17   67 56
No Yes Acremonium alcalophilumv 1.0   61 49
No Yes Glomerella graminicola 22   79 61
No Yes Fusarium graminearum   76 59
No Yes Nectria haematococca mpVI   94 75
No Yes Fusarium oxysporum f. sp. lycopersici 4286   89 69
No Yes Fusarium verticillioides 7600   68 56
No Yes Trichoderma asperellum CBS 433.97 v1.0   74 62
No Yes Trichoderma atroviride   73 57
No Yes Trichoderma citrinoviride v1.0   67 52
No Yes Trichoderma reesei 1.2   68 51
No Yes Trichoderma virens Gv29-8   84 63
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   70 54
No Yes Trichoderma harzianum CBS 226.95 v1.0   90 75
No Yes Amorphotheca resinae v1.0 Creosote fungus 63 51
No Yes Botrytis cinerea B05.10   55 45
No Yes Sclerotinia sclerotiorum   69 56
No Yes Blumeria graminis 22   47 36
No Yes Didymella exigua CBS 183.55 v1.0   72 61
No Yes Leptosphaeria maculans 22   58 49
No Yes Setosphaeria turcica v1.0   74 59
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   77 63
No Yes Cochliobolus victoriae FI3 v1.0   80 64
No Yes Cochliobolus carbonum 26-R-13 v1.0   79 64
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 63 51
No Yes Alternaria brassicicola   52 45
No Yes Cochliobolus lunatus m118 v2.0   71 57
No Yes Pyrenophora teres f. teres 22   67 55
No Yes Pyrenophora tritici-repentis   74 56
No Yes Stagonospora nodorum   72 62
No Yes Mycosphaerella graminicola IPO323   60 50
No Yes Zasmidium cellare ATCC 36951 v1.0   93 80
No Yes Dothistroma septosporum   80 70
No Yes Septoria musiva v1.0   68 55
No Yes Mycosphaerella fijiensis CIRAD86   67 56
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   73 62
No Yes Paracoccidioides brasiliensis Pb18   52 41
No Yes Coccidioides posadasii RMSCC 3488   62 47
No Yes Coccidioides immitis RS   73 57
No Yes Ajellomyces dermatitidis SLH14081   60 48
No Yes Histoplasma capsulatum class NAmI strain WU24   55 43
No Yes Microsporum canis CBS 113480   53 39
No Yes Trichophyton equinum CBS 127.97   63 47
No Yes Trichophyton verrucosum HKI 0517   46 37
No Yes Arthroderma benhamiae CBS 112371   45 36
No Yes Trichophyton tonsurans CBS 112818   63 47
No Yes Trichophyton rubrum CBS 118892   62 48
No Yes Uncinocarpus reesii 1704   50 46
No Yes Aspergillus zonatus v1.0   75 60
No Yes Penicillium chrysogenum Wisconsin 54-1255   105 88
No Yes Penicillium chrysogenum v1.0   89 74
No Yes Aspergillus acidus v1.0   94 78
No Yes Aspergillus fumigatus Af293   70 54
No Yes Aspergillus brasiliensis v1.0   97 82
No Yes Aspergillus nidulans FGSC A4   75 60
No Yes Aspergillus sydowii v1.0   116 97
No Yes Aspergillus versicolor v1.0   121 102
No Yes Aspergillus glaucus   82 69
No Yes Aspergillus carbonarius ITEM 5010   74 60
No Yes Neosartorya fischeri NRRL 181   76 62
No Yes Aspergillus terreus NIH2624   68 57
No Yes Aspergillus tubingensis v1.0   81 68
No Yes Aspergillus wentii v1.0   88 74
No Yes Aspergillus oryzae RIB40   46 38
No Yes Aspergillus niger 22   80 66
No Yes Aspergillus niger ATCC 1015   53 42
No Yes Aspergillus flavus NRRL3357   60 51
No Yes Aspergillus clavatus NRRL 1   69 56
No Yes Penicillium marneffei ATCC 18224   83 63
No Yes Tuber melanosporum Mel28 22   61 48
No Yes Tuber melanosporum Vittad Perigord truffle 64 51
No Yes Hansenula polymorpha v2.0   51 40
No Yes Dekkera bruxellensis CBS 2499 v2.0   47 37
No Yes Pichia membranifaciensv1.0   52 42
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   49 40
No Yes Candida dubliniensis CD36   51 40
No Yes Candida tropicalis MYA-3404   51 38
No Yes Candida parapsilosis   50 39
No Yes Candida albicans SC5314   51 40
No Yes Lodderomyces elongisporus NRRL YB-4239   49 38
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   55 44
No Yes Pichia stipitis CBS 6054   51 41
No Yes Candida guilliermondii ATCC 6260   49 40
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   45 38
No Yes Debaromyces hansenii   50 42
No Yes Wickerhamomyces anomalus   59 45
No Yes Pichia pastoris GS115   47 36
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   36 32
No Yes Yarrowia lipolytica CLIB122   50 40
No Yes Candida lusitaniae ATCC 42720   43 35
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   55 40
No Yes Vanderwaltozyma polyspora DSM 70294   55 46
No Yes Candida glabrata CBS138   62 50
No Yes Kluyveromyces thermotolerans CBS 6340   44 35
No Yes Lachancea kluyveri   58 43
No Yes Kluyveromyces waltii   48 37
No Yes Ashbya gossypii ATCC 10895   48 40
No Yes Zygosaccharomyces rouxii   39 29
No Yes Saccharomyces mikatae MIT   53 43
No Yes Saccharomyces paradoxus MIT   54 44
No Yes Saccharomyces cerevisiae 76 Baker's yeast 55 44
No Yes Saccharomyces bayanus MIT   47 42
No Yes Kluyveromyces lactis   45 35
No Yes Schizosaccharomyces cryophilus OY26 22   32 24
No Yes Schizosaccharomyces octosporus yFS286   31 23
No Yes Schizosaccharomyces japonicus yFS275   33 24
No Yes Schizosaccharomyces pombe Fission yeast 34 27
No Yes Catenaria anguillulae PL171 v1.0   59 43
No Yes Allomyces macrogynus ATCC 38327   132 85
No Yes Spizellomyces punctatus DAOM BR117   100 69
No Yes Dictyostelium discoideum   26 20
No Yes Dictyostelium purpureum   22 17
No Yes Entamoeba dispar 1.2   21 13
No Yes Entamoeba invadens 1.2   18 13
No Yes Entamoeba histolytica 1   28 17
No Yes Selaginella moellendorffii   110 82
No Yes Pinus taeda Loblolly pine 84 59
No Yes Picea abies Norway spruce 81 63
No Yes Eucalyptus grandis v201 Rose gum 179 138
No Yes Theobroma cacao B97-61/B2 v1 Cacao 184 157
No Yes Gossypium raimondii v221   401 308
No Yes Citrus clementina v165   221 150
No Yes Citrus sinensis v154 Sweet orange 197 153
No Yes Thellungiella halophila v173   153 121
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 236 197
No Yes Capsella rubella v183   166 135
No Yes Arabidopsis lyrata Lyrate rockcress 163 133
No Yes Arabidopsis thaliana 10 Thale cress 178 136
No Yes Carica papaya Papaya 113 90
No Yes Medicago truncatula Barrel medic 167 129
No Yes Phaseolus vulgaris v186 French bean 220 180
No Yes Glycine max v109 Soybean 327 277
No Yes Cucumis sativus v122 Cucumber 152 129
No Yes Fragaria vesca Wild strawberry 172 136
No Yes Malus domestica v196 Apple 265 209
No Yes Prunus persica v139 Peach 181 142
No Yes Linum usitatissimum v200 Flax 216 167
No Yes Manihot esculenta v147 Cassava 220 167
No Yes Populus trichocarpa v156 Black cottonwood 268 203
No Yes Vitis vinifera Wine grape 117 84
No Yes Mimulus guttatus v140 Spotted monkey flower 152 118
No Yes Solanum lycopersicum v.2.3 Tomato 169 135
No Yes Solanum tuberosum Potato 258 207
No Yes Actinidia chinensis Hongyang   228 194
No Yes Aquilegia coerulea v195   213 153
No Yes Triticum urartu 22   145 108
No Yes Triticum aestivum 22 Bread wheat 318 258
No Yes Aegilops tauschii 22   168 121
No Yes Brachypodium distachyon Stiff brome 175 139
No Yes Oryza barthii 22 African wild rice 194 138
No Yes Oryza meridionalis 22   191 145
No Yes Oryza glumaepatula 22   205 156
No Yes Oryza glaberrima African rice 155 124
No Yes Oryza punctata 22   202 148
No Yes Oryza nivara 22   231 165
No Yes Oryza brachyantha 22 Malo sina 150 116
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 322 273
No Yes Oryza sativa v193 Rice 319 270
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 186 131
No Yes Panicum virgatum v202 Switchgrass 411 311
No Yes Setaria italica v164 Foxtail millet 195 153
No Yes Zea mays subsp. mays Maize 293 223
No Yes Zea mays v181 Maize 311 239
No Yes Sorghum bicolor Sorghum 214 163
No Yes Musa balbisiana Balbis banana 261 223
No Yes Musa acuminata 22 Wild Malaysian banana 243 204
No Yes Amborella trichopoda 22   113 90
No Yes Physcomitrella patens   85 63
No Yes Coccomyxa subellipsoidea sp. C-169 v2   19 11
No Yes Asterochloris sp. Cgr/DA1pho v1.0   19 10
No Yes Chlorella variabilis sp. NC64A   14 9
No Yes Chlorella vulgaris   19 11
No Yes Volvox carteri f. nagariensis   13 11
No Yes Volvox carteri v199   13 11
No Yes Chlamydomonas reinhardtii 4.0   15 13
No Yes Ostreococcus sp. RCC809   14 10
No Yes Ostreococcus lucimarinus CCE9901   14 10
No Yes Ostreococcus tauri   10 8
No Yes Bathycoccus prasinos   151 58
No Yes Micromonas sp. RCC299   24 16
No Yes Micromonas pusilla CCMP1545 v3.0   22 13
No Yes Cyanidioschyzon merolae strain 10D 22   18 12
No Yes Cyanidioschyzon merolae   18 12
No Yes Porphyridium purpureum 02_2012   98 66
No Yes Thecamonas trahens ATCC 50062   21 14
No Yes Bigelowiella natans CCMP2755 22   192 112
No Yes Giardia lamblia 2.3   10 10
No Yes Cyanophora paradoxa   25 19
No Yes Leishmania mexicana 2.4   13 12
No Yes Leishmania major strain Friedlin   12 11
No Yes Leishmania infantum JPCM5 2.4   12 11
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   14 11
No Yes Trypanosoma vivax   49 41
No Yes Trypanosoma cruzi strain CL Brener   11 9
No Yes Trypanosoma congolense 2.4   55 47
No Yes Trypanosoma brucei gambiense v4.1   15 14
No Yes Trypanosoma brucei TREU927 v4.1   13 12
No Yes Ectocarpus siliculosus   24 18
No Yes Aureococcus anophagefferens   7 6
No Yes Albugo laibachii 22   41 33
No Yes Pythium iwayamai DAOM BR242034 22   63 42
No Yes Pythium arrhenomanes ATCC 12531 22   40 27
No Yes Pythium ultimum v1.7-2   82 49
No Yes Pythium aphanidermatum DAOM BR444 22   46 30
No Yes Pythium irregulare DAOM BR486 22   69 43
No Yes Pythium vexans DAOM BR484 22   55 36
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 70 44
No Yes Phytophthora sojae 1.1   66 41
No Yes Phytophthora infestans T30-4   78 49
No Yes Phytophthora capsici   70 42
No Yes Hyaloperonospora arabidopsidis 22   43 27
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 8
No Yes Fragilariopsis cylindrus   26 24
No Yes Thalassiosira pseudonana CCMP1335   14 13
No Yes Perkinsus marinus ATCC 50983   51 41
No Yes Paramecium tetraurelia   59 45
No Yes Tetrahymena thermophila SB210 1   36 23
No Yes Ichthyophthirius multifiliis strain G5   7 6
No Yes Cryptosporidium hominis   10 7
No Yes Cryptosporidium muris   14 11
No Yes Cryptosporidium parvum Iowa II   13 10
No Yes Neospora caninum   14 11
No Yes Toxoplasma gondii VEG   13 12
No Yes Toxoplasma gondii ME49   18 13
No Yes Toxoplasma gondii GT1   13 12
No Yes Babesia bovis T2Bo   22 18
No Yes Theileria parva   10 10
No Yes Theileria annulata   12 10
No Yes Plasmodium falciparum 3D7   10 8
No Yes Plasmodium vivax SaI-1 7.0   11 9
No Yes Plasmodium knowlesi strain H   10 9
No Yes Plasmodium yoelii ssp. yoelii 1   12 9
No Yes Plasmodium chabaudi   12 9
No Yes Plasmodium berghei ANKA   11 9
No Yes Symbiodinium minutum clade B1 v1.2   28 25
No Yes Naegleria gruberi   15 10
No Yes Trichomonas vaginalis   17 11
No Yes Guillardia theta CCMP2712 v1.0   28 22
No Yes Emiliania huxleyi CCMP1516   56 44
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes Babela massiliensis   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Pantoea sp. At-9b   6 2
No Yes Pseudomonas sp. UW4   4 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   3 3
No Yes Pyrolobus fumarii 1A   1 1
No Yes Ignisphaera aggregans DSM 17230   2 2
No Yes Acidianus hospitalis W1   2 2
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   2 2
No Yes Sulfolobus solfataricus P2   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   2 2
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3492 796
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1223 428
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 995 341
No Yes Ascaris suum Victoria/Ghent Pig roundworm 186 101
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 316 164
No Yes Cryptococcus neoformans var. grubii H99   37 26
No Yes Cryptococcus neoformans B-3501A   41 31
No Yes Cryptococcus neoformans JEC21   29 22
No Yes Paracoccidioides brasiliensis Pb01   51 41
No Yes Paracoccidioides brasiliensis Pb03   48 38
No Yes Coccidioides posadasii str. Silveira   61 46
No Yes Coccidioides immitis RMSCC 3703   53 42
No Yes Coccidioides immitis RMSCC 2394   60 46
No Yes Coccidioides immitis H538.4   46 35
No Yes Ajellomyces dermatitidis ER-3   60 49
No Yes Histoplasma capsulatum H143   53 40
No Yes Histoplasma capsulatum H88   62 47
No Yes Histoplasma capsulatum G186AR   57 42
No Yes Aspergillus fumigatus A1163   72 56
No Yes Candida albicans WO-1   48 37
No Yes Saccharomyces cerevisiae UC5   48 39
No Yes Saccharomyces cerevisiae PW5   44 36
No Yes Saccharomyces cerevisiae FL100   40 31
No Yes Saccharomyces cerevisiae CLIB382   3 3
No Yes Saccharomyces cerevisiae CLIB324   32 26
No Yes Saccharomyces cerevisiae CBS7960   39 30
No Yes Saccharomyces cerevisiae YJM269   41 35
No Yes Saccharomyces cerevisiae T7   56 44
No Yes Saccharomyces cerevisiae FostersB   42 34
No Yes Saccharomyces cerevisiae FostersO   38 31
No Yes Saccharomyces cerevisiae VL3   48 36
No Yes Saccharomyces cerevisiae Vin13   41 35
No Yes Saccharomyces cerevisiae LalvinQA23   36 32
No Yes Saccharomyces cerevisiae AWRI796   48 38
No Yes Saccharomyces cerevisiae Sigma1278b   56 44
No Yes Saccharomyces cerevisiae W303   54 43
No Yes Saccharomyces cerevisiae JAY291   54 43
No Yes Saccharomyces cerevisiae AWRI1631   40 32
No Yes Saccharomyces cerevisiae YPS163   24 19
No Yes Saccharomyces cerevisiae M22   23 19
No Yes Saccharomyces cerevisiae T73   29 25
No Yes Saccharomyces cerevisiae CLIB215   31 29
No Yes Saccharomyces cerevisiae Y10   12 12
No Yes Saccharomyces cerevisiae YJM789   56 44
No Yes Saccharomyces cerevisiae YJM789   52 43
No Yes Saccharomyces cerevisiae RM11-1a   55 43
No Yes Saccharomyces cerevisiae RM11-1a   55 43
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 55 44
No Yes Schizosaccharomyces pombe 972h-   33 26
No Yes Batrachochytrium dendrobatidis JEL423   73 49
No Yes Batrachochytrium dendrobatidis JAM81   69 47
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 161 132
No Yes Hordeum vulgare 22 Domesticated barley 316 206
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 236 190
No Yes Trypanosoma brucei Lister 427 v4.1   17 16
No Yes Neospora caninum Nc-Liverpool 6.2   14 11
No Yes Plasmodium falciparum HB3   10 8
No Yes Plasmodium falciparum Dd2   7 5
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   13 13
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   3 3
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   3 3
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   2 2
No Yes Sulfolobus islandicus M.16.4   2 2
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Natronococcus occultus SP4   2 2
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 11212 2302
No Yes Homo sapiens (NCBI version) Human 6518 1203
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3574 698
No Yes Heliconius numata (Incomplete)   146 95
No Yes Loa loa v3.3 (Request) Eye worm 468 274
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 193 115
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 435 175
No Yes Moniliophthora perniciosa FA553 (Genome survey)   19 18
No Yes Encephalitozoon intestinalis (endoparasite)   15 11
No Yes Encephalitozoon cuniculi (endoparasite)   14 11
No Yes Picea sitchensis (Incomplete) Sitka spruce 9 8
No Yes Lotus japonicus (Early assembly)   147 124
No Yes Malus x domestica (Duplicate) Apple 265 209
No Yes Ricinus communis (Early assembly) Castor bean 137 101
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   287 236
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 168 134
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 169 135
No Yes Phoenix dactylifera (Early draft) Date palm 52 41
No Yes Homo sapiens 69_37 Human 4393 801
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 3707 696
No Yes Gorilla gorilla 69_3.1 Western gorilla 3478 682
No Yes Pongo abelii 69_2 Sumatran orangutan 3417 673
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3499 657
No Yes Macaca mulatta 69_1 Rhesus monkey 3738 723
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3611 657
No Yes Otolemur garnettii 69_3 Small-eared galago 3496 629
No Yes Microcebus murinus 69_1 Gray mouse lemur 2020 471
No Yes Rattus norvegicus 69_3.4 Norway rat 2465 564
No Yes Mus musculus 69_38 House mouse 3610 702
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1407 356
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1708 423
No Yes Cavia porcellus 69_3 Domestic guinea pig 1359 367
No Yes Oryctolagus cuniculus 69_2 Rabbit 1442 368
No Yes Ochotona princeps 69 American pika 1450 368
No Yes Tupaia belangeri 69 Northern tree shrew 1530 376
No Yes Sus scrofa 69_10.2 Pig 2491 519
No Yes Bos taurus 69_3.1 Cattle 2866 565
No Yes Vicugna pacos 69_1 Alpaca 1376 329
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2468 537
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2538 536
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2090 480
No Yes Canis familiaris 69_3.1 Dog 2741 571
No Yes Felis catus 69 Domestic cat 1827 424
No Yes Equus caballus 69_2 Horse 3057 582
No Yes Myotis lucifugus 69_2.0 Little brown bat 1572 405
No Yes Pteropus vampyrus 69_1 Large flying fox 2121 484
No Yes Sorex araneus 69_1 European shrew 1119 297
No Yes Erinaceus europaeus 69 Western European hedgehog 1184 323
No Yes Procavia capensis 69_1 Cape rock hyrax 1897 452
No Yes Loxodonta africana 69_3 African savanna elephant 1436 383
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1956 469
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1797 449
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1666 390
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1221 322
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3317 572
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 5882 829
No Yes Ornithorhynchus anatinus 69_5 Platypus 1002 297
No Yes Petromyzon marinus 69_7.0 Sea lamprey 548 174
No Yes Meleagris gallopavo 69_2 Turkey 759 235
No Yes Gallus gallus 69_2 Chicken 991 261
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2414 590
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2371 483
No Yes Anolis carolinensis 69_2.0 Green anole 5846 744
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2325 443
No Yes Latimeria chalumnae 69_1 Coelacanth 1071 313
No Yes Gadus morhua 69_1 Atlantic cod 1011 334
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1165 366
No Yes Takifugu rubripes 69_4 Torafugu 1284 361
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1341 364
No Yes Oryzias latipes 69_1 Japanese medaka 1463 383
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1688 454
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2520 511
No Yes Danio rerio 69_9 Zebrafish 7070 1273
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 547 116
No Yes Ciona intestinalis 69 Vase tunicate 375 140
No Yes Drosophila melanogaster 69_5 Fruit fly 820 267
No Yes Caenorhabditis elegans 69_215 Roundworm 220 118
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 55 44
No Yes Arabidopsis thaliana 10 Thale cress 147 115
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Core Eukaryotic Genes 458 (CEGMA)   13 8
No Yes Crater Hills (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 3
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   5 4
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes NCBI 2017_08 genome   1502267 352898
No Yes Protozoadb 2010_08 (Protozoadb)   462 356
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   92266 23815
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   7 7
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   732602 249271
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   793 563
No Yes NCBI plasmid sequences (Plasmids)   11 9
No Yes NCBI viral sequences (Viral)   45 41
No Yes PDB chains (SCOP 1.75) (PDB)   212 173
No Yes Protein Data Bank (all PDB sequenc)   558 421
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1126 1112
No Yes TargetDB (Targets)   948 499
No Yes UniProt viral sequences (Viral)   30 25

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