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DNA-binding pseudobarrel domain superfamily domain assignments
in
Glycine max v109

Assignment details

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Glycine max v109 has 186 significant domains in 164 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma01g00510.1|PACid:16242917   4.45e-43   103-243   B3 DNA binding domain  
Glyma01g05030.1|PACid:16243455   0.0000000569   48-160   B3 DNA binding domain  
Glyma01g11670.1|PACid:16243981   7.46e-23   3-90   B3 DNA binding domain  
Glyma01g22260.1|PACid:16244231   2.62e-29   203-311   B3 DNA binding domain  
Glyma01g25270.1|PACid:16244438   2.62e-38   66-205   B3 DNA binding domain  
Glyma01g25270.2|PACid:16244439   2.62e-38   66-205   B3 DNA binding domain  
Glyma01g25270.3|PACid:16244440   1.12e-38   66-205   B3 DNA binding domain  
Glyma01g28020.1|PACid:16244623   0.000000902   128-225   B3 DNA binding domain  
Glyma01g28030.1|PACid:16244624   0.000000569   81-177   B3 DNA binding domain  
Glyma01g28040.1|PACid:16244625   0.00000275   82-172   B3 DNA binding domain  
Glyma01g28050.1|PACid:16244626   0.000000412   18-114   B3 DNA binding domain  
Glyma01g32810.1|PACid:16244986   9.29e-19   230-333   B3 DNA binding domain  
Glyma01g39390.1|PACid:16245710   0.000000726   72-165   B3 DNA binding domain  
Glyma01g45640.1|PACid:16246437   7.26e-23   53-150   B3 DNA binding domain  
Glyma02g11060.1|PACid:16247693   1.11e-28   208-324   B3 DNA binding domain  
Glyma02g36090.1|PACid:16249204   2.09e-31   70-183   B3 DNA binding domain  
Glyma02g40280.1|PACid:16249662   0.0000000000000011   239-329   B3 DNA binding domain  
Glyma02g40400.1|PACid:16249676   1e-22   76-170   B3 DNA binding domain  
Glyma02g40650.1|PACid:16249707   2.75e-49   112-257   B3 DNA binding domain  
Glyma02g40650.2|PACid:16249708   2.49e-49   112-257   B3 DNA binding domain  
Glyma02g45100.1|PACid:16250234   4.05e-49   114-258   B3 DNA binding domain  
Glyma02g46090.1|PACid:16250356   0.000000000000235   6-117   B3 DNA binding domain  
Glyma03g04330.1|PACid:16251084   1.1e-18   256-359   B3 DNA binding domain  
Glyma03g17450.1|PACid:16251876   6.02e-38   117-255   B3 DNA binding domain  
Glyma03g25330.1|PACid:16252303   0.0000000432   38-136   B3 DNA binding domain  
Glyma03g35700.1|PACid:16253450   3.01e-32   22-129   B3 DNA binding domain  
Glyma03g36710.1|PACid:16253571   1.27e-36   36-173   B3 DNA binding domain  
Glyma03g40650.1|PACid:16254040   1.16e-20   2-80   B3 DNA binding domain  
  0.000589   154-208   B3 DNA binding domain  
Glyma03g41920.1|PACid:16254194   5.76e-40   105-243   B3 DNA binding domain  
Glyma03g42300.1|PACid:16254247   5.49e-29   35-141   B3 DNA binding domain  
Glyma04g04030.1|PACid:16254791   7.65e-24   125-222   B3 DNA binding domain  
Glyma04g16680.1|PACid:16256057   0.00000000000000687   77-172   B3 DNA binding domain  
Glyma04g24640.1|PACid:16256300   0.000000000000184   54-166   B3 DNA binding domain  
Glyma04g36750.1|PACid:16256971   2.55e-18   27-125   B3 DNA binding domain  
  0.00000000353   531-596   B3 DNA binding domain  
Glyma04g37760.1|PACid:16257086   8.89e-40   138-271   B3 DNA binding domain  
Glyma04g43350.1|PACid:16257749   1.28e-29   114-228   B3 DNA binding domain  
Glyma04g43620.1|PACid:16257788   2.75e-19   3-79   B3 DNA binding domain  
  5.69e-17   137-226   B3 DNA binding domain  
Glyma05g27580.1|PACid:16259834   1.05e-48   112-256   B3 DNA binding domain  
Glyma05g36430.1|PACid:16260906   9.16e-42   121-260   B3 DNA binding domain  
Glyma05g38540.1|PACid:16261168   2.09e-40   156-289   B3 DNA binding domain  
Glyma05g38540.2|PACid:16261169   2.09e-40   156-289   B3 DNA binding domain  
Glyma05g38540.3|PACid:16261170   1.83e-40   156-289   B3 DNA binding domain  
Glyma06g04190.1|PACid:16261657   0.000000000000314   813-891   B3 DNA binding domain  
Glyma06g04200.1|PACid:16261660   8.44e-24   126-221   B3 DNA binding domain  
Glyma06g11320.1|PACid:16262536   1.7e-19   5-93   B3 DNA binding domain  
Glyma06g17320.1|PACid:16263270   8.89e-40   138-271   B3 DNA binding domain  
Glyma06g17320.2|PACid:16263271   7.98e-40   138-271   B3 DNA binding domain  
Glyma06g23040.1|PACid:16263861   0.000000000000687   30-141   B3 DNA binding domain  
Glyma07g05380.1|PACid:16266276   1.96e-29   57-149   B3 DNA binding domain  
Glyma07g06060.1|PACid:16266361   3.66e-41   66-205   B3 DNA binding domain  
Glyma07g15640.1|PACid:16267393   3.79e-42   118-258   B3 DNA binding domain  
Glyma07g15640.2|PACid:16267394   3.66e-42   115-255   B3 DNA binding domain  
Glyma07g16170.1|PACid:16267457   5.89e-38   111-249   B3 DNA binding domain  
Glyma07g19380.1|PACid:16267767   4.32e-16   2-85   B3 DNA binding domain  
Glyma07g21160.1|PACid:16267883   2.35e-24   293-394   B3 DNA binding domain  
  5.69e-24   3-97   B3 DNA binding domain  
Glyma07g32300.1|PACid:16268480   3.4e-43   128-244   B3 DNA binding domain  
Glyma07g35040.1|PACid:16268769   0.0000000000000471   43-136   B3 DNA binding domain  
Glyma07g40270.1|PACid:16269382   2.22e-40   120-249   B3 DNA binding domain  
Glyma08g01100.1|PACid:16269526   2.75e-40   150-283   B3 DNA binding domain  
Glyma08g01100.2|PACid:16269527   2.35e-40   58-191   B3 DNA binding domain  
Glyma08g01100.3|PACid:16269528   0.000000000144   11-82   B3 DNA binding domain  
Glyma08g03140.1|PACid:16269782   2.09e-40   121-260   B3 DNA binding domain  
Glyma08g03140.2|PACid:16269783   2.09e-40   121-260   B3 DNA binding domain  
Glyma08g10550.1|PACid:16270663   1.15e-48   112-256   B3 DNA binding domain  
Glyma08g10550.2|PACid:16270664   1.15e-48   112-256   B3 DNA binding domain  
Glyma08g44640.1|PACid:16273838   1.49e-27   18-115   B3 DNA binding domain  
  1.24e-17   189-278   B3 DNA binding domain  
Glyma08g44650.1|PACid:16273839   6.47e-19   5-81   B3 DNA binding domain  
  0.00000000053   204-270   B3 DNA binding domain  
Glyma08g47240.1|PACid:16274136   8.83e-24   562-658   B3 DNA binding domain  
Glyma09g08350.1|PACid:16275193   1.83e-44   64-203   B3 DNA binding domain  
Glyma09g15670.1|PACid:16275699   0.0000451   11-42   B3 DNA binding domain  
Glyma09g18790.1|PACid:16275874   1.75e-23   187-283   B3 DNA binding domain  
  0.000000000000171   4-65   B3 DNA binding domain  
Glyma09g20060.1|PACid:16275911   7.46e-22   13-107   B3 DNA binding domain  
  1.37e-20   166-264   B3 DNA binding domain  
Glyma09g20280.1|PACid:16275915   6.67e-16   2-78   B3 DNA binding domain  
Glyma10g06080.1|PACid:16278741   5.62e-29   108-215   B3 DNA binding domain  
Glyma10g08860.1|PACid:16279028   9.94e-33   43-155   B3 DNA binding domain  
Glyma10g17480.1|PACid:16279604   0.00000000000000379   48-152   B3 DNA binding domain  
Glyma10g20520.1|PACid:16279688   0.00000000216   35-126   B3 DNA binding domain  
Glyma10g34760.1|PACid:16280958   9.16e-29   170-283   B3 DNA binding domain  
Glyma10g42780.1|PACid:16281911   0.00000000000000216   16-100   B3 DNA binding domain  
Glyma10g42790.1|PACid:16281912   8.04e-16   9-90   B3 DNA binding domain  
Glyma11g05870.1|PACid:16282832   0.00000000151   153-266   B3 DNA binding domain  
Glyma11g13200.1|PACid:16283722   0.0000000104   89-186   B3 DNA binding domain  
Glyma11g13200.2|PACid:16283723   0.0000000104   89-186   B3 DNA binding domain  
Glyma11g13210.1|PACid:16283724   2.94e-24   2-97   B3 DNA binding domain  
  3.34e-24   291-391   B3 DNA binding domain  
Glyma11g13210.2|PACid:16283725   2.94e-24   264-364   B3 DNA binding domain  
  9.22e-17   2-70   B3 DNA binding domain  
Glyma11g13220.1|PACid:16283726   2.62e-21   326-430   B3 DNA binding domain  
  3.73e-17   29-122   B3 DNA binding domain  
Glyma11g13220.2|PACid:16283727   1.96e-21   271-375   B3 DNA binding domain  
  2.94e-17   29-122   B3 DNA binding domain  
Glyma11g13220.3|PACid:16283728   1.94e-17   29-122   B3 DNA binding domain  
Glyma11g13230.1|PACid:16283729   8.63e-18   2-78   B3 DNA binding domain  
Glyma11g13350.1|PACid:16283742   1.08e-18   7-104   B3 DNA binding domain  
  0.0000255   257-331   B3 DNA binding domain  
Glyma11g15910.1|PACid:16284061   1.18e-44   134-253   B3 DNA binding domain  
Glyma11g20490.1|PACid:16284466   1.26e-29   102-210   B3 DNA binding domain  
Glyma11g31270.1|PACid:16285031   0.0000000126   1-62   B3 DNA binding domain  
Glyma11g31940.1|PACid:16285100   3.14e-49   112-257   B3 DNA binding domain  
Glyma12g05240.1|PACid:16286473   8.63e-19   7-102   B3 DNA binding domain  
Glyma12g05240.2|PACid:16286474   8.63e-19   7-102   B3 DNA binding domain  
Glyma12g05250.1|PACid:16286475   2.16e-24   295-395   B3 DNA binding domain  
  5.89e-23   2-97   B3 DNA binding domain  
Glyma12g05250.2|PACid:16286476   1.96e-24   290-390   B3 DNA binding domain  
  5.89e-23   2-97   B3 DNA binding domain  
Glyma12g05250.3|PACid:16286477   3.14e-23   2-97   B3 DNA binding domain  
Glyma12g05250.4|PACid:16286478   1.96e-23   2-97   B3 DNA binding domain  
Glyma12g05260.1|PACid:16286479   5.1e-16   16-109   B3 DNA binding domain  
Glyma12g07560.1|PACid:16286759   1.31e-44   158-277   B3 DNA binding domain  
Glyma12g08110.1|PACid:16286827   8.5e-30   105-210   B3 DNA binding domain  
Glyma12g28550.1|PACid:16288180   1.31e-43   109-247   B3 DNA binding domain  
Glyma12g29280.1|PACid:16288273   7.06e-44   166-287   B3 DNA binding domain  
Glyma12g29280.2|PACid:16288274   5.23e-44   21-142   B3 DNA binding domain  
Glyma12g29280.3|PACid:16288275   6.93e-44   153-274   B3 DNA binding domain  
Glyma12g29720.1|PACid:16288327   3.53e-29   104-210   B3 DNA binding domain  
Glyma13g02410.1|PACid:16289434   2.62e-29   109-222   B3 DNA binding domain  
Glyma13g17270.1|PACid:16290589   2.62e-40   64-215   B3 DNA binding domain  
Glyma13g20370.1|PACid:16290957   6.02e-29   109-218   B3 DNA binding domain  
Glyma13g20370.2|PACid:16290958   6.02e-29   109-218   B3 DNA binding domain  
Glyma13g24240.1|PACid:16291395   3.53e-43   133-253   B3 DNA binding domain  
Glyma13g29320.1|PACid:16291978   4.58e-49   112-256   B3 DNA binding domain  
Glyma13g29320.2|PACid:16291979   4.05e-49   112-256   B3 DNA binding domain  
Glyma13g30750.1|PACid:16292146   4.84e-27   151-264   B3 DNA binding domain  
Glyma13g30750.2|PACid:16292147   8.63e-43   151-265   B3 DNA binding domain  
Glyma13g31970.1|PACid:16292309   8.11e-20   333-435   B3 DNA binding domain  
Glyma13g40030.1|PACid:16293233   3.14e-29   105-211   B3 DNA binding domain  
Glyma13g40310.1|PACid:16293267   4.58e-37   167-255   B3 DNA binding domain  
Glyma14g02670.1|PACid:16294117   0.00000000000785   44-150   B3 DNA binding domain  
Glyma14g03650.1|PACid:16294246   2.88e-47   114-260   B3 DNA binding domain  
Glyma14g03650.2|PACid:16294247   2.75e-47   114-260   B3 DNA binding domain  
Glyma14g06030.1|PACid:16294527   0.00000000000000314   5-100   B3 DNA binding domain  
Glyma14g08630.1|PACid:16294854   2.55e-19   21-106   B3 DNA binding domain  
  0.0000000000235   271-356   B3 DNA binding domain  
Glyma14g08640.1|PACid:16294855   1.35e-23   215-316   B3 DNA binding domain  
  1.47e-18   3-90   B3 DNA binding domain  
Glyma14g33730.1|PACid:16296329   2.49e-16   108-185   B3 DNA binding domain  
Glyma14g38490.1|PACid:16296832   0.0000000000419   214-305   B3 DNA binding domain  
Glyma14g38940.1|PACid:16296878   2.75e-49   112-257   B3 DNA binding domain  
Glyma14g40540.1|PACid:16297069   3.01e-46   136-276   B3 DNA binding domain  
Glyma15g07350.1|PACid:16297945   7.46e-20   295-397   B3 DNA binding domain  
Glyma15g08540.1|PACid:16298095   2.49e-42   142-252   B3 DNA binding domain  
Glyma15g09750.1|PACid:16298234   8.76e-47   112-259   B3 DNA binding domain  
Glyma15g19980.1|PACid:16299380   1.83e-44   116-255   B3 DNA binding domain  
Glyma16g00220.1|PACid:16300944   4.05e-41   109-248   B3 DNA binding domain  
Glyma16g01950.1|PACid:16301154   7.46e-30   191-299   B3 DNA binding domain  
Glyma16g02650.1|PACid:16301238   1.7e-41   101-242   B3 DNA binding domain  
Glyma16g05110.1|PACid:16301538   1.35e-25   11-109   B3 DNA binding domain  
  7.46e-23   203-309   B3 DNA binding domain  
Glyma16g05480.1|PACid:16301580   1.28e-20   185-284   B3 DNA binding domain  
Glyma17g05220.1|PACid:16304477   3.14e-43   116-255   B3 DNA binding domain  
Glyma17g20180.1|PACid:16306128   2.75e-21   57-146   B3 DNA binding domain  
Glyma17g36470.1|PACid:16307244   7.06e-24   242-343   B3 DNA binding domain  
  3.73e-22   19-117   B3 DNA binding domain  
Glyma17g36490.1|PACid:16307246   9.42e-21   5-82   B3 DNA binding domain  
  0.000000000000275   276-366   B3 DNA binding domain  
Glyma17g37580.1|PACid:16307359   1.57e-46   138-279   B3 DNA binding domain  
Glyma18g05330.1|PACid:16307991   4.58e-48   113-257   B3 DNA binding domain  
Glyma18g05840.1|PACid:16308040   1.24e-20   336-438   B3 DNA binding domain  
Glyma18g22670.1|PACid:16309256   0.000000000000334   37-149   B3 DNA binding domain  
Glyma18g30690.1|PACid:16309436   3.53e-26   13-115   B3 DNA binding domain  
Glyma18g30700.1|PACid:16309437   4.32e-18   2-81   B3 DNA binding domain  
Glyma18g38490.1|PACid:16309902   7.85e-24   519-615   B3 DNA binding domain  
Glyma18g40180.1|PACid:16310033   4.71e-38   110-248   B3 DNA binding domain  
Glyma19g27340.1|PACid:16312971   0.00000000000000392   1-83   B3 DNA binding domain  
Glyma19g27950.1|PACid:16313030   1.55e-25   10-108   B3 DNA binding domain  
  0.000000000000824   163-259   B3 DNA binding domain  
Glyma19g38340.1|PACid:16314191   4.45e-31   1-109   B3 DNA binding domain  
Glyma19g39340.1|PACid:16314303   1.31e-36   67-206   B3 DNA binding domain  
Glyma19g45090.1|PACid:16314994   1.2e-29   88-178   B3 DNA binding domain  
Glyma20g01130.1|PACid:16315121   2.16e-24   291-392   B3 DNA binding domain  
  5.49e-24   3-97   B3 DNA binding domain  
Glyma20g04730.1|PACid:16315501   1.44e-18   5-97   B3 DNA binding domain  
Glyma20g24210.1|PACid:16316638   0.00000000000000353   13-97   B3 DNA binding domain  
  0.00104   200-249   B3 DNA binding domain  
Glyma20g24220.1|PACid:16316639   0.0000000000000432   1-85   B3 DNA binding domain  
  0.0000000000051   161-240   B3 DNA binding domain  
Glyma20g24230.1|PACid:16316640   5.3e-17   2-85   B3 DNA binding domain  
Glyma20g32040.1|PACid:16317570   7.19e-29   111-217   B3 DNA binding domain  
Glyma20g32730.1|PACid:16317646   8.24e-29   176-293   B3 DNA binding domain  
Glyma20g39140.1|PACid:16318372   2.49e-27   121-218   B3 DNA binding domain  
 
Weak hits:
Glyma19g03000.1|PACid:16311724   0.0863   609-689   B3 DNA binding domain  
Glyma19g05970.1|PACid:16312011   0.0353   931-992   B3 DNA binding domain  
Glyma19g06020.1|PACid:16312016   0.00012   25-113   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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