SUPERFAMILY 1.75 HMM library and genome assignments server

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RING/U-box superfamily domain assignments
in
Heterocephalus glaber v1.7-2

Assignment details

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Heterocephalus glaber v1.7-2 has 326 significant domains in 285 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000170447   0.0000000000221   228-297   RING finger domain, C3HC4  
HGL_H00000216225-1   1.99e-31   1-83   RING finger domain, C3HC4  
HGL_H00000216225-2   9.19e-40   20-105   RING finger domain, C3HC4  
HGL_H00000216420-1   0.00000521   213-255   RING finger domain, C3HC4  
HGL_H00000216420-2   0.00000271   267-315   RING finger domain, C3HC4  
HGL_H00000217169   0.0000232   267-305   RING finger domain, C3HC4  
HGL_H00000217173   5.09e-18   243-337   U-box  
  0.00000168   478-530   RING finger domain, C3HC4  
HGL_H00000217740-1   0.0000000000053   1-44   RING finger domain, C3HC4  
HGL_H00000217740-2   0.00000103   1-41   RING finger domain, C3HC4  
HGL_H00000219548   1.85e-24   220-299   U-box  
HGL_H00000220509   0.0000883   847-883   RING finger domain, C3HC4  
HGL_H00000225873   0.000000000109   302-354   RING finger domain, C3HC4  
HGL_H00000227451-1   4.5e-20   386-490   RING finger domain, C3HC4  
HGL_H00000227451-2   0.000000000777   220-289   RING finger domain, C3HC4  
  0.00198   366-397   RING finger domain, C3HC4  
HGL_H00000227524   0.0000000000194   121-168   U-box  
HGL_H00000229268   2.24e-37   175-283   Zf-UBP  
HGL_H00000231524   0.000000000167   28-80   RING finger domain, C3HC4  
HGL_H00000233630   0.000000000000017   39-107   RING finger domain, C3HC4  
HGL_H00000237455   0.0000000000000193   610-671   RING finger domain, C3HC4  
HGL_H00000238647   1.1e-24   426-502   Variant RING domain  
HGL_H00000240159   9.84e-19   74-134   RING finger domain, C3HC4  
HGL_H00000242719-1   0.000000000000546   78-137   RING finger domain, C3HC4  
HGL_H00000242719-2   1.65e-19   98-144   RING finger domain, C3HC4  
HGL_H00000244061   0.00000000000000928   23-73   RING finger domain, C3HC4  
HGL_H00000244360   0.0000000000000303   12-81   RING finger domain, C3HC4  
HGL_H00000252108-1   6.18e-28   977-1061   U-box  
HGL_H00000253571-1   0.000000000187   112-149   RING finger domain, C3HC4  
HGL_H00000253571-2   0.00000000000000353   281-328   RING finger domain, C3HC4  
HGL_H00000253571-3   1.13e-20   412-460   RING finger domain, C3HC4  
HGL_H00000254436-1   4.37e-20   55-122   RING finger domain, C3HC4  
  0.0000128   121-156   RING finger domain, C3HC4  
HGL_H00000254436-2   3.53e-21   6-80   RING finger domain, C3HC4  
HGL_H00000254436-3   3.06e-19   5-79   RING finger domain, C3HC4  
HGL_H00000254816   8.25e-17   6-78   RING finger domain, C3HC4  
HGL_H00000255499   3.89e-20   247-301   RING finger domain, C3HC4  
HGL_H00000255977-1   0.00000000000795   24-91   RING finger domain, C3HC4  
HGL_H00000255977-2   0.000000000000183   217-285   RING finger domain, C3HC4  
HGL_H00000255977-3   0.00000000000265   280-348   RING finger domain, C3HC4  
HGL_H00000255977-5   0.0000000000778   250-320   RING finger domain, C3HC4  
HGL_H00000255977-6   0.000000000000636   141-208   RING finger domain, C3HC4  
HGL_H00000255977-7   0.000000000000636   141-208   RING finger domain, C3HC4  
HGL_H00000255977-8   0.0000000198   256-352   RING finger domain, C3HC4  
HGL_H00000256257   2.29e-20   64-132   RING finger domain, C3HC4  
HGL_H00000256649   0.00000111   23-56   RING finger domain, C3HC4  
HGL_H00000258349-1   0.000000000412   8-58   RING finger domain, C3HC4  
HGL_H00000258349-2   0.00000000212   8-55   RING finger domain, C3HC4  
HGL_H00000259050   0.000000000000033   539-603   Variant RING domain  
HGL_H00000259605   5.55e-20   356-422   RING finger domain, C3HC4  
HGL_H00000259939   0.00000000000235   177-216   RING finger domain, C3HC4  
  0.0000000247   91-157   IBR domain  
  0.0000000812   27-98   RING finger domain, C3HC4  
HGL_H00000260947   2.43e-34   2-69   RING finger domain, C3HC4  
HGL_H00000261245   0.0000000000167   2-62   RING finger domain, C3HC4  
HGL_H00000261537   2.71e-21   63-137   ZZ domain  
  0.0000000412   880-940   RING finger domain, C3HC4  
  0.00207   751-795   RING finger domain, C3HC4  
  0.0162   798-843   RING finger domain, C3HC4  
HGL_H00000261593   5.5e-16   11-74   RING finger domain, C3HC4  
HGL_H00000261658-1   0.00000000000000214   29-95   RING finger domain, C3HC4  
HGL_H00000262367   0.00000000000247   1611-1658   ZZ domain  
HGL_H00000262370   0.000000000000707   277-327   RING finger domain, C3HC4  
HGL_H00000262482   2.72e-20   211-275   RING finger domain, C3HC4  
HGL_H00000262563   1.22e-18   4-75   RING finger domain, C3HC4  
HGL_H00000262843   0.00000000000000148   20-107   RING finger domain, C3HC4  
  0.00406   131-181   ZZ domain  
HGL_H00000263253   0.00000000000306   1664-1710   ZZ domain  
HGL_H00000263925   0.0000000000000195   27-100   RING finger domain, C3HC4  
HGL_H00000263966   7.53e-33   123-230   Zf-UBP  
HGL_H00000264033   7.51e-43   292-370   RING finger domain, C3HC4  
HGL_H00000264122   1.04e-42   349-426   RING finger domain, C3HC4  
HGL_H00000264198   0.00000163   301-346   RING finger domain, C3HC4  
HGL_H00000264555   0.000000000000942   33-84   RING finger domain, C3HC4  
HGL_H00000264926   0.0000000000000053   2-74   RING finger domain, C3HC4  
HGL_H00000265742   1.77e-20   330-417   RING finger domain, C3HC4  
  6.36e-16   512-561   RING finger domain, C3HC4  
  0.00000125   404-486   RING finger domain, C3HC4  
HGL_H00000265981-1   1.83e-16   149-195   RING finger domain, C3HC4  
HGL_H00000265981-2   0.0000000000000019   51-99   RING finger domain, C3HC4  
HGL_H00000266643-2   0.00000000000000194   38-93   Variant RING domain  
HGL_H00000266880   0.000000000000106   287-358   RING finger domain, C3HC4  
HGL_H00000268058   0.000000589   52-94   RING finger domain, C3HC4  
HGL_H00000269190   1.12e-20   400-478   ZZ domain  
HGL_H00000269391   0.00000000000185   276-326   RING finger domain, C3HC4  
HGL_H00000269439   1.5e-20   227-275   RING finger domain, C3HC4  
HGL_H00000270279   4.57e-37   285-362   RING finger domain, C3HC4  
  0.000247   392-416   RING finger domain, C3HC4  
HGL_H00000273067   0.000000000000053   160-215   Variant RING domain  
HGL_H00000274056   0.0000000000000441   292-345   Variant RING domain  
HGL_H00000274068   0.000000000000197   310-382   RING finger domain, C3HC4  
HGL_H00000274140   0.0000000000000622   2-54   Variant RING domain  
HGL_H00000274542   6.65e-19   526-589   RING finger domain, C3HC4  
HGL_H00000274773-1   0.000000000000265   19-58   RING finger domain, C3HC4  
HGL_H00000274811   3.12e-20   365-431   RING finger domain, C3HC4  
HGL_H00000276893   0.000000000000126   723-786   RING finger domain, C3HC4  
HGL_H00000282003   0.0000000000162   17-64   RING finger domain, C3HC4  
HGL_H00000282369-1   0.0000000126   20-56   RING finger domain, C3HC4  
HGL_H00000284551-1   4.78e-23   18-91   RING finger domain, C3HC4  
HGL_H00000284551-2   1.58e-21   9-81   RING finger domain, C3HC4  
HGL_H00000286349   0.000000103   129-191   RING finger domain, C3HC4  
HGL_H00000287546   0.0000141   1251-1290   RING finger domain, C3HC4  
HGL_H00000288774   0.00000000000000287   259-304   RING finger domain, C3HC4  
HGL_H00000290649   2.04e-21   268-335   RING finger domain, C3HC4  
HGL_H00000294258   0.0000271   34-110   RING finger domain, C3HC4  
HGL_H00000295704   0.0000000106   134-208   RING finger domain, C3HC4  
HGL_H00000296098   0.000000000000619   18-111   RING finger domain, C3HC4  
HGL_H00000296161   1.66e-17   548-617   RING finger domain, C3HC4  
HGL_H00000298854   0.00000000927   350-406   RING finger domain, C3HC4  
HGL_H00000299440   1.56e-26   270-353   RING finger domain, C3HC4  
HGL_H00000299604   0.000000000542   56-115   RING finger domain, C3HC4  
HGL_H00000300417   0.000000742   673-715   RING finger domain, C3HC4  
HGL_H00000300650   0.0000000125   658-702   RING finger domain, C3HC4  
HGL_H00000300793   0.000000000184   795-835   RING finger domain, C3HC4  
HGL_H00000301924   6.19e-21   14-86   RING finger domain, C3HC4  
HGL_H00000302120   1.13e-18   7-79   RING finger domain, C3HC4  
HGL_H00000302830   0.000000489   342-401   U-box  
HGL_H00000304321   1.74e-20   242-302   RING finger domain, C3HC4  
HGL_H00000304670   6.41e-19   222-285   RING finger domain, C3HC4  
HGL_H00000305161   0.00000000000033   16-67   RING finger domain, C3HC4  
HGL_H00000307265   6.18e-24   341-414   Variant RING domain  
HGL_H00000308022   0.000000177   8-52   ZZ domain  
HGL_H00000308944   0.0000000000000862   723-774   RING finger domain, C3HC4  
HGL_H00000309141   0.0000000000000033   26-80   Variant RING domain  
HGL_H00000309457   0.00000706   800-868   RING finger domain, C3HC4  
HGL_H00000311827   0.00000424   36-87   RING finger domain, C3HC4  
HGL_H00000312439-1   0.0000000103   340-395   RING finger domain, C3HC4  
HGL_H00000312981   4.94e-22   104-198   Zf-UBP  
HGL_H00000313691-3   1.29e-20   3276-3364   ZZ domain  
HGL_H00000313881   0.0000000000139   320-386   RING finger domain, C3HC4  
HGL_H00000315112   0.00000000000000583   778-845   IBR domain  
  0.0000000436   695-756   RING finger domain, C3HC4  
  0.000000153   858-931   RING finger domain, C3HC4  
HGL_H00000315212   4.99e-18   206-258   RING finger domain, C3HC4  
HGL_H00000316628   0.000000000000754   7-71   RING finger domain, C3HC4  
HGL_H00000316840   1.2e-18   66-138   RING finger domain, C3HC4  
HGL_H00000317872-2   9.72e-21   226-313   RING finger domain, C3HC4  
HGL_H00000318944   0.00000000000732   128-188   RING finger domain, C3HC4  
HGL_H00000319986   1.01e-16   2-59   ZZ domain  
HGL_H00000320508   5.66e-18   34-92   RING finger domain, C3HC4  
HGL_H00000320623   0.0000000795   333-387   RING finger domain, C3HC4  
HGL_H00000320869   0.000000000000118   7-52   RING finger domain, C3HC4  
  0.0000509   182-214   IBR domain  
HGL_H00000320898   0.0000000000000265   12-62   RING finger domain, C3HC4  
HGL_H00000321239   0.0000000000381   134-182   RING finger domain, C3HC4  
HGL_H00000321330   2.65e-16   16-100   RING finger domain, C3HC4  
  0.000000000000671   181-219   RING finger domain, C3HC4  
  0.000000006   92-158   IBR domain  
HGL_H00000322457   0.0000018   15-80   RING finger domain, C3HC4  
HGL_H00000322885   1.83e-18   389-490   RING finger domain, C3HC4  
HGL_H00000323889   3.98e-18   7-80   RING finger domain, C3HC4  
HGL_H00000323913   0.000000000000581   17-111   RING finger domain, C3HC4  
HGL_H00000324956-1   1.01e-20   215-301   RING finger domain, C3HC4  
  0.0000000000003   390-448   RING finger domain, C3HC4  
  0.00000000000212   290-356   RING finger domain, C3HC4  
HGL_H00000324956-2   0.0000000000208   206-268   RING finger domain, C3HC4  
  0.000000000141   363-410   RING finger domain, C3HC4  
  0.0000953   260-323   RING finger domain, C3HC4  
HGL_H00000325677   0.000000000042   929-990   RING finger domain, C3HC4  
HGL_H00000325929   0.000000000000104   43-96   RING finger domain, C3HC4  
HGL_H00000326095   0.0000471   104-152   RING finger domain, C3HC4  
HGL_H00000326170   0.000000389   308-352   RING finger domain, C3HC4  
HGL_H00000327994   1.86e-19   7-79   RING finger domain, C3HC4  
HGL_H00000328203   0.0000000000000751   6-56   RING finger domain, C3HC4  
HGL_H00000329918-1   0.00000000471   415-461   RING finger domain, C3HC4  
HGL_H00000329918-2   0.00000000104   448-497   RING finger domain, C3HC4  
HGL_H00000330813   1.77e-26   280-381   Zf-UBP  
  0.0000000000732   263-308   RING finger domain, C3HC4  
HGL_H00000332284   4.42e-17   2-74   RING finger domain, C3HC4  
HGL_H00000333181   0.000000000000024   9-64   Variant RING domain  
HGL_H00000333376   3.41e-19   36-146   Zf-UBP  
HGL_H00000334657   0.0000000000542   58-101   RING finger domain, C3HC4  
HGL_H00000334808   6.71e-19   23-137   Zf-UBP  
HGL_H00000337500   0.000000000000707   10-79   RING finger domain, C3HC4  
HGL_H00000338711   8.48e-21   4-84   RING finger domain, C3HC4  
HGL_H00000339659   0.00000000000000442   18-92   RING finger domain, C3HC4  
HGL_H00000340797   0.00000000000000353   16-90   RING finger domain, C3HC4  
HGL_H00000341361   1.9e-20   222-289   RING finger domain, C3HC4  
HGL_H00000341380   8.7e-18   267-344   RING finger domain, C3HC4  
HGL_H00000342121   1.48e-18   602-668   RING finger domain, C3HC4  
HGL_H00000342970   0.000000000435   97-137,221-256   RING finger domain, C3HC4  
HGL_H00000343001   1.59e-19   1234-1300   U-box  
HGL_H00000343765-1   6.13e-18   5-76   RING finger domain, C3HC4  
HGL_H00000343765-2   7.28e-20   5-80   RING finger domain, C3HC4  
HGL_H00000343765-3   4.01e-19   62-141   RING finger domain, C3HC4  
HGL_H00000346490   0.00000000000000159   2249-2302   RING finger domain, C3HC4  
  0.0000000000194   2090-2175   RING finger domain, C3HC4  
  0.0297   2162-2230   IBR domain  
HGL_H00000346791   0.000000000000148   1814-1856   RING finger domain, C3HC4  
HGL_H00000346850   0.000000124   323-370   RING finger domain, C3HC4  
HGL_H00000348081   7.65e-21   183-263   ZZ domain  
HGL_H00000348299   7.29e-18   2-83   RING finger domain, C3HC4  
HGL_H00000348632   0.0000000000742   408-457   RING finger domain, C3HC4  
  0.000000000155   561-613   RING finger domain, C3HC4  
  0.000000000186   244-287   RING finger domain, C3HC4  
  0.00000000102   315-393   IBR domain  
  0.00000000459   468-546   IBR domain  
HGL_H00000349156-2   0.00000261   65-127   RING finger domain, C3HC4  
HGL_H00000349298   0.00000365   353-402   RING finger domain, C3HC4  
HGL_H00000349596-1   1.56e-19   6-85   RING finger domain, C3HC4  
HGL_H00000349596-2   5.08e-17   9-83   RING finger domain, C3HC4  
HGL_H00000349783   0.000000000401   8-58   RING finger domain, C3HC4  
HGL_H00000350009   3.53e-24   7-91   Zf-UBP  
HGL_H00000352028   0.0000000000000471   8-69   RING finger domain, C3HC4  
HGL_H00000352685   0.00000000127   27-74   RING finger domain, C3HC4  
HGL_H00000352734   0.0000000000000706   110-168   RING finger domain, C3HC4  
  0.00000000406   44-108   IBR domain  
HGL_H00000353735-2   0.00000000000000353   94-148   RING finger domain, C3HC4  
HGL_H00000354033   0.00000000000172   140-188   RING finger domain, C3HC4  
HGL_H00000354361   0.0000000000000603   363-417   RING finger domain, C3HC4  
HGL_H00000354571   0.0000000000000106   197-267   RING finger domain, C3HC4  
HGL_H00000354775   2.83e-18   622-674   RING finger domain, C3HC4  
HGL_H00000354923   1.29e-20   3276-3364   ZZ domain  
HGL_H00000355014   7.07e-18   582-645   RING finger domain, C3HC4  
HGL_H00000355568   1.62e-24   255-330   Variant RING domain  
HGL_H00000356473   0.00000245   1305-1357   RING finger domain, C3HC4  
HGL_H00000356480-2   1.44e-17   33-105   RING finger domain, C3HC4  
HGL_H00000356480-3   6.83e-18   35-108   RING finger domain, C3HC4  
HGL_H00000356515   5.89e-21   2985-3073   ZZ domain  
HGL_H00000356641   3.09e-16   118-173   RING finger domain, C3HC4  
HGL_H00000358297-1   1.13e-23   210-275   RING finger domain, C3HC4  
HGL_H00000358297-2   1.66e-17   210-276   RING finger domain, C3HC4  
HGL_H00000358297-3   3.53e-23   39-106   RING finger domain, C3HC4  
HGL_H00000358374   0.00000000000283   15-68   RING finger domain, C3HC4  
HGL_H00000358795   0.0000000245   481-530   RING finger domain, C3HC4  
HGL_H00000358815   0.00000003   452-503   RING finger domain, C3HC4  
HGL_H00000360497   0.0000000000114   264-308   RING finger domain, C3HC4  
HGL_H00000360690   2.7e-17   301-370   RING finger domain, C3HC4  
HGL_H00000361506   1.88e-23   8-91   Zf-UBP  
HGL_H00000362100   7.53e-28   2-95   Zf-UBP  
HGL_H00000362555   0.00000000000101   97-151   RING finger domain, C3HC4  
  0.00000000000812   3-71   IBR domain  
HGL_H00000363390   0.000000000000379   14-109   RING finger domain, C3HC4  
HGL_H00000364263   0.00000000000276   33-103   RING finger domain, C3HC4  
HGL_H00000365851   0.000000000000795   14-69   RING finger domain, C3HC4  
HGL_H00000367173   0.000002   20-71   RING finger domain, C3HC4  
HGL_H00000368856   0.0000000185   338-404   RING finger domain, C3HC4  
HGL_H00000369217   7.06e-21   211-269   RING finger domain, C3HC4  
  8.33e-17   57-140   RING finger domain, C3HC4  
  0.00000000159   132-199   IBR domain  
HGL_H00000369373   1.1e-25   3-83   RING finger domain, C3HC4  
HGL_H00000369452   1.44e-29   4-88   RING finger domain, C3HC4  
HGL_H00000369681   0.0000002   91-163   Zf-UBP  
HGL_H00000369921   5.12e-18   743-801   RING finger domain, C3HC4  
  0.0000000318   664-731   IBR domain  
  0.00006   616-672   RING finger domain, C3HC4  
HGL_H00000370157   0.00000000000000111   2-88   RING finger domain, C3HC4  
  0.000989   109-161   ZZ domain  
HGL_H00000370949   0.0000177   132-209   RING finger domain, C3HC4  
HGL_H00000371051   0.000000000188   1730-1789   ZZ domain  
  0.000000000659   1687-1738   ZZ domain  
HGL_H00000371352   0.0000486   29-88   RING finger domain, C3HC4  
HGL_H00000371800   7.07e-20   220-274   RING finger domain, C3HC4  
HGL_H00000373718   0.00000000942   1241-1288   RING finger domain, C3HC4  
HGL_H00000373752   0.00000000000012   432-481   RING finger domain, C3HC4  
HGL_H00000373772   0.0000000000994   905-965   RING finger domain, C3HC4  
HGL_H00000373846   0.00000000739   1508-1559   RING finger domain, C3HC4  
HGL_H00000374455   4.36e-17   30-89   ZZ domain  
HGL_H00000374552   0.000000000118   726-780   RING finger domain, C3HC4  
  0.00000000188   656-717   IBR domain  
  0.00000689   573-652   RING finger domain, C3HC4  
HGL_H00000375726   0.000000000883   31-82   U-box  
  0.0000159   227-280   U-box  
HGL_H00000376332   0.00000000000000574   380-438   RING finger domain, C3HC4  
HGL_H00000376500   0.00000000625   42-98   RING finger domain, C3HC4  
HGL_H00000376545   4.52e-25   390-474   U-box  
HGL_H00000376572   0.00000000000707   129-186   RING finger domain, C3HC4  
HGL_H00000376785-1   0.000000000000278   7-75   RING finger domain, C3HC4  
HGL_H00000376806   1.85e-27   2-95   Zf-UBP  
HGL_H00000377044-1   1.85e-20   174-236   RING finger domain, C3HC4  
HGL_H00000377044-2   5.71e-17   59-124   RING finger domain, C3HC4  
HGL_H00000377915-1   0.00000104   10-58   ZZ domain  
HGL_H00000378006   0.0000000000000236   14-76   RING finger domain, C3HC4  
HGL_H00000379308   5.89e-16   128-208   RING finger domain, C3HC4  
  0.000000000000578   295-350   RING finger domain, C3HC4  
  0.00000000000155   199-268   IBR domain  
HGL_H00000381295   0.000000000000404   700-758   RING finger domain, C3HC4  
HGL_H00000381298   2.29e-16   236-298   RING finger domain, C3HC4  
HGL_H00000382423   0.0000000906   271-334   RING finger domain, C3HC4  
HGL_H00000382794   0.0000326   2-46   RING finger domain, C3HC4  
HGL_H00000384084   9.3e-18   219-294   ZZ domain  
HGL_H00000384553   7.34e-21   221-271   RING finger domain, C3HC4  
HGL_H00000385021   0.00000000153   257-333   RING finger domain, C3HC4  
HGL_H00000385038   4.12e-17   586-672   ZZ domain  
HGL_H00000385285   0.0000000000000283   145-199   RING finger domain, C3HC4  
  0.00000000606   316-377   RING finger domain, C3HC4  
HGL_H00000385328   7.34e-17   308-355   RING finger domain, C3HC4  
HGL_H00000385610   0.00000000101   364-412   RING finger domain, C3HC4  
HGL_H00000388550   2.5e-18   71-119   RING finger domain, C3HC4  
HGL_H00000388652-2   0.000000000000424   20-89   Zf-UBP  
HGL_H00000389891   0.0000000000236   38-111   RING finger domain, C3HC4  
HGL_H00000390427   0.00000000000141   38-105   U-box  
HGL_H00000393478   0.0000432   1149-1204   RING finger domain, C3HC4  
HGL_H00000393641   6.63e-18   944-992   RING finger domain, C3HC4  
HGL_H00000396489   0.00000000000003   61-114   Variant RING domain  
HGL_H00000397334   0.000000000033   221-278   RING finger domain, C3HC4  
HGL_H00000398566   9.3e-22   1384-1478   Zf-UBP  
HGL_H00000400984   0.000000000942   243-290   RING finger domain, C3HC4  
HGL_H00000401277   0.0000305   223-271   RING finger domain, C3HC4  
HGL_H00000403222   2.42e-18   288-344   RING finger domain, C3HC4  
  0.0000000000000122   135-221   RING finger domain, C3HC4  
  0.00000000148   207-276   IBR domain  
HGL_H00000403293   0.0000171   522-576   RING finger domain, C3HC4  
HGL_H00000404169   0.00000000259   505-558   RING finger domain, C3HC4  
HGL_H00000407656   1.79e-16   24-80   RING finger domain, C3HC4  
HGL_H00000409919   3.98e-21   3-90   RING finger domain, C3HC4  
  0.00000000027   129-188   RING finger domain, C3HC4  
HGL_H00000411250   0.000000000000129   216-270   ZZ domain  
HGL_H00000411848   0.000000000000002   291-347   Variant RING domain  
HGL_H00000412962   2.87e-20   271-335   RING finger domain, C3HC4  
HGL_H00000414698   7.07e-17   102-160   RING finger domain, C3HC4  
HGL_H00000415246   1.83e-21   72-123   RING finger domain, C3HC4  
HGL_H00000415682-1   0.0000000113   55-110   RING finger domain, C3HC4  
HGL_H00000415682-2   0.000000000000377   195-244   RING finger domain, C3HC4  
HGL_H00000416177   0.000000000000283   274-337   Variant RING domain  
HGL_H00000417943   0.00000000000186   11-66   RING finger domain, C3HC4  
HGL_H00000419981   6.56e-17   1142-1195   RING finger domain, C3HC4  
HGL_H00000420465   0.000000000181   13-71   RING finger domain, C3HC4  
HGL_H00000420489   0.000000000000135   14-64   RING finger domain, C3HC4  
HGL_H00000420777   2.43e-18   3-90   RING finger domain, C3HC4  
HGL_N10000348   0.0000115   61-90   RING finger domain, C3HC4  
HGL_N10007305   0.00000000000289   22-77   RING finger domain, C3HC4  
  0.00000000424   107-161   RING finger domain, C3HC4  
HGL_N10010322   1.16e-32   413-495   RING finger domain, C3HC4  
HGL_N10013049   0.00000053   97-139   ZZ domain  
  0.00000053   286-328   ZZ domain  
HGL_N10013050   0.0000000106   91-135   ZZ domain  
  0.0000000177   304-338   ZZ domain  
HGL_N10015214   0.00000000000000589   10-68   RING finger domain, C3HC4  
HGL_N10016126   0.000000000518   55-112   ZZ domain  
HGL_N10017867   0.0000235   91-117   RING finger domain, C3HC4  
HGL_N10020835   0.00000000471   14-96   RING finger domain, C3HC4  
HGL_R00000047653   0.000000000000316   7-63   RING finger domain, C3HC4  
 
Weak hits:
HGL_H00000229758   0.0118   363-417   RING finger domain, C3HC4  
HGL_H00000238892   0.00765   53-93   RING finger domain, C3HC4  
HGL_H00000253110   0.0777   71-133   RING finger domain, C3HC4  
HGL_H00000262971   0.0224   463-518   RING finger domain, C3HC4  
HGL_H00000267460   0.00706   455-497   RING finger domain, C3HC4  
HGL_H00000268676-2   0.0371   282-315   RING finger domain, C3HC4  
HGL_H00000282369-2   0.0494   255-305   ZZ domain  
HGL_H00000283632   0.00883   284-323   RING finger domain, C3HC4  
HGL_H00000290650   0.00259   1070-1128   RING finger domain, C3HC4  
HGL_H00000299413   0.0353   13-61   Zf-UBP  
HGL_H00000322532   0.0547   352-395   RING finger domain, C3HC4  
HGL_H00000326563   0.00215   963-993   ZZ domain  
HGL_H00000334474   0.000918   717-787   RING finger domain, C3HC4  
HGL_H00000349156-1   0.000254   35-96   RING finger domain, C3HC4  
HGL_H00000351789-2   0.0146   298-340   RING finger domain, C3HC4  
HGL_H00000356150-1   0.00609   439-484   RING finger domain, C3HC4  
HGL_H00000370826   0.0424   589-621   ZZ domain  
HGL_H00000373522   0.0777   61-105   RING finger domain, C3HC4  
HGL_H00000381229-2   0.00777   24-57   RING finger domain, C3HC4  
HGL_H00000381648-2   0.0812   332-387   RING finger domain, C3HC4  
HGL_H00000382204   0.000459   1839-1904   ZZ domain  
HGL_H00000386516   0.00424   658-691   RING finger domain, C3HC4  
HGL_H00000387426-1   0.000177   79-139   RING finger domain, C3HC4  
HGL_H00000389709   0.000671   3-53   RING finger domain, C3HC4  
HGL_H00000399257   0.00177   142-197   RING finger domain, C3HC4  
HGL_H00000414723   0.00198   482-548   RING finger domain, C3HC4  
HGL_M00000109299   0.0138   14-42   RING finger domain, C3HC4  
HGL_N10007251   0.0362   224-265   RING finger domain, C3HC4  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

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