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LDL receptor-like module superfamily domain assignments
in
Macaca mulatta 69_1

Assignment details

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Macaca mulatta 69_1 has 192 significant domains in 45 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000000207   0.000000196   483-514   LDL receptor-like module  
  0.000000314   519-558   LDL receptor-like module  
  0.0000262   448-481   LDL receptor-like module  
ENSMMUP00000001593   0.000000694   3-42   LDL receptor-like module  
ENSMMUP00000002111   0.000000000445   303-341   LDL receptor-like module  
  0.00000000055   348-391   LDL receptor-like module  
  0.0000000017   263-300   LDL receptor-like module  
  0.0000000524   175-215   LDL receptor-like module  
ENSMMUP00000003116   0.0000406   68-108   LDL receptor-like module  
  0.000196   31-66   LDL receptor-like module  
ENSMMUP00000004819   0.0000000000314   142-184   LDL receptor-like module  
  0.0000000000772   104-144   LDL receptor-like module  
  0.0000000000982   26-70   LDL receptor-like module  
  0.000000000196   196-232   LDL receptor-like module  
  0.000000000196   230-271   LDL receptor-like module  
  0.000000000367   62-104   LDL receptor-like module  
  0.0000000707   274-311   LDL receptor-like module  
ENSMMUP00000005382   0.0000000694   14-48   LDL receptor-like module  
ENSMMUP00000006182   0.000000209   48-85   LDL receptor-like module  
ENSMMUP00000006268   0.00000000838   296-332   LDL receptor-like module  
ENSMMUP00000006690   0.0000000353   225-264   LDL receptor-like module  
  0.0000746   456-494   LDL receptor-like module  
  0.089   31-51   LDL receptor-like module  
ENSMMUP00000007245   0.000000017   258-294   LDL receptor-like module  
  0.000000982   419-453   LDL receptor-like module  
ENSMMUP00000009296   0.0000000000223   17-53   LDL receptor-like module  
  0.000000000419   58-95   LDL receptor-like module  
  0.000000000497   98-135   LDL receptor-like module  
ENSMMUP00000009996   0.000000000236   162-198   LDL receptor-like module  
  0.00000000038   290-330   LDL receptor-like module  
  0.000000000772   42-78   LDL receptor-like module  
  0.000000000812   256-292   LDL receptor-like module  
  0.00000000262   82-125   LDL receptor-like module  
  0.0000000038   116-161   LDL receptor-like module  
  0.0000000196   202-242   LDL receptor-like module  
ENSMMUP00000010013   0.000000223   6-41   LDL receptor-like module  
ENSMMUP00000012039   0.000000000144   195-231   LDL receptor-like module  
  0.000000000929   157-193   LDL receptor-like module  
  0.0000000011   116-156   LDL receptor-like module  
ENSMMUP00000012866   0.00000000563   284-321   LDL receptor-like module  
ENSMMUP00000012945   0.000000000126   877-922   LDL receptor-like module  
  0.000000000236   3759-3799   LDL receptor-like module  
  0.000000000249   3633-3669   LDL receptor-like module  
  0.000000000275   921-959   LDL receptor-like module  
  0.000000000419   842-881   LDL receptor-like module  
  0.000000000589   3594-3631   LDL receptor-like module  
  0.000000000589   3554-3589   LDL receptor-like module  
  0.000000000615   2761-2797   LDL receptor-like module  
  0.000000000668   3675-3720   LDL receptor-like module  
  0.000000000681   3472-3512   LDL receptor-like module  
  0.000000000785   3354-3398   LDL receptor-like module  
  0.000000000929   2892-2933   LDL receptor-like module  
  0.00000000144   1006-1044   LDL receptor-like module  
  0.00000000223   1054-1090   LDL receptor-like module  
  0.00000000262   2682-2718   LDL receptor-like module  
  0.00000000353   2547-2588   LDL receptor-like module  
  0.00000000432   2803-2839   LDL receptor-like module  
  0.00000000537   3511-3551   LDL receptor-like module  
  0.0000000055   3317-3352   LDL receptor-like module  
  0.00000000838   2588-2627   LDL receptor-like module  
  0.00000000903   3437-3473   LDL receptor-like module  
  0.0000000157   3396-3433   LDL receptor-like module  
  0.0000000183   2721-2763   LDL receptor-like module  
  0.000000126   31-69   LDL receptor-like module  
  0.00000017   2512-2549   LDL receptor-like module  
  0.000000196   2841-2881   LDL receptor-like module  
  0.000000209   2641-2677   LDL receptor-like module  
  0.000000419   965-1005   LDL receptor-like module  
  0.000000681   1136-1172   LDL receptor-like module  
  0.000000903   76-109   LDL receptor-like module  
  0.000000982   1100-1133   LDL receptor-like module  
  0.00000759   3721-3753   LDL receptor-like module  
ENSMMUP00000013440   0.0000196   437-470   LDL receptor-like module  
ENSMMUP00000015801   0.00000000877   321-359   LDL receptor-like module  
ENSMMUP00000017205   0.0000000000511   308-348   LDL receptor-like module  
  0.000000000196   272-310   LDL receptor-like module  
  0.00000000038   187-227   LDL receptor-like module  
  0.000000000471   353-389   LDL receptor-like module  
  0.000000000537   112-150   LDL receptor-like module  
  0.0000000055   149-186   LDL receptor-like module  
  0.00000000641   231-269   LDL receptor-like module  
  0.00000157   70-112   LDL receptor-like module  
ENSMMUP00000019467   0.000000249   172-203   LDL receptor-like module  
ENSMMUP00000019791   0.00000000000288   31-68   LDL receptor-like module  
  0.0000000000126   148-188   LDL receptor-like module  
  0.000000000157   270-306   LDL receptor-like module  
  0.00000000038   70-108   LDL receptor-like module  
  0.0000000011   187-225   LDL receptor-like module  
  0.00000000236   107-149   LDL receptor-like module  
  0.00000000628   234-268   LDL receptor-like module  
  0.0000000393   312-349   LDL receptor-like module  
ENSMMUP00000020105   0.000000117   111-149   LDL receptor-like module  
ENSMMUP00000021143   0.000000000017   210-247   LDL receptor-like module  
  0.0000000262   287-326   LDL receptor-like module  
  0.0000157   246-282   LDL receptor-like module  
ENSMMUP00000021179   0.0000000000209   399-437   LDL receptor-like module  
  0.000000000157   140-177   LDL receptor-like module  
  0.000183   329-354   LDL receptor-like module  
  0.00131   357-398   LDL receptor-like module  
ENSMMUP00000021946   0.0000000000209   52-89   LDL receptor-like module  
  0.0000000000615   124-166   LDL receptor-like module  
ENSMMUP00000023696   0.000000000089   499-536   LDL receptor-like module  
  0.000000000785   427-462   LDL receptor-like module  
  0.00000000183   462-499   LDL receptor-like module  
  0.000000715   538-578   LDL receptor-like module  
ENSMMUP00000023709   0.00000000458   334-372   LDL receptor-like module  
ENSMMUP00000023760   0.0000000144   155-193   LDL receptor-like module  
ENSMMUP00000026132   0.000000275   102-134   LDL receptor-like module  
ENSMMUP00000026182   0.0000000000458   3-42   LDL receptor-like module  
ENSMMUP00000027116   0.0000000327   291-327   LDL receptor-like module  
ENSMMUP00000027117   0.0000000327   291-327   LDL receptor-like module  
ENSMMUP00000027679   0.0000000157   141-173   LDL receptor-like module  
ENSMMUP00000027948   0.00000000916   254-289   LDL receptor-like module  
  0.0000000157   219-252   LDL receptor-like module  
ENSMMUP00000028679   0.00000000209   633-677   LDL receptor-like module  
  0.00000000262   557-595   LDL receptor-like module  
  0.00000000432   321-359   LDL receptor-like module  
  0.00000000458   285-321   LDL receptor-like module  
  0.00000000524   248-285   LDL receptor-like module  
  0.000000034   358-393   LDL receptor-like module  
  0.00000105   599-631   LDL receptor-like module  
ENSMMUP00000028682   0.0000000000511   848-890   LDL receptor-like module  
  0.000000000157   929-968   LDL receptor-like module  
  0.000000000262   24-63   LDL receptor-like module  
  0.000000000367   1013-1050   LDL receptor-like module  
  0.00000000038   2691-2728   LDL receptor-like module  
  0.000000000393   889-931   LDL receptor-like module  
  0.000000000524   974-1011   LDL receptor-like module  
  0.00000000131   1057-1097   LDL receptor-like module  
  0.00000000196   2558-2598   LDL receptor-like module  
  0.00000000314   2731-2765   LDL receptor-like module  
  0.00000000511   2813-2849   LDL receptor-like module  
  0.00000000785   2598-2637   LDL receptor-like module  
  0.0000000131   2851-2890   LDL receptor-like module  
  0.0000000157   2771-2805   LDL receptor-like module  
  0.0000000183   2903-2938   LDL receptor-like module  
  0.0000000419   3494-3530   LDL receptor-like module  
  0.0000000524   2522-2559   LDL receptor-like module  
  0.00000017   71-106   LDL receptor-like module  
  0.000000275   1105-1140   LDL receptor-like module  
  0.00000038   1143-1178   LDL receptor-like module  
  0.00000118   2657-2687   LDL receptor-like module  
  0.00223   3345-3371   LDL receptor-like module  
ENSMMUP00000028788   0.0000000000772   643-680   LDL receptor-like module  
  0.00000017   183-222   LDL receptor-like module  
ENSMMUP00000030121   0.0000000000524   454-491   LDL receptor-like module  
  0.000000000196   164-201   LDL receptor-like module  
  0.0000000011   210-249   LDL receptor-like module  
  0.00000236   415-452   LDL receptor-like module  
  0.00258   367-413   LDL receptor-like module  
ENSMMUP00000030277   0.000000114   123-156   LDL receptor-like module  
ENSMMUP00000031947   0.0000576   228-254   LDL receptor-like module  
ENSMMUP00000032009   0.000000000017   450-488   LDL receptor-like module  
  0.00000000209   164-200   LDL receptor-like module  
  0.00000013   411-449   LDL receptor-like module  
  0.000000157   211-254   LDL receptor-like module  
  0.000000733   374-411   LDL receptor-like module  
ENSMMUP00000036188   0.00000034   174-206   LDL receptor-like module  
ENSMMUP00000038205   0.0000000000106   1039-1077   LDL receptor-like module  
  0.0000000000128   2690-2731   LDL receptor-like module  
  0.0000000000772   3582-3621   LDL receptor-like module  
  0.000000000103   2812-2851   LDL receptor-like module  
  0.000000000117   2942-2983   LDL receptor-like module  
  0.000000000144   1239-1280   LDL receptor-like module  
  0.00000000017   1121-1158   LDL receptor-like module  
  0.000000000209   2981-3021   LDL receptor-like module  
  0.000000000314   3465-3501   LDL receptor-like module  
  0.000000000406   3673-3710   LDL receptor-like module  
  0.000000000419   3748-3788   LDL receptor-like module  
  0.000000000445   3024-3064   LDL receptor-like module  
  0.00000000055   2654-2697   LDL receptor-like module  
  0.000000000969   997-1034   LDL receptor-like module  
  0.00000000103   76-117   LDL receptor-like module  
  0.00000000109   3713-3750   LDL receptor-like module  
  0.00000000122   2858-2894   LDL receptor-like module  
  0.00000000157   2-37   LDL receptor-like module  
  0.00000000157   3796-3833   LDL receptor-like module  
  0.00000000183   1080-1117   LDL receptor-like module  
  0.00000000249   190-230   LDL receptor-like module  
  0.00000000497   3540-3584   LDL receptor-like module  
  0.00000000576   1160-1197   LDL receptor-like module  
  0.00000000733   156-193   LDL receptor-like module  
  0.00000000864   1203-1239   LDL receptor-like module  
  0.00000000982   39-75   LDL receptor-like module  
  0.000000017   3881-3917   LDL receptor-like module  
  0.0000000223   3502-3543   LDL receptor-like module  
  0.0000000236   2775-2814   LDL receptor-like module  
  0.0000000262   238-274   LDL receptor-like module  
  0.0000000694   3837-3875   LDL receptor-like module  
  0.0000000694   1284-1320   LDL receptor-like module  
  0.000000288   2898-2941   LDL receptor-like module  
  0.000000314   3636-3669   LDL receptor-like module  
  0.00000484   121-154   LDL receptor-like module  
  0.0000055   2738-2772   LDL receptor-like module  
ENSMMUP00000040132   0.000000707   73-106   LDL receptor-like module  
  0.000131   121-150   LDL receptor-like module  
  0.000864   156-197   LDL receptor-like module  
ENSMMUP00000040191   0.00000000125   1306-1344   LDL receptor-like module  
  0.00000000127   1227-1267   LDL receptor-like module  
  0.0000000038   1268-1304   LDL receptor-like module  
 
Weak hits:
ENSMMUP00000010010   0.000109   193-217   LDL receptor-like module  
ENSMMUP00000018615   0.000115   78-119   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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