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DNA-binding domain superfamily domain assignments
in
Malus domestica v196

Assignment details

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Malus domestica v196 has 353 significant domains in 306 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000119204|PACid:22652602   0.0000000000000373   108-153   GCC-box binding domain  
MDP0000119956|PACid:22665905   9.81e-17   112-161   GCC-box binding domain  
MDP0000120147|PACid:22660620   1.9e-19   37-95   GCC-box binding domain  
MDP0000121984|PACid:22671696   7.19e-18   229-290   GCC-box binding domain  
  0.00000000000000719   130-195   GCC-box binding domain  
MDP0000122665|PACid:22631397   1.5e-22   89-148   GCC-box binding domain  
MDP0000122728|PACid:22652791   0.0000000000000556   93-153   GCC-box binding domain  
  0.000000000000647   187-248   GCC-box binding domain  
MDP0000122739|PACid:22674923   3.07e-20   14-71   GCC-box binding domain  
MDP0000122740|PACid:22629075   3.07e-20   14-71   GCC-box binding domain  
MDP0000123172|PACid:22656894   3.53e-21   50-108   GCC-box binding domain  
MDP0000124316|PACid:22645901   1.11e-20   6-65   GCC-box binding domain  
MDP0000125317|PACid:22628226   1.96e-17   444-504   GCC-box binding domain  
  0.0000000000000118   345-411   GCC-box binding domain  
MDP0000125673|PACid:22682472   1.5e-20   22-79   GCC-box binding domain  
MDP0000127054|PACid:22624694   3.79e-21   7-66   GCC-box binding domain  
MDP0000127123|PACid:22640961   6.41e-20   24-81   GCC-box binding domain  
MDP0000127134|PACid:22655578   7.19e-22   113-173   GCC-box binding domain  
MDP0000128326|PACid:22662837   6.54e-18   43-100   GCC-box binding domain  
MDP0000128793|PACid:22658186   0.00000386   2-30   GCC-box binding domain  
MDP0000128924|PACid:22664801   1.83e-17   76-133   GCC-box binding domain  
MDP0000128979|PACid:22675489   1.24e-22   88-145   GCC-box binding domain  
MDP0000129902|PACid:22678434   0.0000049   2-30   GCC-box binding domain  
MDP0000129941|PACid:22671921   0.000000131   140-184   GCC-box binding domain  
MDP0000130802|PACid:22675475   0.000000000209   155-223   GCC-box binding domain  
MDP0000133423|PACid:22640762   1.05e-17   146-207   GCC-box binding domain  
  0.00000000000000235   47-113   GCC-box binding domain  
MDP0000133476|PACid:22631887   7.85e-20   38-94   GCC-box binding domain  
MDP0000133485|PACid:22656651   2.68e-22   129-188   GCC-box binding domain  
MDP0000133854|PACid:22643182   2.81e-22   10-69   GCC-box binding domain  
MDP0000135205|PACid:22661012   1.5e-22   89-148   GCC-box binding domain  
MDP0000137561|PACid:22649125   8.5e-17   301-361   GCC-box binding domain  
  0.00000000000000124   181-239   GCC-box binding domain  
MDP0000138669|PACid:22641801   6.21e-20   38-94   GCC-box binding domain  
MDP0000139446|PACid:22662616   2.62e-19   46-104   GCC-box binding domain  
MDP0000141335|PACid:22676001   2.75e-21   47-105   GCC-box binding domain  
MDP0000142490|PACid:22667797   1.9e-16   384-445   GCC-box binding domain  
  0.000000000235   321-376   GCC-box binding domain  
MDP0000143745|PACid:22676660   1.24e-22   191-249   GCC-box binding domain  
MDP0000145547|PACid:22670788   0.0000000000298   44-99   Methyl-CpG-binding domain, MBD  
  0.00000167   123-148,181-209   Methyl-CpG-binding domain, MBD  
MDP0000147009|PACid:22663615   2.03e-19   80-138   GCC-box binding domain  
MDP0000148178|PACid:22643067   4.18e-21   66-123   GCC-box binding domain  
MDP0000151428|PACid:22673391   3.07e-20   14-71   GCC-box binding domain  
MDP0000152089|PACid:22663193   0.00000000477   13-58   GCC-box binding domain  
MDP0000152128|PACid:22663521   2.29e-23   7-102   Methyl-CpG-binding domain, MBD  
MDP0000153436|PACid:22675261   1.24e-20   91-149   GCC-box binding domain  
MDP0000153445|PACid:22627640   3.92e-22   129-188   GCC-box binding domain  
MDP0000153589|PACid:22644982   0.00000000000000203   31-88   GCC-box binding domain  
MDP0000153823|PACid:22631362   0.0000017   50-87   GCC-box binding domain  
MDP0000153866|PACid:22647579   1.24e-18   70-139   GCC-box binding domain  
MDP0000154764|PACid:22663663   2.03e-21   152-212   GCC-box binding domain  
MDP0000155057|PACid:22675480   2.94e-17   111-166   GCC-box binding domain  
MDP0000155543|PACid:22636005   5.3e-23   17-76   GCC-box binding domain  
MDP0000155743|PACid:22627192   3.66e-19   33-89   GCC-box binding domain  
MDP0000157628|PACid:22653963   2.29e-19   33-89   GCC-box binding domain  
MDP0000161249|PACid:22659909   1.83e-22   131-190   GCC-box binding domain  
MDP0000161347|PACid:22660083   0.000000000015   89-139   GCC-box binding domain  
  0.0000000981   31-68   GCC-box binding domain  
MDP0000163645|PACid:22648342   4.64e-16   136-195   GCC-box binding domain  
  6.54e-16   228-287   GCC-box binding domain  
MDP0000165802|PACid:22635978   0.0000000000000183   97-153   GCC-box binding domain  
MDP0000165880|PACid:22636097   1.96e-19   80-138   GCC-box binding domain  
MDP0000166059|PACid:22652300   9.15e-18   152-213   GCC-box binding domain  
  0.0000000000000144   53-119   GCC-box binding domain  
MDP0000166779|PACid:22621909   0.0000000000000111   207-252   GCC-box binding domain  
MDP0000167207|PACid:22622664   5.95e-22   89-149   GCC-box binding domain  
MDP0000169669|PACid:22642453   0.00000000595   69-150   GCC-box binding domain  
MDP0000172065|PACid:22678172   2.75e-20   6-64   GCC-box binding domain  
MDP0000172804|PACid:22631953   1.24e-19   29-87   GCC-box binding domain  
MDP0000174352|PACid:22634443   1.5e-21   69-127   GCC-box binding domain  
MDP0000175309|PACid:22620306   1.83e-17   392-452   GCC-box binding domain  
  0.000000000000131   293-359   GCC-box binding domain  
MDP0000175375|PACid:22652181   1.63e-22   135-193   GCC-box binding domain  
MDP0000177547|PACid:22671662   3.79e-19   43-100   GCC-box binding domain  
MDP0000178263|PACid:22657051   4.9e-20   6-65   GCC-box binding domain  
MDP0000178398|PACid:22673134   2.42e-21   95-153   GCC-box binding domain  
MDP0000179477|PACid:22674884   0.0000000000036   22-71   Methyl-CpG-binding domain, MBD  
MDP0000179962|PACid:22643903   7.85e-21   19-77   GCC-box binding domain  
MDP0000180950|PACid:22661285   3.92e-23   125-185   GCC-box binding domain  
MDP0000181606|PACid:22646799   1.63e-16   230-289   GCC-box binding domain  
  0.00000000000000294   138-196   GCC-box binding domain  
MDP0000182395|PACid:22632336   5.3e-18   266-327   GCC-box binding domain  
  0.00000000000000719   167-233   GCC-box binding domain  
MDP0000183326|PACid:22681461   1.44e-22   117-174   GCC-box binding domain  
MDP0000186131|PACid:22622761   2.68e-22   115-173   GCC-box binding domain  
MDP0000186332|PACid:22623066   0.000000719   713-758   GCC-box binding domain  
MDP0000186581|PACid:22670981   6.54e-18   174-235   GCC-box binding domain  
  8.5e-16   72-140   GCC-box binding domain  
MDP0000187369|PACid:22624758   8.5e-20   19-77   GCC-box binding domain  
MDP0000187657|PACid:22625109   0.00000000445   13-58   GCC-box binding domain  
MDP0000187703|PACid:22672765   1.83e-17   392-452   GCC-box binding domain  
  0.000000000000131   293-359   GCC-box binding domain  
MDP0000188698|PACid:22642528   7.19e-18   311-371   GCC-box binding domain  
  0.0000000000608   216-278   GCC-box binding domain  
MDP0000189033|PACid:22658956   2.55e-22   126-185   GCC-box binding domain  
MDP0000189347|PACid:22659453   2.48e-17   63-121   GCC-box binding domain  
MDP0000190237|PACid:22676842   1.24e-21   136-194   GCC-box binding domain  
MDP0000190504|PACid:22677278   2.29e-22   119-176   GCC-box binding domain  
MDP0000190889|PACid:22677858   1.83e-17   390-450   GCC-box binding domain  
  0.0000000000000915   291-357   GCC-box binding domain  
MDP0000191680|PACid:22679002   9.15e-20   26-84   GCC-box binding domain  
  0.000124   96-125   GCC-box binding domain  
MDP0000194114|PACid:22635030   8.83e-16   91-148   Methyl-CpG-binding domain, MBD  
MDP0000195376|PACid:22652689   2.29e-20   99-158   GCC-box binding domain  
MDP0000197375|PACid:22671590   2.29e-19   33-89   GCC-box binding domain  
MDP0000197940|PACid:22640491   0.00000196   2-31   GCC-box binding domain  
MDP0000198054|PACid:22656752   1.5e-21   161-221   GCC-box binding domain  
MDP0000200319|PACid:22628431   3.86e-16   228-287   GCC-box binding domain  
  7.19e-16   136-195   GCC-box binding domain  
MDP0000201555|PACid:22630402   2.16e-16   5-74   GCC-box binding domain  
  0.0000137   123-151   GCC-box binding domain  
MDP0000204900|PACid:22683096   1.11e-16   265-325   GCC-box binding domain  
MDP0000206674|PACid:22669997   7.85e-18   172-233   GCC-box binding domain  
  0.00000000000000131   70-139   GCC-box binding domain  
MDP0000206676|PACid:22670001   0.0000000000000235   68-137   GCC-box binding domain  
  0.000000000118   170-209   GCC-box binding domain  
MDP0000207722|PACid:22671640   0.0000000000438   127-184   GCC-box binding domain  
MDP0000211581|PACid:22645563   0.000000157   128-163   GCC-box binding domain  
MDP0000211931|PACid:22677794   9.15e-18   324-384   GCC-box binding domain  
  0.0000000000000111   225-291   GCC-box binding domain  
MDP0000212766|PACid:22678988   0.00000000536   13-47   GCC-box binding domain  
MDP0000216740|PACid:22669246   3.6e-22   118-224   Methyl-CpG-binding domain, MBD  
MDP0000218209|PACid:22671405   0.000000000235   95-145   GCC-box binding domain  
  0.00000366   40-68   GCC-box binding domain  
MDP0000218344|PACid:22624010   7.19e-23   208-266   GCC-box binding domain  
MDP0000220226|PACid:22674588   0.00000000000111   176-252   Methyl-CpG-binding domain, MBD  
  0.00000000000317   81-136   Methyl-CpG-binding domain, MBD  
  0.00000392   7-67   Methyl-CpG-binding domain, MBD  
MDP0000222823|PACid:22678462   0.0000000392   132-186   Methyl-CpG-binding domain, MBD  
MDP0000222923|PACid:22631118   5.89e-26   214-323   Methyl-CpG-binding domain, MBD  
MDP0000223137|PACid:22662915   0.000000000000719   31-84   GCC-box binding domain  
MDP0000223609|PACid:22632190   5.95e-20   46-104   GCC-box binding domain  
MDP0000225376|PACid:22634666   1.18e-20   64-121   GCC-box binding domain  
MDP0000226099|PACid:22667606   4.18e-22   190-248   GCC-box binding domain  
MDP0000226115|PACid:22643795   3.4e-22   191-251   GCC-box binding domain  
MDP0000228713|PACid:22633142   2.68e-18   268-324   GCC-box binding domain  
  2.55e-17   51-109   GCC-box binding domain  
MDP0000229036|PACid:22681218   4.12e-21   190-248   GCC-box binding domain  
MDP0000229285|PACid:22673821   3.33e-21   197-254   GCC-box binding domain  
MDP0000231748|PACid:22627039   7.85e-18   147-208   GCC-box binding domain  
  8.5e-16   48-114   GCC-box binding domain  
MDP0000235028|PACid:22642707   1.44e-22   210-268   GCC-box binding domain  
MDP0000235313|PACid:22651772   6.54e-22   89-149   GCC-box binding domain  
MDP0000236605|PACid:22635340   9.81e-22   47-104   GCC-box binding domain  
MDP0000238848|PACid:22670446   0.000000654   586-631   GCC-box binding domain  
MDP0000238851|PACid:22639727   0.000000981   585-630   GCC-box binding domain  
MDP0000240840|PACid:22621608   2.94e-23   191-250   GCC-box binding domain  
MDP0000241650|PACid:22674735   3.6e-21   292-349   GCC-box binding domain  
MDP0000242611|PACid:22631286   1.18e-21   65-123   GCC-box binding domain  
MDP0000242979|PACid:22643626   1.57e-22   229-287   GCC-box binding domain  
MDP0000243113|PACid:22668567   5.3e-23   30-89   GCC-box binding domain  
MDP0000243375|PACid:22645247   3.79e-21   7-66   GCC-box binding domain  
MDP0000246184|PACid:22620961   4.05e-21   247-304   GCC-box binding domain  
MDP0000246608|PACid:22673747   2.42e-19   516-572   GCC-box binding domain  
  9.15e-16   331-387   GCC-box binding domain  
MDP0000246808|PACid:22677687   3.6e-22   104-163   GCC-box binding domain  
MDP0000248422|PACid:22620844   3.92e-22   9-98   Methyl-CpG-binding domain, MBD  
MDP0000248573|PACid:22654186   0.0000000000654   158-213   Methyl-CpG-binding domain, MBD  
  0.0000199   107-134   Methyl-CpG-binding domain, MBD  
  0.0000268   6-39   Methyl-CpG-binding domain, MBD  
MDP0000250924|PACid:22662614   9.81e-21   119-177   GCC-box binding domain  
MDP0000250927|PACid:22662615   2.94e-20   41-99   GCC-box binding domain  
MDP0000254227|PACid:22677502   2.68e-22   991-1049   GCC-box binding domain  
MDP0000258562|PACid:22674950   4.38e-19   32-90   GCC-box binding domain  
MDP0000259085|PACid:22633134   2.29e-21   229-287   GCC-box binding domain  
MDP0000259142|PACid:22681116   0.0000000000128   430-476   Methyl-CpG-binding domain, MBD  
  0.0000000134   500-550   Methyl-CpG-binding domain, MBD  
MDP0000262710|PACid:22653357   1.63e-17   71-129   GCC-box binding domain  
MDP0000263008|PACid:22654318   4.9e-21   41-98   GCC-box binding domain  
MDP0000264124|PACid:22653202   2.16e-20   42-99   GCC-box binding domain  
MDP0000264187|PACid:22653334   2.09e-21   151-208   GCC-box binding domain  
MDP0000264809|PACid:22623143   0.000000000000418   9-60   GCC-box binding domain  
MDP0000267651|PACid:22629159   3.01e-22   127-185   GCC-box binding domain  
MDP0000273201|PACid:22657497   0.000000000000111   108-153   GCC-box binding domain  
MDP0000276536|PACid:22648967   4.12e-19   47-104   GCC-box binding domain  
MDP0000277643|PACid:22667111   9.81e-18   360-420   GCC-box binding domain  
  0.0000000000000242   243-308   GCC-box binding domain  
MDP0000279733|PACid:22640010   8.5e-21   7-66   GCC-box binding domain  
MDP0000279943|PACid:22656415   1.5e-20   141-197   GCC-box binding domain  
MDP0000281079|PACid:22627277   0.0000000000366   155-220   GCC-box binding domain  
MDP0000281784|PACid:22628908   2.09e-17   185-246   GCC-box binding domain  
  3.66e-16   83-151   GCC-box binding domain  
MDP0000283079|PACid:22647819   6.21e-22   421-478   GCC-box binding domain  
MDP0000283350|PACid:22632691   1.05e-22   16-75   GCC-box binding domain  
MDP0000284574|PACid:22683006   5.56e-22   94-153   GCC-box binding domain  
MDP0000285955|PACid:22622669   0.0000000000366   155-220   GCC-box binding domain  
MDP0000286322|PACid:22670983   3.33e-16   70-139   GCC-box binding domain  
  0.0000248   218-246   GCC-box binding domain  
MDP0000286915|PACid:22624757   4.71e-22   23-82   GCC-box binding domain  
MDP0000287350|PACid:22673084   9.15e-20   6-64   GCC-box binding domain  
MDP0000287973|PACid:22626753   1.63e-17   336-396   GCC-box binding domain  
  0.00000000000000981   237-303   GCC-box binding domain  
MDP0000288465|PACid:22675530   2.62e-22   87-145   GCC-box binding domain  
MDP0000289945|PACid:22631039   5.43e-21   225-283   GCC-box binding domain  
MDP0000290585|PACid:22632236   7.19e-20   207-264   GCC-box binding domain  
MDP0000290880|PACid:22632807   1.11e-20   6-65   GCC-box binding domain  
MDP0000291802|PACid:22682201   0.0000036   258-311   Methyl-CpG-binding domain, MBD  
MDP0000292965|PACid:22620962   2.62e-22   117-174   GCC-box binding domain  
MDP0000293397|PACid:22621930   0.00000105   305-356   Methyl-CpG-binding domain, MBD  
MDP0000293996|PACid:22654744   3.66e-16   3-54   GCC-box binding domain  
MDP0000295902|PACid:22658609   2.75e-21   47-105   GCC-box binding domain  
MDP0000296716|PACid:22644319   2.35e-16   231-290   GCC-box binding domain  
  0.00000353   157-197   GCC-box binding domain  
MDP0000297196|PACid:22660924   0.00000000000000654   252-312   GCC-box binding domain  
  0.000000000000386   159-219   GCC-box binding domain  
MDP0000297646|PACid:22646187   3.79e-21   7-66   GCC-box binding domain  
MDP0000297698|PACid:22630403   7.19e-18   144-205   GCC-box binding domain  
  9.15e-16   42-110   GCC-box binding domain  
MDP0000298677|PACid:22680029   0.0000000000000915   104-151   GCC-box binding domain  
MDP0000299277|PACid:22649522   1.24e-22   142-202   GCC-box binding domain  
MDP0000300382|PACid:22635729   0.000000105   108-152   GCC-box binding domain  
MDP0000301302|PACid:22669483   9.48e-18   121-198   Methyl-CpG-binding domain, MBD  
MDP0000301893|PACid:22638790   0.00000245   269-322   Methyl-CpG-binding domain, MBD  
MDP0000303333|PACid:22625958   2.68e-22   16-75   GCC-box binding domain  
MDP0000308379|PACid:22620138   2.88e-22   116-173   GCC-box binding domain  
MDP0000308922|PACid:22653029   4.25e-22   114-172   GCC-box binding domain  
MDP0000309801|PACid:22638709   2.94e-23   191-250   GCC-box binding domain  
MDP0000310904|PACid:22657059   9.81e-22   47-104   GCC-box binding domain  
MDP0000312701|PACid:22660538   8.5e-23   23-82   GCC-box binding domain  
MDP0000313476|PACid:22662032   2.55e-23   174-232   GCC-box binding domain  
MDP0000313984|PACid:22663092   0.00000248   38-102   GCC-box binding domain  
MDP0000314191|PACid:22632052   1.63e-19   29-87   GCC-box binding domain  
MDP0000314518|PACid:22664146   0.00000000000000915   69-134   GCC-box binding domain  
MDP0000315483|PACid:22634534   3.2e-21   112-205   Methyl-CpG-binding domain, MBD  
MDP0000315533|PACid:22650467   1.9e-20   97-156   GCC-box binding domain  
MDP0000316694|PACid:22645363   4.32e-22   176-234   GCC-box binding domain  
MDP0000316843|PACid:22621969   1.5e-19   24-81   GCC-box binding domain  
MDP0000317932|PACid:22640677   2.03e-22   135-193   GCC-box binding domain  
MDP0000317950|PACid:22625116   3.92e-22   129-188   GCC-box binding domain  
MDP0000318457|PACid:22642109   9.81e-18   146-207   GCC-box binding domain  
  0.00000000000000177   47-113   GCC-box binding domain  
MDP0000319194|PACid:22668637   0.000000000000654   218-263   GCC-box binding domain  
MDP0000319736|PACid:22629246   1.05e-18   38-96   GCC-box binding domain  
MDP0000320993|PACid:22671503   3.33e-16   70-139   GCC-box binding domain  
  0.0000248   218-246   GCC-box binding domain  
MDP0000321569|PACid:22635836   0.000000000000785   31-86   GCC-box binding domain  
MDP0000321974|PACid:22679855   0.000000000000948   176-252   Methyl-CpG-binding domain, MBD  
  0.00000000000278   81-136   Methyl-CpG-binding domain, MBD  
  0.0000036   7-67   Methyl-CpG-binding domain, MBD  
MDP0000322279|PACid:22660162   1.05e-22   108-167   GCC-box binding domain  
MDP0000324718|PACid:22652478   1.5e-22   42-100   GCC-box binding domain  
MDP0000375866|PACid:22652714   8.17e-22   28-123   Methyl-CpG-binding domain, MBD  
MDP0000384932|PACid:22634550   0.000000000262   30-67   GCC-box binding domain  
MDP0000390121|PACid:22667001   6.21e-22   138-196   GCC-box binding domain  
MDP0000400129|PACid:22676593   1.05e-17   91-148   GCC-box binding domain  
MDP0000401140|PACid:22678557   4.12e-23   184-242   GCC-box binding domain  
MDP0000403580|PACid:22669351   4.25e-22   113-171   GCC-box binding domain  
MDP0000403994|PACid:22634505   2.29e-22   82-188   Methyl-CpG-binding domain, MBD  
MDP0000410215|PACid:22623579   0.00000000177   18-63   GCC-box binding domain  
MDP0000413387|PACid:22674121   2.42e-22   90-147   GCC-box binding domain  
MDP0000425270|PACid:22627654   0.00000000000418   41-86   GCC-box binding domain  
MDP0000430682|PACid:22637455   1.9e-19   48-108   GCC-box binding domain  
MDP0000430870|PACid:22676205   2.29e-20   6-64   GCC-box binding domain  
MDP0000442215|PACid:22627022   0.00000000000000144   171-231   GCC-box binding domain  
MDP0000444494|PACid:22629790   0.000000248   10-53   GCC-box binding domain  
MDP0000445110|PACid:22634781   7.85e-16   19-79   GCC-box binding domain  
MDP0000446783|PACid:22627161   2.03e-19   80-138   GCC-box binding domain  
MDP0000447570|PACid:22651768   1.83e-22   106-165   GCC-box binding domain  
MDP0000451365|PACid:22679621   3.73e-17   46-103   GCC-box binding domain  
MDP0000453797|PACid:22656083   1.44e-23   149-207   GCC-box binding domain  
MDP0000457509|PACid:22645189   4.97e-22   47-104   GCC-box binding domain  
MDP0000462461|PACid:22680933   9.81e-18   17-93   Methyl-CpG-binding domain, MBD  
MDP0000464704|PACid:22661554   1.96e-21   150-207   GCC-box binding domain  
MDP0000466331|PACid:22649006   0.000000000262   30-67   GCC-box binding domain  
MDP0000467753|PACid:22670870   5.1e-20   55-112   GCC-box binding domain  
MDP0000478356|PACid:22655331   1.5e-17   78-139   GCC-box binding domain  
  0.000105   15-44   GCC-box binding domain  
MDP0000485280|PACid:22659457   0.000000000000131   47-104   GCC-box binding domain  
MDP0000485776|PACid:22675110   0.000085   10-46   GCC-box binding domain  
MDP0000513140|PACid:22669906   0.000000000157   95-146   GCC-box binding domain  
  0.00000425   40-68   GCC-box binding domain  
MDP0000517257|PACid:22669106   2.03e-22   193-253   GCC-box binding domain  
MDP0000517262|PACid:22669108   1.05e-22   131-190   GCC-box binding domain  
MDP0000525933|PACid:22651872   4.45e-20   29-87   GCC-box binding domain  
MDP0000526584|PACid:22649377   0.00000000000000719   83-139   GCC-box binding domain  
MDP0000528870|PACid:22677129   0.000000000981   30-68   GCC-box binding domain  
MDP0000534780|PACid:22663807   0.00000000000000641   42-98   GCC-box binding domain  
MDP0000537164|PACid:22620110   0.0000000000206   7-54   Methyl-CpG-binding domain, MBD  
  0.0000000000687   78-128   Methyl-CpG-binding domain, MBD  
MDP0000537425|PACid:22644086   0.0000000000000602   9-60   GCC-box binding domain  
MDP0000542633|PACid:22661427   2.75e-22   30-89   GCC-box binding domain  
MDP0000549056|PACid:22637942   0.00000000268   156-198   GCC-box binding domain  
MDP0000551969|PACid:22678053   4.12e-19   47-104   GCC-box binding domain  
MDP0000566690|PACid:22633157   9.81e-22   77-135   GCC-box binding domain  
MDP0000567264|PACid:22640346   0.00000000000000124   148-208   GCC-box binding domain  
MDP0000574053|PACid:22636218   1.47e-23   7-102   Methyl-CpG-binding domain, MBD  
MDP0000612884|PACid:22676708   0.000000000157   22-68   GCC-box binding domain  
MDP0000628484|PACid:22680048   9.15e-21   62-119   GCC-box binding domain  
MDP0000629527|PACid:22656164   2.75e-22   30-89   GCC-box binding domain  
MDP0000633218|PACid:22656645   4.12e-23   184-242   GCC-box binding domain  
MDP0000634630|PACid:22661250   0.00000000549   30-66   GCC-box binding domain  
MDP0000649022|PACid:22675300   5.56e-20   16-74   GCC-box binding domain  
MDP0000652413|PACid:22653421   4.51e-21   63-120   GCC-box binding domain  
MDP0000654314|PACid:22649072   2.16e-22   127-185   GCC-box binding domain  
MDP0000665685|PACid:22662270   3.01e-23   142-202   GCC-box binding domain  
MDP0000668122|PACid:22633135   9.15e-23   18-76   GCC-box binding domain  
MDP0000675982|PACid:22682233   0.000000105   108-152   GCC-box binding domain  
MDP0000679280|PACid:22639235   7.19e-22   77-135   GCC-box binding domain  
MDP0000683814|PACid:22651664   1.31e-23   135-193   GCC-box binding domain  
MDP0000689946|PACid:22629481   1.5e-23   75-135   GCC-box binding domain  
MDP0000692632|PACid:22668838   0.0000000000000602   9-60   GCC-box binding domain  
MDP0000703626|PACid:22664890   4.9e-21   29-87   GCC-box binding domain  
MDP0000704216|PACid:22645263   1.7e-20   35-93   GCC-box binding domain  
MDP0000709648|PACid:22621756   0.000016   317-364   Methyl-CpG-binding domain, MBD  
MDP0000743350|PACid:22643220   1.18e-16   112-161   GCC-box binding domain  
MDP0000744693|PACid:22632592   5.3e-23   30-89   GCC-box binding domain  
MDP0000755622|PACid:22679212   5.56e-23   191-250   GCC-box binding domain  
MDP0000756341|PACid:22638534   4.38e-21   32-90   GCC-box binding domain  
MDP0000759299|PACid:22672294   4.64e-17   122-170   GCC-box binding domain  
MDP0000764803|PACid:22672243   7.19e-23   201-259   GCC-box binding domain  
MDP0000778140|PACid:22669811   1.18e-20   55-112   GCC-box binding domain  
MDP0000783818|PACid:22648272   2.42e-21   123-180   GCC-box binding domain  
MDP0000787281|PACid:22646683   3.01e-23   142-202   GCC-box binding domain  
MDP0000789227|PACid:22621605   2.16e-23   16-76   GCC-box binding domain  
MDP0000790788|PACid:22660139   1.37e-21   68-126   GCC-box binding domain  
MDP0000791464|PACid:22676006   2.94e-23   191-250   GCC-box binding domain  
MDP0000801540|PACid:22650234   2.09e-16   429-490   GCC-box binding domain  
  0.0000000000000216   330-396   GCC-box binding domain  
MDP0000803527|PACid:22659655   0.00000000000000504   70-135   GCC-box binding domain  
MDP0000805422|PACid:22661281   1.9e-23   61-121   GCC-box binding domain  
MDP0000814798|PACid:22663094   0.000000000137   11-46   GCC-box binding domain  
MDP0000824178|PACid:22633487   8.5e-18   369-430   GCC-box binding domain  
  0.0000000000000255   270-336   GCC-box binding domain  
MDP0000825712|PACid:22644467   0.0000000000144   3-53   GCC-box binding domain  
MDP0000827400|PACid:22657400   4.51e-20   50-107   GCC-box binding domain  
MDP0000829925|PACid:22651968   2.81e-22   10-69   GCC-box binding domain  
MDP0000830129|PACid:22663180   2.62e-23   24-83   GCC-box binding domain  
MDP0000833641|PACid:22657282   7.19e-20   35-94   GCC-box binding domain  
MDP0000839828|PACid:22667480   5.17e-22   35-92   GCC-box binding domain  
MDP0000842644|PACid:22622581   9.81e-23   131-190   GCC-box binding domain  
MDP0000848905|PACid:22624104   4.64e-22   77-135   GCC-box binding domain  
MDP0000854039|PACid:22640387   2.94e-22   122-179   GCC-box binding domain  
MDP0000855671|PACid:22646692   3.33e-22   103-162   GCC-box binding domain  
MDP0000861708|PACid:22627501   1.7e-22   117-174   GCC-box binding domain  
MDP0000865032|PACid:22681061   1.18e-23   134-192   GCC-box binding domain  
MDP0000868587|PACid:22641949   8.5e-22   25-83   GCC-box binding domain  
MDP0000871080|PACid:22663027   1.96e-17   455-515   GCC-box binding domain  
  0.0000000000000124   356-422   GCC-box binding domain  
MDP0000871361|PACid:22664660   4.9e-21   29-87   GCC-box binding domain  
MDP0000871689|PACid:22649981   7.85e-23   107-167   GCC-box binding domain  
MDP0000873258|PACid:22623173   1.7e-20   6-64   GCC-box binding domain  
MDP0000875838|PACid:22620766   0.000019   18-45   GCC-box binding domain  
MDP0000876858|PACid:22649221   0.00000000000000471   20-66   GCC-box binding domain  
MDP0000880063|PACid:22660537   2.16e-23   16-76   GCC-box binding domain  
MDP0000880312|PACid:22626068   4.18e-18   71-138   GCC-box binding domain  
MDP0000890854|PACid:22621343   3.01e-21   108-164   GCC-box binding domain  
MDP0000894895|PACid:22632513   7.19e-21   74-132   GCC-box binding domain  
MDP0000907929|PACid:22681155   2.68e-22   129-188   GCC-box binding domain  
MDP0000923579|PACid:22659109   2.94e-23   191-250   GCC-box binding domain  
MDP0000923690|PACid:22641032   2.16e-19   36-94   GCC-box binding domain  
MDP0000930655|PACid:22669774   2.55e-23   24-83   GCC-box binding domain  
MDP0000932292|PACid:22649079   2.09e-16   18-78   GCC-box binding domain  
MDP0000939633|PACid:22667205   2.42e-17   76-133   GCC-box binding domain  
MDP0000945267|PACid:22621253   8.5e-16   30-86   GCC-box binding domain  
 
Weak hits:
MDP0000128380|PACid:22624870   0.00137   573-617   Methyl-CpG-binding domain, MBD  
MDP0000248470|PACid:22653226   0.00209   71-93   GCC-box binding domain  
MDP0000289969|PACid:22662508   0.0268   119-157   Methyl-CpG-binding domain, MBD  
MDP0000296893|PACid:22628772   0.0517   88-116   GCC-box binding domain  
MDP0000298166|PACid:22662758   0.000915   75-106   GCC-box binding domain  
MDP0000299112|PACid:22633271   0.0242   32-62   GCC-box binding domain  
MDP0000760545|PACid:22654194   0.036   32-56   GCC-box binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   129270 129270
No Yes Homo sapiens 76_38 Human 56 56
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 11 11
No Yes Gorilla gorilla 76_3.1 Western gorilla 17 17
No Yes Pongo abelii 76_2 Sumatran orangutan 12 12
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 10 10
No Yes Papio anubis 76 Olive baboon 13 13
No Yes Macaca mulatta 76_1 Rhesus monkey 24 24
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 28 28
No Yes Otolemur garnettii 76_3 Small-eared galago 11 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 8 8
No Yes Rattus norvegicus 76_5.0 Norway rat 12 12
No Yes Mus musculus 76_38 House mouse 27 27
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 7 7
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 11 11
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 10 10
No Yes Cavia porcellus 76_3 Domestic guinea pig 11 11
No Yes Oryctolagus cuniculus 76_2 Rabbit 10 10
No Yes Ochotona princeps 76 American pika 9 9
No Yes Tupaia belangeri 76 Northern tree shrew 9 9
No Yes Sus scrofa 76_10.2 Pig 13 13
No Yes Bos taurus 76_3.1 Cattle 12 12
No Yes Ovis aries 76_3.1 Sheep 13 13
No Yes Vicugna pacos 76_1 Alpaca 7 7
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 11 11
No Yes Mustela putorius furo 76_1.0 Domestic ferret 10 10
No Yes Ailuropoda melanoleuca 76_1 Giant panda 11 11
No Yes Canis familiaris 76_3.1 Dog 16 16
No Yes Felis catus 76_6.2 Domestic cat 10 10
No Yes Equus caballus 76_2 Horse 13 13
No Yes Myotis lucifugus 76_2.0 Little brown bat 9 9
No Yes Pteropus vampyrus 76_1 Large flying fox 10 10
No Yes Sorex araneus 76_1 European shrew 6 6
No Yes Erinaceus europaeus 76 Western European hedgehog 8 8
No Yes Procavia capensis 76_1 Cape rock hyrax 8 8
No Yes Loxodonta africana 76_3 African savanna elephant 14 14
No Yes Echinops telfairi 76 Small Madagascar hedgehog 8 8
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 16 16
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 6 6
No Yes Macropus eugenii 76_1.0 Tammar wallaby 10 10
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 15 15
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 13 13
No Yes Ornithorhynchus anatinus 76_5 Platypus 9 9
No Yes Saccoglossus kowalevskii v3.0   11 11
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 7 7
No Yes Gallus gallus 76_4 Chicken 6 6
No Yes Anas platyrhynchos 76_1.0 Mallard 6 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 5 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 4 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 5 5
No Yes Anolis carolinensis 76_2.0 Green anole 10 10
No Yes Xenopus laevis African clawed frog 28 28
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 17 17
No Yes Latimeria chalumnae 76_1 Coelacanth 14 14
No Yes Lepisosteus oculatus 76 Spotted gar 11 11
No Yes Gadus morhua 76_1 Atlantic cod 9 9
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 10 10
No Yes Takifugu rubripes 76_4 Torafugu 29 29
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 12 12
No Yes Oryzias latipes 76_1 Japanese medaka 11 11
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 10 10
No Yes Poecilia formosa 76 Amazon molly 11 11
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 18 18
No Yes Astyanax mexicanus 76 Mexican tetra 13 13
No Yes Danio rerio 76_9 Zebrafish 18 18
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 5 5
No Yes Adineta vaga   10 10
No Yes Octopus bimaculoides 280   6 6
No Yes Crassostrea gigas 22 Pacific oyster 4 4
No Yes Lottia gigantea Owl limpet 6 5
No Yes Helobdella robusta   4 4
No Yes Capitella sp. I   6 6
No Yes Danaus plexippus OGS1.0 Monarch butterfly 7 7
No Yes Heliconius melpomene Postman butterfly 5 5
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 4
No Yes Linepithema humile v1.1 Argentine ant 4 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 3 3
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   4 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 4
No Yes Lucilia cuprina Australian sheep blowfly 6 6
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   7 7
No Yes Drosophila suzukii   5 5
No Yes Drosophila yakuba 1.3   5 5
No Yes Drosophila simulans 1.3   5 5
No Yes Drosophila sechellia 1.3   6 6
No Yes Drosophila melanogaster 76_5 Fruit fly 16 16
No Yes Drosophila erecta 1.3   6 6
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   6 6
No Yes Drosophila mojavensis 1.3   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 5
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 5 5
No Yes Pediculus humanus corporis (Early assembly) Human body louse 7 5
No Yes Acyrthosiphon pisum Pea aphid 3 3
No Yes Rhodnius prolixus 22   5 5
No Yes Daphnia pulex Common water flea 8 8
No Yes Strigamia maritima 22   142 139
No Yes Sarcoptes scabiei   4 4
No Yes Tetranychus urticae Two-spotted spider mite 5 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 7
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 2 2
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   4 4
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 3
No Yes Hydra vulgaris   3 3
No Yes Amphimedon queenslandica   5 5
No Yes Trichoplax adhaerens   1 1
No Yes Catenaria anguillulae PL171 v1.0   2 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Selaginella moellendorffii   136 120
No Yes Pinus taeda Loblolly pine 315 266
No Yes Picea abies Norway spruce 173 162
No Yes Eucalyptus grandis v201 Rose gum 208 184
No Yes Theobroma cacao B97-61/B2 v1 Cacao 162 140
No Yes Gossypium raimondii v221   455 385
No Yes Citrus clementina v165   204 176
No Yes Citrus sinensis v154 Sweet orange 219 180
No Yes Thellungiella halophila v173   182 165
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 331 305
No Yes Capsella rubella v183   182 166
No Yes Arabidopsis lyrata Lyrate rockcress 177 161
No Yes Arabidopsis thaliana 10 Thale cress 217 192
No Yes Carica papaya Papaya 117 103
No Yes Medicago truncatula Barrel medic 326 287
No Yes Phaseolus vulgaris v186 French bean 241 205
No Yes Glycine max v109 Soybean 448 397
No Yes Cucumis sativus v122 Cucumber 202 176
No Yes Fragaria vesca Wild strawberry 152 131
No Yes Malus domestica v196 Apple 353 306
No Yes Prunus persica v139 Peach 158 141
No Yes Linum usitatissimum v200 Flax 295 260
No Yes Manihot esculenta v147 Cassava 238 213
No Yes Populus trichocarpa v156 Black cottonwood 269 239
No Yes Vitis vinifera Wine grape 135 113
No Yes Mimulus guttatus v140 Spotted monkey flower 181 154
No Yes Solanum lycopersicum v.2.3 Tomato 222 186
No Yes Solanum tuberosum Potato 313 273
No Yes Actinidia chinensis Hongyang   262 236
No Yes Aquilegia coerulea v195   146 124
No Yes Triticum urartu 22   98 77
No Yes Triticum aestivum 22 Bread wheat 295 255
No Yes Aegilops tauschii 22   140 114
No Yes Brachypodium distachyon Stiff brome 196 166
No Yes Oryza barthii 22 African wild rice 189 153
No Yes Oryza meridionalis 22   213 172
No Yes Oryza glumaepatula 22   246 200
No Yes Oryza glaberrima African rice 165 139
No Yes Oryza punctata 22   237 189
No Yes Oryza nivara 22   260 213
No Yes Oryza brachyantha 22 Malo sina 144 119
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 278 231
No Yes Oryza sativa v193 Rice 262 225
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 178 160
No Yes Panicum virgatum v202 Switchgrass 343 298
No Yes Setaria italica v164 Foxtail millet 230 202
No Yes Zea mays subsp. mays Maize 343 272
No Yes Zea mays v181 Maize 383 299
No Yes Sorghum bicolor Sorghum 201 173
No Yes Musa balbisiana Balbis banana 356 320
No Yes Musa acuminata 22 Wild Malaysian banana 336 285
No Yes Amborella trichopoda 22   97 81
No Yes Physcomitrella patens   176 165
No Yes Coccomyxa subellipsoidea sp. C-169 v2   46 21
No Yes Asterochloris sp. Cgr/DA1pho v1.0   17 13
No Yes Chlorella variabilis sp. NC64A   29 18
No Yes Chlorella vulgaris   36 21
No Yes Volvox carteri f. nagariensis   31 24
No Yes Volvox carteri v199   29 22
No Yes Chlamydomonas reinhardtii 4.0   24 18
No Yes Ostreococcus sp. RCC809   15 10
No Yes Ostreococcus lucimarinus CCE9901   15 11
No Yes Ostreococcus tauri   11 8
No Yes Bathycoccus prasinos   15 12
No Yes Micromonas sp. RCC299   22 14
No Yes Micromonas pusilla CCMP1545 v3.0   28 18
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Bigelowiella natans CCMP2755 22   21 14
No Yes Cyanophora paradoxa   19 18
No Yes Ectocarpus siliculosus   10 10
No Yes Aureococcus anophagefferens   23 21
No Yes Pythium iwayamai DAOM BR242034 22   3 2
No Yes Pythium arrhenomanes ATCC 12531 22   2 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 5 4
No Yes Phytophthora sojae 1.1   4 3
No Yes Phytophthora infestans T30-4   3 2
No Yes Phytophthora capsici   4 3
No Yes Hyaloperonospora arabidopsidis 22   2 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   4 4
No Yes Fragilariopsis cylindrus   12 10
No Yes Thalassiosira pseudonana CCMP1335   34 27
No Yes Symbiodinium minutum clade B1 v1.2   6 4
No Yes Guillardia theta CCMP2712 v1.0   13 9
No Yes Emiliania huxleyi CCMP1516   464 232
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Acidaminococcus fermentans DSM 20731   2 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Eubacterium siraeum   1 1
No Yes Faecalibacterium prausnitzii   2 2
No Yes Ruminococcus sp.   3 3
No Yes Ruminococcus albus 7   2 2
No Yes Oscillibacter valericigenes Sjm18-20   2 2
No Yes butyrate-producing bacterium SS3/4   5 5
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Eubacterium limosum KIST612   2 2
No Yes Clostridium difficile 630   2 2
No Yes Filifactor alocis ATCC 35896   2 2
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   4 4
No Yes [Ruminococcus] torques   8 8
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   3 3
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Streptococcus gallolyticus UCN34   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   3 3
No Yes Burkholderia glumae BGR1   2 2
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   3 3
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella bronchiseptica RB50   2 2
No Yes Sphingobium sp. SYK-6   2 2
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Magnetospirillum magneticum AMB-1   2 2
No Yes Methylobacterium extorquens AM1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   7 7
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Proteus mirabilis HI4320   2 2
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   2 2
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Sodalis glossinidius str. 'morsitans'   2 2
No Yes Pantoea sp. At-9b   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 25 25
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 6 6
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 154 133
No Yes Hordeum vulgare 22 Domesticated barley 199 175
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 227 190
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   2 2
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Enterococcus faecium Aus0085   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   2 2
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   2 2
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   2 2
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   2 2
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 3
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes FSL R2-561   2 2
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis Bpp5   3 3
No Yes Bordetella bronchiseptica 253   1 1
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Methylobacterium extorquens DM4   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Shigella sonnei 53G   2 2
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae KCTC 2242   2 2
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   4 4
No Yes Escherichia coli O111:H- str. 11128   4 4
No Yes Escherichia coli O127:H6 str. E2348/69   5 5
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   3 3
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   3 3
No Yes Pseudomonas aeruginosa LESB58   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 62 62
No Yes Homo sapiens (NCBI version) Human 28 28
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 10 10
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 14 14
No Yes Lotus japonicus (Early assembly)   179 165
No Yes Malus x domestica (Duplicate) Apple 353 306
No Yes Ricinus communis (Early assembly) Castor bean 141 127
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   414 346
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 221 186
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 222 186
No Yes Phoenix dactylifera (Early draft) Date palm 44 35
No Yes Homo sapiens 69_37 Human 11 11
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 11 11
No Yes Gorilla gorilla 69_3.1 Western gorilla 14 14
No Yes Pongo abelii 69_2 Sumatran orangutan 11 11
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 11 11
No Yes Macaca mulatta 69_1 Rhesus monkey 10 10
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 10 10
No Yes Otolemur garnettii 69_3 Small-eared galago 11 11
No Yes Microcebus murinus 69_1 Gray mouse lemur 8 8
No Yes Rattus norvegicus 69_3.4 Norway rat 10 10
No Yes Mus musculus 69_38 House mouse 10 10
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 7 7
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 11 11
No Yes Cavia porcellus 69_3 Domestic guinea pig 11 11
No Yes Oryctolagus cuniculus 69_2 Rabbit 11 11
No Yes Ochotona princeps 69 American pika 9 9
No Yes Tupaia belangeri 69 Northern tree shrew 9 9
No Yes Sus scrofa 69_10.2 Pig 10 10
No Yes Bos taurus 69_3.1 Cattle 9 9
No Yes Vicugna pacos 69_1 Alpaca 7 7
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 11 11
No Yes Mustela putorius furo 69_1.0 Domestic ferret 10 10
No Yes Ailuropoda melanoleuca 69_1 Giant panda 11 11
No Yes Canis familiaris 69_3.1 Dog 10 10
No Yes Felis catus 69 Domestic cat 8 8
No Yes Equus caballus 69_2 Horse 11 11
No Yes Myotis lucifugus 69_2.0 Little brown bat 9 9
No Yes Pteropus vampyrus 69_1 Large flying fox 10 10
No Yes Sorex araneus 69_1 European shrew 6 6
No Yes Erinaceus europaeus 69 Western European hedgehog 8 8
No Yes Procavia capensis 69_1 Cape rock hyrax 8 8
No Yes Loxodonta africana 69_3 African savanna elephant 11 11
No Yes Echinops telfairi 69 Small Madagascar hedgehog 8 8
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 6 6
No Yes Macropus eugenii 69_1.0 Tammar wallaby 10 10
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 10 10
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 12 12
No Yes Ornithorhynchus anatinus 69_5 Platypus 8 8
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 6 6
No Yes Gallus gallus 69_2 Chicken 4 4
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 5 5
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 5 5
No Yes Anolis carolinensis 69_2.0 Green anole 9 9
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 11 11
No Yes Latimeria chalumnae 69_1 Coelacanth 11 11
No Yes Gadus morhua 69_1 Atlantic cod 9 9
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 9 9
No Yes Takifugu rubripes 69_4 Torafugu 9 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 11 11
No Yes Oryzias latipes 69_1 Japanese medaka 9 9
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 10 10
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 10 10
No Yes Danio rerio 69_9 Zebrafish 12 12
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 6 6
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes Arabidopsis thaliana 10 Thale cress 174 158
No Yes 1_050719N (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   2 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   2 2
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   5 5
No Yes Combined (meta-genome)   9 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   9 9
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   7 7
No Yes Dump bottom (Dump bottom) (meta-genome)   8 8
No Yes Dump top (Dump top) (meta-genome)   4 4
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   13 13
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   4 4
No Yes Human Gut Community Subject 8 (meta-genome)   12 12
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   20 20
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   63130 59377
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   6 6
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2311 2071
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   36938 32516
No Yes Global Ocean Sampling Expedition (GOS)   210 157
No Yes NCBI plasmid sequences (Plasmids)   17 17
No Yes NCBI viral sequences (Viral)   166 165
No Yes PDB chains (SCOP 1.75) (PDB)   10 10
No Yes Protein Data Bank (all PDB sequenc)   71 71
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   84 84
No Yes TargetDB (Targets)   27 26
No Yes The Salmonella enterica Pan-genome (meta-genome)   15 15
No Yes UniProt viral sequences (Viral)   65 65

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