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LDL receptor-like module superfamily domain assignments
in
Mustela putorius furo 76_1.0

Assignment details

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Mustela putorius furo 76_1.0 has 233 significant domains in 47 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000000366   0.0000000000209   466-504   LDL receptor-like module  
  0.0000000969   542-580   LDL receptor-like module  
  0.00000798   502-538   LDL receptor-like module  
ENSMPUP00000000367   0.0000000000209   464-502   LDL receptor-like module  
  0.000000183   540-579   LDL receptor-like module  
  0.00000798   500-536   LDL receptor-like module  
ENSMPUP00000000737   0.0000000000209   1318-1359   LDL receptor-like module  
  0.000000000038   2785-2826   LDL receptor-like module  
  0.0000000000458   3766-3803   LDL receptor-like module  
  0.0000000000641   2907-2946   LDL receptor-like module  
  0.000000000072   1159-1196   LDL receptor-like module  
  0.0000000000903   1118-1155   LDL receptor-like module  
  0.000000000131   1200-1237   LDL receptor-like module  
  0.000000000144   3079-3119   LDL receptor-like module  
  0.000000000327   3635-3675   LDL receptor-like module  
  0.00000000038   81-117   LDL receptor-like module  
  0.000000000497   3676-3716   LDL receptor-like module  
  0.000000000524   157-198   LDL receptor-like module  
  0.000000000576   3845-3882   LDL receptor-like module  
  0.000000000641   237-272   LDL receptor-like module  
  0.000000000668   3556-3594   LDL receptor-like module  
  0.000000000772   3800-3841   LDL receptor-like module  
  0.000000000969   3888-3924   LDL receptor-like module  
  0.0000000011   271-311   LDL receptor-like module  
  0.00000000144   1279-1317   LDL receptor-like module  
  0.0000000017   1075-1113   LDL receptor-like module  
  0.00000000183   3974-4010   LDL receptor-like module  
  0.00000000196   3596-3637   LDL receptor-like module  
  0.00000000249   3036-3077   LDL receptor-like module  
  0.00000000249   3119-3159   LDL receptor-like module  
  0.00000000537   2954-2990   LDL receptor-like module  
  0.0000000055   2748-2786   LDL receptor-like module  
  0.00000000654   120-156   LDL receptor-like module  
  0.00000000864   1238-1276   LDL receptor-like module  
  0.000000055   2994-3037   LDL receptor-like module  
  0.000000144   3931-3968   LDL receptor-like module  
  0.000000183   2870-2909   LDL receptor-like module  
  0.000000301   1363-1399   LDL receptor-like module  
  0.000000419   3729-3762   LDL receptor-like module  
  0.00000144   201-235   LDL receptor-like module  
  0.00000497   2830-2867   LDL receptor-like module  
ENSMPUP00000001735   0.000000000055   848-890   LDL receptor-like module  
  0.00000000017   929-968   LDL receptor-like module  
  0.000000000183   3569-3609   LDL receptor-like module  
  0.000000000236   3653-3698   LDL receptor-like module  
  0.000000000275   24-63   LDL receptor-like module  
  0.000000000314   3487-3527   LDL receptor-like module  
  0.000000000367   3612-3647   LDL receptor-like module  
  0.00000000038   3369-3409   LDL receptor-like module  
  0.000000000393   1013-1050   LDL receptor-like module  
  0.000000000406   2693-2730   LDL receptor-like module  
  0.000000000419   889-931   LDL receptor-like module  
  0.000000000563   974-1011   LDL receptor-like module  
  0.000000000812   3531-3570   LDL receptor-like module  
  0.00000000157   2853-2892   LDL receptor-like module  
  0.00000000183   2560-2600   LDL receptor-like module  
  0.00000000196   2733-2767   LDL receptor-like module  
  0.00000000497   3451-3486   LDL receptor-like module  
  0.00000000537   2815-2851   LDL receptor-like module  
  0.00000000589   1057-1097   LDL receptor-like module  
  0.0000000107   3411-3449   LDL receptor-like module  
  0.0000000128   3331-3366   LDL receptor-like module  
  0.0000000183   2773-2807   LDL receptor-like module  
  0.0000000196   2600-2639   LDL receptor-like module  
  0.000000038   3740-3776   LDL receptor-like module  
  0.000000119   2524-2561   LDL receptor-like module  
  0.000000249   1143-1178   LDL receptor-like module  
  0.000000668   1106-1140   LDL receptor-like module  
  0.000000798   71-106   LDL receptor-like module  
  0.00000101   2658-2689   LDL receptor-like module  
  0.0000209   3695-3731   LDL receptor-like module  
ENSMPUP00000001971   0.00000000916   40-79   LDL receptor-like module  
ENSMPUP00000002889   0.0000000123   296-332   LDL receptor-like module  
ENSMPUP00000003769   0.0000000000301   25-67   LDL receptor-like module  
ENSMPUP00000004300   0.0000000759   14-48   LDL receptor-like module  
ENSMPUP00000004312   0.000000000641   1171-1207   LDL receptor-like module  
  0.00000000406   1133-1169   LDL receptor-like module  
  0.00000000511   1093-1131   LDL receptor-like module  
ENSMPUP00000004401   0.0000000471   54-92   LDL receptor-like module  
ENSMPUP00000004995   0.0000000000524   266-306   LDL receptor-like module  
  0.000000000144   230-268   LDL receptor-like module  
  0.000000000432   145-185   LDL receptor-like module  
  0.000000000471   68-107   LDL receptor-like module  
  0.000000000524   311-347   LDL receptor-like module  
  0.00000000445   106-144   LDL receptor-like module  
  0.00000000681   189-227   LDL receptor-like module  
  0.00000157   28-70   LDL receptor-like module  
ENSMPUP00000005008   0.0000103   67-107   LDL receptor-like module  
  0.000209   30-65   LDL receptor-like module  
ENSMPUP00000005014   0.00000000262   560-598   LDL receptor-like module  
  0.00000000327   285-323   LDL receptor-like module  
  0.00000000838   323-360   LDL receptor-like module  
  0.00000000956   634-673   LDL receptor-like module  
  0.0000000262   248-283   LDL receptor-like module  
  0.000000126   364-404   LDL receptor-like module  
  0.000000223   600-632   LDL receptor-like module  
ENSMPUP00000005117   0.00000000000301   125-164   LDL receptor-like module  
  0.0000000000249   40-79   LDL receptor-like module  
  0.0000000000327   163-203   LDL receptor-like module  
  0.000000000367   78-116   LDL receptor-like module  
  0.0000000196   2-40   LDL receptor-like module  
  0.0000000249   209-246   LDL receptor-like module  
ENSMPUP00000005653   0.0000000000144   142-183   LDL receptor-like module  
  0.000000000055   104-144   LDL receptor-like module  
  0.0000000000759   197-234   LDL receptor-like module  
  0.000000000157   26-70   LDL receptor-like module  
  0.000000000183   62-104   LDL receptor-like module  
  0.000000000327   232-273   LDL receptor-like module  
ENSMPUP00000005716   0.0000000000249   1413-1450   LDL receptor-like module  
  0.0000000000615   1192-1230   LDL receptor-like module  
  0.000000000131   1149-1190   LDL receptor-like module  
  0.000000000144   1320-1356   LDL receptor-like module  
  0.00000000196   1072-1110   LDL receptor-like module  
  0.00000000249   1367-1400   LDL receptor-like module  
  0.0000000157   1235-1268   LDL receptor-like module  
  0.0000000262   1466-1505   LDL receptor-like module  
  0.0000000511   1507-1546   LDL receptor-like module  
  0.000000314   1117-1150   LDL receptor-like module  
  0.00000314   1272-1307   LDL receptor-like module  
ENSMPUP00000006256   0.000000000157   212-253   LDL receptor-like module  
  0.000000000209   130-165   LDL receptor-like module  
  0.000000000484   49-91   LDL receptor-like module  
  0.000000000576   8-45   LDL receptor-like module  
  0.000000000798   179-214   LDL receptor-like module  
  0.00000000641   83-128   LDL receptor-like module  
  0.000000406   257-293   LDL receptor-like module  
ENSMPUP00000006576   0.000000288   74-112   LDL receptor-like module  
  0.0000537   125-154   LDL receptor-like module  
  0.0000654   158-201   LDL receptor-like module  
ENSMPUP00000006719   0.0000000000524   1554-1592   LDL receptor-like module  
  0.00000000367   1406-1443   LDL receptor-like module  
  0.00000000628   2429-2465   LDL receptor-like module  
  0.0000000367   1442-1478   LDL receptor-like module  
  0.0000000367   1366-1402   LDL receptor-like module  
  0.0000000484   1484-1521   LDL receptor-like module  
  0.000000157   2365-2404   LDL receptor-like module  
  0.000000183   2209-2247   LDL receptor-like module  
  0.000000838   1594-1629   LDL receptor-like module  
  0.0000157   1647-1674   LDL receptor-like module  
ENSMPUP00000006839   0.00000262   63-102   LDL receptor-like module  
ENSMPUP00000007143   0.0000000000275   398-435   LDL receptor-like module  
  0.000000000223   139-176   LDL receptor-like module  
  0.000144   329-353   LDL receptor-like module  
  0.000982   355-397   LDL receptor-like module  
ENSMPUP00000007218   0.000000874   92-133   LDL receptor-like module  
ENSMPUP00000007239   0.000000157   124-155   LDL receptor-like module  
ENSMPUP00000007266   0.0000000000262   44-80   LDL receptor-like module  
  0.0000000000301   122-158   LDL receptor-like module  
ENSMPUP00000007553   0.0000000000497   454-491   LDL receptor-like module  
  0.00000000017   164-201   LDL receptor-like module  
  0.0000000012   210-249   LDL receptor-like module  
  0.00000236   415-452   LDL receptor-like module  
  0.00209   365-413   LDL receptor-like module  
ENSMPUP00000008664   0.00000000114   492-529   LDL receptor-like module  
  0.00000000262   457-492   LDL receptor-like module  
  0.00000000511   528-565   LDL receptor-like module  
  0.000000547   568-608   LDL receptor-like module  
ENSMPUP00000008689   0.0000000103   318-355   LDL receptor-like module  
ENSMPUP00000009135   0.00000000602   93-131   LDL receptor-like module  
ENSMPUP00000010649   0.00000000000746   688-727   LDL receptor-like module  
  0.00000038   228-268   LDL receptor-like module  
ENSMPUP00000010909   0.0000968   25-62   LDL receptor-like module  
ENSMPUP00000011339   0.0000000000353   74-114   LDL receptor-like module  
  0.000000000183   277-318   LDL receptor-like module  
  0.000000000681   38-73   LDL receptor-like module  
  0.00000000196   322-358   LDL receptor-like module  
  0.00000000209   372-410   LDL receptor-like module  
  0.00000000812   415-454   LDL receptor-like module  
  0.0000000393   204-239   LDL receptor-like module  
  0.0000000406   246-278   LDL receptor-like module  
  0.0000000851   115-149   LDL receptor-like module  
  0.000000314   161-197   LDL receptor-like module  
  0.0000196   7-31   LDL receptor-like module  
ENSMPUP00000011630   0.0000000000196   53-89   LDL receptor-like module  
  0.000000000589   134-171   LDL receptor-like module  
  0.00000000105   94-131   LDL receptor-like module  
ENSMPUP00000011664   0.000000000694   1174-1212   LDL receptor-like module  
  0.00000000115   1095-1135   LDL receptor-like module  
  0.0000000034   1136-1172   LDL receptor-like module  
ENSMPUP00000011818   0.000000223   5-38   LDL receptor-like module  
ENSMPUP00000011830   0.00000000497   556-595   LDL receptor-like module  
  0.00000000864   1239-1277   LDL receptor-like module  
  0.00000000864   981-1017   LDL receptor-like module  
  0.0000000183   1198-1235   LDL receptor-like module  
  0.0000000681   340-381   LDL receptor-like module  
  0.000000183   775-813   LDL receptor-like module  
  0.0000117   122-156   LDL receptor-like module  
  0.0000209   1281-1318   LDL receptor-like module  
ENSMPUP00000012557   0.000000236   524-563   LDL receptor-like module  
  0.0000288   448-481   LDL receptor-like module  
ENSMPUP00000014350   0.0000000000301   2935-2975   LDL receptor-like module  
  0.0000000000812   55-100   LDL receptor-like module  
  0.000000000144   19-56   LDL receptor-like module  
  0.000000000196   98-138   LDL receptor-like module  
  0.000000000249   2808-2845   LDL receptor-like module  
  0.000000000406   2068-2109   LDL receptor-like module  
  0.000000000681   2648-2688   LDL receptor-like module  
  0.000000000681   143-181   LDL receptor-like module  
  0.00000000072   2530-2574   LDL receptor-like module  
  0.000000000812   1937-1973   LDL receptor-like module  
  0.000000000825   182-218   LDL receptor-like module  
  0.000000000982   1723-1764   LDL receptor-like module  
  0.00000000106   2730-2765   LDL receptor-like module  
  0.00000000107   2851-2895   LDL receptor-like module  
  0.00000000157   2770-2807   LDL receptor-like module  
  0.00000000183   230-266   LDL receptor-like module  
  0.00000000209   1980-2014   LDL receptor-like module  
  0.00000000511   2493-2528   LDL receptor-like module  
  0.00000000524   1858-1894   LDL receptor-like module  
  0.00000000615   2687-2727   LDL receptor-like module  
  0.00000000733   2613-2649   LDL receptor-like module  
  0.0000000119   1767-1804   LDL receptor-like module  
  0.0000000124   2572-2609   LDL receptor-like module  
  0.0000000183   1897-1939   LDL receptor-like module  
  0.000000131   1817-1853   LDL receptor-like module  
  0.000000144   1688-1725   LDL receptor-like module  
  0.000000157   2016-2057   LDL receptor-like module  
  0.000000668   312-348   LDL receptor-like module  
  0.000000812   276-309   LDL receptor-like module  
  0.00000602   2897-2929   LDL receptor-like module  
ENSMPUP00000014449   0.0000000123   155-189   LDL receptor-like module  
ENSMPUP00000014635   0.0000201   78-119   LDL receptor-like module  
ENSMPUP00000014684   0.00000101   103-134   LDL receptor-like module  
ENSMPUP00000014975   0.0000000000196   586-624   LDL receptor-like module  
  0.000000000393   300-336   LDL receptor-like module  
  0.000000157   348-390   LDL receptor-like module  
  0.000000157   547-585   LDL receptor-like module  
  0.000000877   510-547   LDL receptor-like module  
ENSMPUP00000015899   0.000000000419   279-316   LDL receptor-like module  
  0.00000000109   364-408   LDL receptor-like module  
  0.00000000249   321-357   LDL receptor-like module  
  0.0000000524   191-231   LDL receptor-like module  
ENSMPUP00000015944   0.0000000982   178-212   LDL receptor-like module  
ENSMPUP00000016516   0.0000000327   291-327   LDL receptor-like module  
ENSMPUP00000017870   0.0000425   455-487   LDL receptor-like module  
ENSMPUP00000017968   0.00000000458   301-338   LDL receptor-like module  
ENSMPUP00000017993   0.000000301   26-63   LDL receptor-like module  
 
Weak hits:
ENSMPUP00000004386   0.00038   172-195   LDL receptor-like module  

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View all assignments containing a LDL receptor-like module domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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