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PHL pollen allergen superfamily domain assignments
in
Setaria italica v164

Assignment details

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Setaria italica v164 has 84 significant domains in 84 proteins.

     

Sequence ID   Evalue   Region   Family  
Si002127m|PACid:19675272   1.83e-34   243-335   PHL pollen allergen  
Si002656m|PACid:19676615   2.75e-32   156-248   PHL pollen allergen  
Si002709m|PACid:19676149   1.83e-32   149-240   PHL pollen allergen  
Si004866m|PACid:19678784   2.09e-33   153-244   PHL pollen allergen  
Si007031m|PACid:19705834   0.0000000000000249   155-259   PHL pollen allergen  
Si007103m|PACid:19705464   5.1e-32   165-258   PHL pollen allergen  
Si007953m|PACid:19703716   1.18e-31   166-257   PHL pollen allergen  
Si008396m|PACid:19702794   6.28e-18   163-261   PHL pollen allergen  
Si010632m|PACid:19694796   1.31e-31   219-311   PHL pollen allergen  
Si010808m|PACid:19693996   2.22e-27   174-268   PHL pollen allergen  
Si010869m|PACid:19696452   5.1e-34   162-253   PHL pollen allergen  
Si011875m|PACid:19697012   1.7e-31   167-260   PHL pollen allergen  
Si011944m|PACid:19694138   1.57e-32   196-290   PHL pollen allergen  
Si012468m|PACid:19696847   6.41e-31   189-283   PHL pollen allergen  
Si014674m|PACid:19690871   0.00000000000000405   27-113   PHL pollen allergen  
Si014675m|PACid:19691559   0.0000000000000275   27-113   PHL pollen allergen  
Si014676m|PACid:19693390   0.00000000000000405   27-113   PHL pollen allergen  
Si014946m|PACid:19692151   8.24e-30   173-267   PHL pollen allergen  
Si015179m|PACid:19692526   2.88e-30   164-258   PHL pollen allergen  
Si015303m|PACid:19691198   0.0000000000000275   27-113   PHL pollen allergen  
Si015354m|PACid:19692413   0.00000000000000405   27-113   PHL pollen allergen  
Si015425m|PACid:19691930   2.22e-30   184-276   PHL pollen allergen  
Si015532m|PACid:19692268   0.000000000000017   27-113   PHL pollen allergen  
Si015700m|PACid:19691612   2.49e-33   172-265   PHL pollen allergen  
Si017930m|PACid:19690452   2.35e-32   198-293   PHL pollen allergen  
Si017969m|PACid:19689205   4.19e-32   192-287   PHL pollen allergen  
Si017985m|PACid:19689961   1.1e-34   192-284   PHL pollen allergen  
Si018077m|PACid:19688690   2.75e-28   172-266   PHL pollen allergen  
Si018084m|PACid:19686583   5.89e-34   171-264   PHL pollen allergen  
Si018089m|PACid:19687193   8.37e-34   171-264   PHL pollen allergen  
Si018104m|PACid:19686481   5.89e-32   165-259   PHL pollen allergen  
Si018142m|PACid:19688673   1.27e-34   157-250   PHL pollen allergen  
Si018334m|PACid:19688691   0.000000641   172-208   PHL pollen allergen  
Si019241m|PACid:19686148   3.53e-30   112-203   PHL pollen allergen  
Si019761m|PACid:19686466   6.28e-32   173-263   PHL pollen allergen  
Si019805m|PACid:19688113   7.06e-25   34-117   PHL pollen allergen  
Si023065m|PACid:19698053   8.76e-35   153-245   PHL pollen allergen  
Si024097m|PACid:19699730   2.09e-30   158-249   PHL pollen allergen  
Si026654m|PACid:19707436   1.14e-33   172-264   PHL pollen allergen  
Si030565m|PACid:19713488   6.41e-30   219-312   PHL pollen allergen  
Si030574m|PACid:19712962   2.88e-31   219-312   PHL pollen allergen  
Si030754m|PACid:19713922   1.7e-21   152-248   PHL pollen allergen  
Si030872m|PACid:19709298   8.5e-18   149-249   PHL pollen allergen  
Si031915m|PACid:19711460   0.00000000000000119   27-113   PHL pollen allergen  
Si032101m|PACid:19712590   9.68e-29   155-247   PHL pollen allergen  
Si036649m|PACid:19684103   3.01e-20   204-300   PHL pollen allergen  
Si036654m|PACid:19684296   1.44e-32   217-316   PHL pollen allergen  
Si036708m|PACid:19680290   2.22e-31   180-273   PHL pollen allergen  
Si036752m|PACid:19679488   2.75e-31   176-268   PHL pollen allergen  
Si036755m|PACid:19679487   2.75e-31   176-268   PHL pollen allergen  
Si036819m|PACid:19680291   2.09e-31   164-257   PHL pollen allergen  
Si036899m|PACid:19684152   2.22e-32   183-282   PHL pollen allergen  
Si036940m|PACid:19681737   1.27e-28   182-275   PHL pollen allergen  
Si036992m|PACid:19684104   2.09e-20   156-252   PHL pollen allergen  
Si036999m|PACid:19684926   3.79e-31   178-270   PHL pollen allergen  
Si037023m|PACid:19684069   1.7e-30   168-265   PHL pollen allergen  
Si037029m|PACid:19680206   7.46e-20   151-247   PHL pollen allergen  
Si037030m|PACid:19682635   1.7e-31   172-265   PHL pollen allergen  
Si037053m|PACid:19682976   1.57e-34   168-261   PHL pollen allergen  
Si037057m|PACid:19679843   9.81e-36   168-261   PHL pollen allergen  
Si037058m|PACid:19680444   4.58e-35   168-261   PHL pollen allergen  
Si037085m|PACid:19682349   1.44e-33   165-257   PHL pollen allergen  
Si037106m|PACid:19679182   9.16e-31   162-255   PHL pollen allergen  
Si037127m|PACid:19682380   9.42e-33   159-252   PHL pollen allergen  
Si037156m|PACid:19681246   1.83e-32   153-244   PHL pollen allergen  
Si037172m|PACid:19685415   2.35e-28   151-242   PHL pollen allergen  
Si037603m|PACid:19684105   9.81e-21   78-174   PHL pollen allergen  
Si038641m|PACid:19683537   8.76e-32   156-247   PHL pollen allergen  
Si038663m|PACid:19684354   5.49e-27   160-253   PHL pollen allergen  
Si038718m|PACid:19679423   1.11e-29   152-243   PHL pollen allergen  
Si039002m|PACid:19682111   5.1e-29   153-244   PHL pollen allergen  
Si039294m|PACid:19680938   4.84e-28   154-245   PHL pollen allergen  
Si039578m|PACid:19685584   1.44e-27   156-248   PHL pollen allergen  
Si039613m|PACid:19684878   9.16e-31   162-255   PHL pollen allergen  
Si039707m|PACid:19681805   8.24e-29   153-244   PHL pollen allergen  
Si039771m|PACid:19682560   8.63e-32   170-263   PHL pollen allergen  
Si039780m|PACid:19682614   3.14e-30   152-243   PHL pollen allergen  
Si039870m|PACid:19679872   6.02e-31   162-255   PHL pollen allergen  
Si039920m|PACid:19679223   1.7e-28   161-258   PHL pollen allergen  
Si039935m|PACid:19679252   4.05e-28   104-195   PHL pollen allergen  
Si039970m|PACid:19680927   5.89e-29   152-243   PHL pollen allergen  
Si040025m|PACid:19680910   8.76e-31   161-253   PHL pollen allergen  
Si040086m|PACid:19685275   2.88e-33   174-267   PHL pollen allergen  
Si040134m|PACid:19681934   2.75e-30   156-247   PHL pollen allergen  
 
Weak hits:
Si040246m|PACid:19684821   0.00353   172-212   PHL pollen allergen  

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Select to display   Genome       Domains   Proteins
No Yes ALL   18115 18115
No Yes Saccoglossus kowalevskii v3.0   5 3
No Yes Oikopleura dioica   1 1
No Yes Adineta vaga   1 1
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Lottia gigantea Owl limpet 2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   4 4
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   4 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   3 3
No Yes Schizophyllum commune   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   2 2
No Yes Allomyces macrogynus ATCC 38327   5 5
No Yes Dictyostelium discoideum   4 4
No Yes Dictyostelium purpureum   4 4
No Yes Entamoeba dispar 1.2   3 3
No Yes Entamoeba invadens 1.2   7 7
No Yes Entamoeba histolytica 1   3 3
No Yes Selaginella moellendorffii   36 36
No Yes Pinus taeda Loblolly pine 134 123
No Yes Picea abies Norway spruce 61 59
No Yes Eucalyptus grandis v201 Rose gum 47 46
No Yes Theobroma cacao B97-61/B2 v1 Cacao 28 28
No Yes Gossypium raimondii v221   73 73
No Yes Citrus clementina v165   35 35
No Yes Citrus sinensis v154 Sweet orange 33 33
No Yes Thellungiella halophila v173   36 36
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 56 55
No Yes Capsella rubella v183   38 38
No Yes Arabidopsis lyrata Lyrate rockcress 34 33
No Yes Arabidopsis thaliana 10 Thale cress 42 42
No Yes Carica papaya Papaya 26 26
No Yes Medicago truncatula Barrel medic 50 50
No Yes Phaseolus vulgaris v186 French bean 40 40
No Yes Glycine max v109 Soybean 88 88
No Yes Cucumis sativus v122 Cucumber 38 38
No Yes Fragaria vesca Wild strawberry 34 33
No Yes Malus domestica v196 Apple 60 60
No Yes Prunus persica v139 Peach 26 26
No Yes Linum usitatissimum v200 Flax 65 65
No Yes Manihot esculenta v147 Cassava 45 45
No Yes Populus trichocarpa v156 Black cottonwood 39 39
No Yes Vitis vinifera Wine grape 29 29
No Yes Mimulus guttatus v140 Spotted monkey flower 38 38
No Yes Solanum lycopersicum v.2.3 Tomato 40 40
No Yes Solanum tuberosum Potato 48 45
No Yes Actinidia chinensis Hongyang   20 20
No Yes Aquilegia coerulea v195   25 25
No Yes Triticum urartu 22   73 70
No Yes Triticum aestivum 22 Bread wheat 159 158
No Yes Aegilops tauschii 22   82 82
No Yes Brachypodium distachyon Stiff brome 66 65
No Yes Oryza barthii 22 African wild rice 72 63
No Yes Oryza meridionalis 22   59 53
No Yes Oryza glumaepatula 22   76 70
No Yes Oryza glaberrima African rice 45 43
No Yes Oryza punctata 22   64 60
No Yes Oryza nivara 22   70 62
No Yes Oryza brachyantha 22 Malo sina 52 52
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 78 76
No Yes Oryza sativa v193 Rice 78 76
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 41 41
No Yes Panicum virgatum v202 Switchgrass 135 135
No Yes Setaria italica v164 Foxtail millet 84 84
No Yes Zea mays subsp. mays Maize 122 122
No Yes Zea mays v181 Maize 126 126
No Yes Sorghum bicolor Sorghum 90 90
No Yes Musa balbisiana Balbis banana 49 49
No Yes Musa acuminata 22 Wild Malaysian banana 54 54
No Yes Amborella trichopoda 22   13 13
No Yes Physcomitrella patens   36 36
No Yes Coccomyxa subellipsoidea sp. C-169 v2   10 10
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   4 4
No Yes Chlorella vulgaris   8 8
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Albugo laibachii 22   2 2
No Yes Pythium ultimum v1.7-2   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Naegleria gruberi   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   2 2
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Roseiflexus sp. RS-1   1 1
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Clostridium clariflavum DSM 19732   2 2
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Sorangium cellulosum 'So ce 56'   2 2
No Yes Stigmatella aurantiaca DW4/3-1   2 2
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Aspergillus fumigatus A1163   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 26 26
No Yes Hordeum vulgare 22 Domesticated barley 72 72
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 80 78
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Frankia sp. EuI1c   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 4 4
No Yes Lotus japonicus (Early assembly)   27 27
No Yes Malus x domestica (Duplicate) Apple 60 60
No Yes Ricinus communis (Early assembly) Castor bean 25 25
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   72 67
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 40 40
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 40 40
No Yes Phoenix dactylifera (Early draft) Date palm 14 14
No Yes Arabidopsis thaliana 10 Thale cress 35 35
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   5244 5241
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   12 12
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   532 527
No Yes Uniprot 2018_03 genome   6818 6736
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   29 29
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   71 71
No Yes TargetDB (Targets)   3 3

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