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LDL receptor-like module superfamily domain assignments
in
Meleagris gallopavo 76_2

Assignment details

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Meleagris gallopavo 76_2 has 201 significant domains in 50 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMGAP00000000099   0.00000182   187-227   LDL receptor-like module  
ENSMGAP00000000369   0.000000013   453-493   LDL receptor-like module  
  0.000000432   232-270   LDL receptor-like module  
ENSMGAP00000000373   0.000000013   456-496   LDL receptor-like module  
  0.000000432   235-273   LDL receptor-like module  
ENSMGAP00000000537   0.00000000089   6-44   LDL receptor-like module  
ENSMGAP00000000611   0.000000000353   442-477   LDL receptor-like module  
  0.000000000681   475-513   LDL receptor-like module  
  0.00000000537   511-547   LDL receptor-like module  
  0.000000477   555-594   LDL receptor-like module  
ENSMGAP00000001590   0.000000000000262   1325-1365   LDL receptor-like module  
  0.0000000000524   1232-1270   LDL receptor-like module  
  0.0000000000681   1105-1144   LDL receptor-like module  
  0.000000000157   1279-1314   LDL receptor-like module  
  0.000000000393   1066-1104   LDL receptor-like module  
  0.00000000128   985-1023   LDL receptor-like module  
  0.0000000327   1381-1418   LDL receptor-like module  
  0.0000000393   1148-1181   LDL receptor-like module  
  0.000000262   1030-1063   LDL receptor-like module  
  0.000000524   1424-1459   LDL receptor-like module  
  0.00000563   1185-1221   LDL receptor-like module  
ENSMGAP00000001957   0.000000000406   248-282   LDL receptor-like module  
ENSMGAP00000003498   0.0000209   115-139   LDL receptor-like module  
ENSMGAP00000003666   0.00000038   53-91   LDL receptor-like module  
ENSMGAP00000005067   0.0000000288   296-332   LDL receptor-like module  
ENSMGAP00000005260   0.00000733   11-43   LDL receptor-like module  
ENSMGAP00000005302   0.00000535   34-75   LDL receptor-like module  
ENSMGAP00000005455   0.000000183   940-978   LDL receptor-like module  
ENSMGAP00000005804   0.00000000000668   163-201   LDL receptor-like module  
  0.0000000000157   443-481   LDL receptor-like module  
  0.0000000249   208-249   LDL receptor-like module  
  0.00000102   404-442   LDL receptor-like module  
  0.00000628   366-403   LDL receptor-like module  
ENSMGAP00000007271   0.0000000000017   3-42   LDL receptor-like module  
ENSMGAP00000007430   0.0000000000223   4-41   LDL receptor-like module  
  0.00000000209   48-87   LDL receptor-like module  
ENSMGAP00000007511   0.0000000000733   142-181   LDL receptor-like module  
  0.000000000314   94-134   LDL receptor-like module  
  0.0000746   184-221   LDL receptor-like module  
ENSMGAP00000007519   0.000000131   170-206   LDL receptor-like module  
ENSMGAP00000007745   0.00000000288   27-70   LDL receptor-like module  
ENSMGAP00000008485   0.0000000236   293-329   LDL receptor-like module  
ENSMGAP00000009559   0.000000000406   22-60   LDL receptor-like module  
  0.0000000288   61-99   LDL receptor-like module  
  0.0000000327   227-262   LDL receptor-like module  
  0.000000275   107-144   LDL receptor-like module  
  0.000000314   147-185   LDL receptor-like module  
  0.000000903   193-223   LDL receptor-like module  
  0.0000576   1-24   LDL receptor-like module  
ENSMGAP00000009617   0.000000000668   1315-1350   LDL receptor-like module  
  0.00000000126   1277-1313   LDL receptor-like module  
  0.00000000314   1236-1276   LDL receptor-like module  
ENSMGAP00000010401   0.000000249   132-174   LDL receptor-like module  
ENSMGAP00000010762   0.0000000000511   29-65   LDL receptor-like module  
  0.000000000262   110-147   LDL receptor-like module  
  0.00000000055   70-107   LDL receptor-like module  
ENSMGAP00000010982   0.00000000000419   2718-2760   LDL receptor-like module  
  0.0000000000209   8-49   LDL receptor-like module  
  0.0000000000223   1049-1086   LDL receptor-like module  
  0.0000000000393   89-130   LDL receptor-like module  
  0.000000000055   1249-1290   LDL receptor-like module  
  0.0000000000602   2887-2923   LDL receptor-like module  
  0.0000000000746   1090-1128   LDL receptor-like module  
  0.000000000101   2841-2880   LDL receptor-like module  
  0.000000000119   3610-3651   LDL receptor-like module  
  0.000000000157   2969-3012   LDL receptor-like module  
  0.000000000288   1006-1044   LDL receptor-like module  
  0.000000000497   3909-3946   LDL receptor-like module  
  0.000000000746   3010-3052   LDL receptor-like module  
  0.00000000106   204-243   LDL receptor-like module  
  0.00000000131   3781-3819   LDL receptor-like module  
  0.00000000144   3703-3738   LDL receptor-like module  
  0.00000000144   3494-3530   LDL receptor-like module  
  0.00000000196   2682-2720   LDL receptor-like module  
  0.00000000209   169-205   LDL receptor-like module  
  0.00000000236   1131-1168   LDL receptor-like module  
  0.0000000038   3057-3094   LDL receptor-like module  
  0.00000000537   1213-1248   LDL receptor-like module  
  0.00000000628   3570-3610   LDL receptor-like module  
  0.00000000812   52-88   LDL receptor-like module  
  0.00000000982   3824-3860   LDL receptor-like module  
  0.000000017   1169-1207   LDL receptor-like module  
  0.0000000209   3531-3573   LDL receptor-like module  
  0.0000000223   3737-3777   LDL receptor-like module  
  0.0000000314   248-285   LDL receptor-like module  
  0.0000000393   2797-2843   LDL receptor-like module  
  0.0000000812   2925-2969   LDL receptor-like module  
  0.000000157   133-167   LDL receptor-like module  
  0.000000668   3867-3904   LDL receptor-like module  
  0.000000942   3665-3698   LDL receptor-like module  
  0.00000102   1294-1330   LDL receptor-like module  
  0.00000223   2759-2801   LDL receptor-like module  
ENSMGAP00000011323   0.0000000000236   264-304   LDL receptor-like module  
  0.000000000131   309-345   LDL receptor-like module  
  0.000000000131   228-266   LDL receptor-like module  
  0.000000000196   143-182   LDL receptor-like module  
  0.000000000367   66-105   LDL receptor-like module  
  0.00000000353   187-225   LDL receptor-like module  
  0.00000000563   105-142   LDL receptor-like module  
  0.0000017   26-68   LDL receptor-like module  
ENSMGAP00000011544   0.00000000196   211-249   LDL receptor-like module  
  0.00000000563   251-295   LDL receptor-like module  
ENSMGAP00000011616   0.0000000118   322-360   LDL receptor-like module  
ENSMGAP00000011804   0.0000000000209   84-120   LDL receptor-like module  
  0.0000000000288   119-156   LDL receptor-like module  
  0.0000000000288   167-205   LDL receptor-like module  
  0.0000000000432   203-244   LDL receptor-like module  
  0.00000000314   3-40   LDL receptor-like module  
  0.0000000124   38-81   LDL receptor-like module  
  0.0000000497   249-284   LDL receptor-like module  
ENSMGAP00000011850   0.0000000196   43-81   LDL receptor-like module  
  0.00000327   94-125   LDL receptor-like module  
  0.00327   131-171   LDL receptor-like module  
ENSMGAP00000012013   0.0000000185   65-105   LDL receptor-like module  
ENSMGAP00000012026   0.000000367   124-157   LDL receptor-like module  
ENSMGAP00000012658   0.0000000012   633-674   LDL receptor-like module  
  0.00000000249   366-406   LDL receptor-like module  
  0.00000000628   324-362   LDL receptor-like module  
  0.00000000759   558-595   LDL receptor-like module  
  0.0000000144   249-286   LDL receptor-like module  
  0.000000017   284-321   LDL receptor-like module  
  0.00000122   599-631   LDL receptor-like module  
ENSMGAP00000013027   0.000000000017   453-491   LDL receptor-like module  
  0.00000000537   168-204   LDL receptor-like module  
  0.000000115   215-257   LDL receptor-like module  
  0.000000118   414-452   LDL receptor-like module  
  0.000000956   377-414   LDL receptor-like module  
ENSMGAP00000013284   0.000000000144   1321-1358   LDL receptor-like module  
  0.000000000183   1082-1122   LDL receptor-like module  
  0.000000000249   1204-1240   LDL receptor-like module  
  0.000000000301   620-661   LDL receptor-like module  
  0.000000000314   489-525   LDL receptor-like module  
  0.000000000367   1444-1485   LDL receptor-like module  
  0.000000000615   1363-1407   LDL receptor-like module  
  0.000000000903   409-446   LDL receptor-like module  
  0.00000000113   532-566   LDL receptor-like module  
  0.0000000013   1165-1201   LDL receptor-like module  
  0.00000000209   1045-1080   LDL receptor-like module  
  0.00000000484   1284-1319   LDL receptor-like module  
  0.00000000615   1124-1161   LDL receptor-like module  
  0.00000000785   568-609   LDL receptor-like module  
  0.0000000157   1239-1278   LDL receptor-like module  
  0.0000000183   320-356   LDL receptor-like module  
  0.0000000458   449-491   LDL receptor-like module  
  0.000000196   243-281   LDL receptor-like module  
  0.000000432   372-405   LDL receptor-like module  
  0.000000445   284-316   LDL receptor-like module  
  0.0000072   1409-1441   LDL receptor-like module  
ENSMGAP00000013286   0.0000000000393   768-810   LDL receptor-like module  
  0.0000000000942   809-848   LDL receptor-like module  
  0.000000000102   729-768   LDL receptor-like module  
  0.00000000011   853-891   LDL receptor-like module  
  0.000000000144   892-928   LDL receptor-like module  
  0.00000000157   940-976   LDL receptor-like module  
  0.000000144   987-1019   LDL receptor-like module  
  0.000000209   1022-1058   LDL receptor-like module  
ENSMGAP00000013311   0.00000288   469-501   LDL receptor-like module  
  0.000017   506-545   LDL receptor-like module  
  0.0000367   435-467   LDL receptor-like module  
ENSMGAP00000013312   0.000000000602   103-139   LDL receptor-like module  
ENSMGAP00000014652   0.000000000602   1335-1373   LDL receptor-like module  
  0.00000000209   1256-1296   LDL receptor-like module  
  0.00000000406   1297-1333   LDL receptor-like module  
ENSMGAP00000015237   0.000000617   329-368   LDL receptor-like module  
ENSMGAP00000015240   0.0000000000344   448-494   LDL receptor-like module  
  0.0000000157   523-562   LDL receptor-like module  
  0.0000421   482-519   LDL receptor-like module  
ENSMGAP00000015327   0.000000000196   657-697   LDL receptor-like module  
  0.000000102   199-236   LDL receptor-like module  
ENSMGAP00000015427   0.00000000733   98-140   LDL receptor-like module  
ENSMGAP00000015437   0.0000000123   75-113   LDL receptor-like module  
ENSMGAP00000016921   0.000000000576   7-40   LDL receptor-like module  
ENSMGAP00000017334   0.0000000000393   770-812   LDL receptor-like module  
  0.0000000000942   811-850   LDL receptor-like module  
  0.000000000102   731-770   LDL receptor-like module  
  0.00000000011   855-893   LDL receptor-like module  
  0.000000000144   894-930   LDL receptor-like module  
  0.00000000157   942-978   LDL receptor-like module  
  0.000000144   989-1021   LDL receptor-like module  
  0.000000209   1024-1060   LDL receptor-like module  
ENSMGAP00000018081   0.000000000000183   1319-1359   LDL receptor-like module  
  0.000000000038   1226-1264   LDL receptor-like module  
  0.000000000072   1100-1138   LDL receptor-like module  
  0.000000000111   1273-1308   LDL receptor-like module  
  0.000000000249   1061-1099   LDL receptor-like module  
  0.000000000916   980-1018   LDL receptor-like module  
  0.0000000236   1375-1412   LDL receptor-like module  
  0.0000000301   1142-1175   LDL receptor-like module  
  0.000000183   1025-1058   LDL receptor-like module  
  0.00000038   1418-1453   LDL receptor-like module  
  0.00000445   1179-1215   LDL receptor-like module  
ENSMGAP00000018536   0.0000000144   31-70   LDL receptor-like module  
  0.00000288   83-114   LDL receptor-like module  
ENSMGAP00000018606   0.0000000000393   771-813   LDL receptor-like module  
  0.0000000000956   812-851   LDL receptor-like module  
  0.000000000102   732-771   LDL receptor-like module  
  0.000000000111   856-894   LDL receptor-like module  
  0.000000000144   895-931   LDL receptor-like module  
  0.00000000157   943-979   LDL receptor-like module  
  0.000000144   990-1022   LDL receptor-like module  
  0.000000209   1025-1061   LDL receptor-like module  
ENSMGAP00000019052   0.00000000157   25-68   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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