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LDL receptor-like module superfamily domain assignments
in
Dipodomys ordii 76_1

Assignment details

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Dipodomys ordii 76_1 has 182 significant domains in 41 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000001679   0.0000000000288   309-346   LDL receptor-like module  
ENSDORP00000001993   0.0000000000117   1321-1359   LDL receptor-like module  
  0.000000000072   1100-1139   LDL receptor-like module  
  0.0000000000995   1228-1264   LDL receptor-like module  
  0.000000000262   1057-1098   LDL receptor-like module  
  0.00000000249   1273-1308   LDL receptor-like module  
  0.00000000511   1143-1176   LDL receptor-like module  
  0.000000262   1025-1058   LDL receptor-like module  
  0.00000196   1180-1215   LDL receptor-like module  
ENSDORP00000002139   0.0000131   101-129   LDL receptor-like module  
ENSDORP00000002177   0.0000000000484   425-462   LDL receptor-like module  
  0.0000000000995   137-174   LDL receptor-like module  
  0.00000000115   183-222   LDL receptor-like module  
  0.00000236   386-423   LDL receptor-like module  
  0.00101   347-384   LDL receptor-like module  
ENSDORP00000002841   0.000000000668   1307-1343   LDL receptor-like module  
  0.0000000055   1269-1305   LDL receptor-like module  
  0.00000000563   1229-1267   LDL receptor-like module  
ENSDORP00000002939   0.00000000223   259-295   LDL receptor-like module  
ENSDORP00000002940   0.000000000183   1306-1344   LDL receptor-like module  
  0.00000000236   1228-1266   LDL receptor-like module  
  0.00000000393   1268-1304   LDL receptor-like module  
ENSDORP00000003123   0.00000223   103-133   LDL receptor-like module  
ENSDORP00000004244   0.000000223   481-519   LDL receptor-like module  
ENSDORP00000004606   0.0000000000262   136-173   LDL receptor-like module  
  0.000000000034   395-432   LDL receptor-like module  
  0.000107   326-350   LDL receptor-like module  
  0.0012   353-394   LDL receptor-like module  
ENSDORP00000004620   0.000000956   131-162   LDL receptor-like module  
ENSDORP00000004773   0.00000157   223-261   LDL receptor-like module  
  0.0000353   450-487   LDL receptor-like module  
ENSDORP00000005161   0.00000000445   332-370   LDL receptor-like module  
ENSDORP00000006248   0.0000000000314   637-676   LDL receptor-like module  
  0.00000124   182-217   LDL receptor-like module  
ENSDORP00000006441   0.000000232   104-137   LDL receptor-like module  
ENSDORP00000007792   0.00000563   78-118   LDL receptor-like module  
ENSDORP00000008099   0.00000000406   142-182   LDL receptor-like module  
ENSDORP00000008670   0.00000000733   134-172   LDL receptor-like module  
ENSDORP00000009458   0.0000000707   170-207   LDL receptor-like module  
ENSDORP00000009491   0.0000000000327   25-67   LDL receptor-like module  
ENSDORP00000010199   0.00000000000916   2734-2776   LDL receptor-like module  
  0.000000000038   102-143   LDL receptor-like module  
  0.0000000000419   1265-1306   LDL receptor-like module  
  0.0000000000511   1106-1144   LDL receptor-like module  
  0.0000000000576   26-63   LDL receptor-like module  
  0.0000000000956   1148-1185   LDL receptor-like module  
  0.000000000157   2987-3028   LDL receptor-like module  
  0.000000000471   3795-3834   LDL receptor-like module  
  0.00000000055   2857-2897   LDL receptor-like module  
  0.000000000602   3070-3110   LDL receptor-like module  
  0.000000000654   3718-3755   LDL receptor-like module  
  0.000000000812   3510-3545   LDL receptor-like module  
  0.00000000089   3926-3962   LDL receptor-like module  
  0.000000000942   1066-1103   LDL receptor-like module  
  0.000000000982   2903-2940   LDL receptor-like module  
  0.00000000209   1230-1265   LDL receptor-like module  
  0.00000000262   3027-3069   LDL receptor-like module  
  0.00000000275   2699-2736   LDL receptor-like module  
  0.00000000393   3841-3878   LDL receptor-like module  
  0.00000000511   264-301   LDL receptor-like module  
  0.00000000615   1187-1224   LDL receptor-like module  
  0.00000000654   1022-1060   LDL receptor-like module  
  0.00000000654   221-260   LDL receptor-like module  
  0.0000000102   182-218   LDL receptor-like module  
  0.0000000102   66-101   LDL receptor-like module  
  0.0000000903   2820-2859   LDL receptor-like module  
  0.0000000916   2944-2987   LDL receptor-like module  
  0.000000122   3882-3920   LDL receptor-like module  
  0.000000327   1311-1347   LDL receptor-like module  
  0.000000393   3679-3714   LDL receptor-like module  
  0.000000615   3547-3588   LDL receptor-like module  
  0.00000275   147-180   LDL receptor-like module  
  0.0000432   2779-2818   LDL receptor-like module  
ENSDORP00000010377   0.0000000119   284-320   LDL receptor-like module  
ENSDORP00000010573   0.00000000000694   210-248   LDL receptor-like module  
  0.0000000524   287-326   LDL receptor-like module  
  0.0000969   246-282   LDL receptor-like module  
ENSDORP00000010630   0.0000000000223   80-121   LDL receptor-like module  
  0.0000000000602   3-46   LDL receptor-like module  
  0.000000000157   119-160   LDL receptor-like module  
  0.000000000367   169-205   LDL receptor-like module  
  0.00000000196   39-81   LDL receptor-like module  
ENSDORP00000011169   0.00000000223   257-291   LDL receptor-like module  
  0.000000654   222-254   LDL receptor-like module  
ENSDORP00000011583   0.0000000000106   53-90   LDL receptor-like module  
  0.000000000288   124-166   LDL receptor-like module  
ENSDORP00000011813   0.0000000000537   825-867   LDL receptor-like module  
  0.0000000000668   3541-3581   LDL receptor-like module  
  0.00000000017   906-945   LDL receptor-like module  
  0.000000000275   3625-3670   LDL receptor-like module  
  0.00000000034   3584-3619   LDL receptor-like module  
  0.00000000038   3462-3502   LDL receptor-like module  
  0.00000000038   3344-3384   LDL receptor-like module  
  0.000000000393   990-1027   LDL receptor-like module  
  0.000000000419   866-908   LDL receptor-like module  
  0.000000000602   951-988   LDL receptor-like module  
  0.000000000602   2668-2705   LDL receptor-like module  
  0.00000000103   2535-2575   LDL receptor-like module  
  0.00000000118   3-43   LDL receptor-like module  
  0.00000000144   1034-1074   LDL receptor-like module  
  0.00000000183   2708-2742   LDL receptor-like module  
  0.00000000497   3426-3461   LDL receptor-like module  
  0.00000000537   2790-2826   LDL receptor-like module  
  0.00000000969   2575-2614   LDL receptor-like module  
  0.00000000982   2828-2867   LDL receptor-like module  
  0.0000000107   3386-3424   LDL receptor-like module  
  0.0000000144   2748-2782   LDL receptor-like module  
  0.0000000209   3307-3342   LDL receptor-like module  
  0.0000000524   3713-3748   LDL receptor-like module  
  0.0000000877   2499-2536   LDL receptor-like module  
  0.000000249   48-82   LDL receptor-like module  
  0.000000393   1120-1155   LDL receptor-like module  
  0.000000668   1083-1117   LDL receptor-like module  
  0.00000124   2634-2664   LDL receptor-like module  
  0.0000157   3667-3703   LDL receptor-like module  
  0.000484   3507-3539   LDL receptor-like module  
ENSDORP00000012178   0.00000000000262   206-245   LDL receptor-like module  
  0.00000000000484   4-40   LDL receptor-like module  
  0.0000000000406   244-284   LDL receptor-like module  
  0.000000000127   125-162   LDL receptor-like module  
  0.000000000406   42-80   LDL receptor-like module  
  0.00000000119   159-197   LDL receptor-like module  
  0.00000000196   79-121   LDL receptor-like module  
  0.0000000681   290-326   LDL receptor-like module  
ENSDORP00000012274   0.000000000017   450-488   LDL receptor-like module  
  0.00000000196   164-200   LDL receptor-like module  
  0.000000128   411-449   LDL receptor-like module  
  0.000000183   212-254   LDL receptor-like module  
  0.000000733   374-411   LDL receptor-like module  
ENSDORP00000012296   0.000000000628   297-334   LDL receptor-like module  
  0.0000000034   373-412   LDL receptor-like module  
  0.0000000034   256-293   LDL receptor-like module  
  0.0000000903   333-368   LDL receptor-like module  
  0.000034   555-590   LDL receptor-like module  
ENSDORP00000012335   0.000000000772   283-319   LDL receptor-like module  
  0.00000000101   322-360   LDL receptor-like module  
  0.00000000102   367-410   LDL receptor-like module  
  0.0000000916   194-234   LDL receptor-like module  
ENSDORP00000012877   0.0000393   439-471   LDL receptor-like module  
ENSDORP00000013748   0.0000942   134-158   LDL receptor-like module  
ENSDORP00000013761   0.0000000524   265-298   LDL receptor-like module  
ENSDORP00000013885   0.00000183   483-514   LDL receptor-like module  
  0.0000288   448-481   LDL receptor-like module  
ENSDORP00000014001   0.000000127   89-130   LDL receptor-like module  
ENSDORP00000014033   0.0000000183   54-92   LDL receptor-like module  
ENSDORP00000014193   0.000000000183   3755-3792   LDL receptor-like module  
  0.000000000223   840-880   LDL receptor-like module  
  0.000000000223   920-959   LDL receptor-like module  
  0.000000000223   2885-2927   LDL receptor-like module  
  0.000000000262   876-921   LDL receptor-like module  
  0.000000000707   3348-3388   LDL receptor-like module  
  0.000000000785   3627-3663   LDL receptor-like module  
  0.00000000103   3471-3507   LDL receptor-like module  
  0.0000000011   3588-3625   LDL receptor-like module  
  0.0000000017   3548-3583   LDL receptor-like module  
  0.00000000223   2543-2584   LDL receptor-like module  
  0.0000000034   3310-3345   LDL receptor-like module  
  0.00000000511   964-1002   LDL receptor-like module  
  0.0000000055   3505-3545   LDL receptor-like module  
  0.00000000903   3431-3467   LDL receptor-like module  
  0.0000000103   2584-2623   LDL receptor-like module  
  0.0000000122   3669-3706   LDL receptor-like module  
  0.0000000157   3390-3427   LDL receptor-like module  
  0.0000000196   2798-2832   LDL receptor-like module  
  0.0000000236   2716-2754   LDL receptor-like module  
  0.0000000393   2638-2673   LDL receptor-like module  
  0.0000000694   2835-2875   LDL receptor-like module  
  0.000000327   2508-2545   LDL receptor-like module  
  0.000000432   1133-1169   LDL receptor-like module  
  0.000000864   76-110   LDL receptor-like module  
  0.00000772   2757-2793   LDL receptor-like module  
  0.0000864   1107-1130   LDL receptor-like module  
ENSDORP00000014731   0.000000000196   199-236   LDL receptor-like module  
  0.000000000236   78-117   LDL receptor-like module  
  0.000000000236   159-195   LDL receptor-like module  
  0.000000000654   252-286   LDL receptor-like module  
  0.00000000101   285-324   LDL receptor-like module  
  0.0000000102   115-158   LDL receptor-like module  
ENSDORP00000015010   0.0000000314   289-325   LDL receptor-like module  
ENSDORP00000015495   0.00000000126   531-569   LDL receptor-like module  
  0.0000000131   323-361   LDL receptor-like module  
  0.0000000144   250-287   LDL receptor-like module  
  0.0000000262   287-323   LDL receptor-like module  
  0.0000000497   364-398   LDL receptor-like module  
  0.000000123   607-647   LDL receptor-like module  
  0.00000419   574-605   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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