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LDL receptor-like module superfamily domain assignments
in
Mus musculus 63_37 (longest transcript per gene)

Assignment details

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Mus musculus 63_37 (longest transcript per gene) (Duplicate) has 220 significant domains in 45 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000000395   0.00000000511   111-150   LDL receptor-like module  
ENSMUSP00000002379   0.000000000017   46-83   LDL receptor-like module  
  0.000000000589   123-159   LDL receptor-like module  
ENSMUSP00000005352   0.00000000157   722-760   LDL receptor-like module  
  0.00000000524   374-411   LDL receptor-like module  
  0.00000000746   647-684   LDL receptor-like module  
  0.0000000131   337-374   LDL receptor-like module  
  0.0000000196   414-448   LDL receptor-like module  
  0.0000000497   451-482   LDL receptor-like module  
  0.00000236   690-720   LDL receptor-like module  
ENSMUSP00000017086   0.000000694   530-570   LDL receptor-like module  
  0.00000157   494-525   LDL receptor-like module  
  0.0000262   459-492   LDL receptor-like module  
ENSMUSP00000019931   0.00000000589   293-329   LDL receptor-like module  
ENSMUSP00000022749   0.000000196   113-145   LDL receptor-like module  
ENSMUSP00000022782   0.0000000000314   399-436   LDL receptor-like module  
  0.0000000000367   140-178   LDL receptor-like module  
  0.000107   329-354   LDL receptor-like module  
  0.00113   357-398   LDL receptor-like module  
ENSMUSP00000022916   0.000000000017   450-488   LDL receptor-like module  
  0.00000000432   164-200   LDL receptor-like module  
  0.000000128   411-449   LDL receptor-like module  
  0.000000183   211-254   LDL receptor-like module  
  0.000000733   374-411   LDL receptor-like module  
ENSMUSP00000023566   0.0000000000681   684-723   LDL receptor-like module  
  0.00000445   228-264   LDL receptor-like module  
ENSMUSP00000025856   0.000000000916   1334-1369   LDL receptor-like module  
  0.00000000144   1296-1332   LDL receptor-like module  
  0.00000000249   1255-1295   LDL receptor-like module  
ENSMUSP00000028689   0.0000000000275   264-304   LDL receptor-like module  
  0.000000000262   228-266   LDL receptor-like module  
  0.000000000471   143-183   LDL receptor-like module  
  0.000000000641   66-105   LDL receptor-like module  
  0.000000000733   309-345   LDL receptor-like module  
  0.00000000471   105-142   LDL receptor-like module  
  0.00000000851   187-225   LDL receptor-like module  
  0.00000183   26-68   LDL receptor-like module  
ENSMUSP00000028783   0.00000000327   312-350   LDL receptor-like module  
ENSMUSP00000031663   0.000000144   122-155   LDL receptor-like module  
ENSMUSP00000032322   0.00000000126   1325-1363   LDL receptor-like module  
  0.00000000236   1246-1286   LDL receptor-like module  
  0.0000000038   1287-1323   LDL receptor-like module  
ENSMUSP00000034478   0.00000000055   525-561   LDL receptor-like module  
  0.00000000131   486-525   LDL receptor-like module  
  0.00000000209   453-488   LDL receptor-like module  
  0.000000729   564-604   LDL receptor-like module  
ENSMUSP00000034599   0.000000157   53-91   LDL receptor-like module  
ENSMUSP00000034654   0.00000000746   263-300   LDL receptor-like module  
  0.028   427-457   LDL receptor-like module  
ENSMUSP00000034713   0.0000000000275   142-182   LDL receptor-like module  
  0.0000000000301   103-143   LDL receptor-like module  
  0.0000000000576   26-64   LDL receptor-like module  
  0.00000000012   196-233   LDL receptor-like module  
  0.000000000497   62-104   LDL receptor-like module  
  0.000000000524   231-272   LDL receptor-like module  
ENSMUSP00000044004   0.0000000000458   849-891   LDL receptor-like module  
  0.000000000119   3570-3610   LDL receptor-like module  
  0.00000000017   930-969   LDL receptor-like module  
  0.000000000223   2694-2731   LDL receptor-like module  
  0.000000000223   3612-3648   LDL receptor-like module  
  0.000000000236   3654-3699   LDL receptor-like module  
  0.00000000034   25-64   LDL receptor-like module  
  0.00000000034   3488-3528   LDL receptor-like module  
  0.000000000393   1014-1051   LDL receptor-like module  
  0.000000000393   3370-3410   LDL receptor-like module  
  0.000000000419   890-932   LDL receptor-like module  
  0.000000000563   975-1012   LDL receptor-like module  
  0.000000000838   3532-3571   LDL receptor-like module  
  0.00000000103   2561-2601   LDL receptor-like module  
  0.00000000118   1058-1098   LDL receptor-like module  
  0.00000000236   2734-2768   LDL receptor-like module  
  0.0000000034   3449-3486   LDL receptor-like module  
  0.00000000537   2816-2852   LDL receptor-like module  
  0.00000000733   2854-2893   LDL receptor-like module  
  0.0000000107   3412-3450   LDL receptor-like module  
  0.0000000111   2601-2640   LDL receptor-like module  
  0.0000000124   3332-3367   LDL receptor-like module  
  0.0000000209   2774-2808   LDL receptor-like module  
  0.0000000877   2525-2562   LDL receptor-like module  
  0.000000089   3742-3777   LDL receptor-like module  
  0.000000111   72-106   LDL receptor-like module  
  0.000000196   1144-1179   LDL receptor-like module  
  0.000000563   1107-1141   LDL receptor-like module  
  0.00000126   2660-2690   LDL receptor-like module  
  0.0000117   3696-3732   LDL receptor-like module  
ENSMUSP00000044975   0.0000000000131   469-514   LDL receptor-like module  
  0.000000072   544-583   LDL receptor-like module  
  0.0000537   503-539   LDL receptor-like module  
ENSMUSP00000054134   0.0000000000262   29-65   LDL receptor-like module  
  0.000000000484   70-107   LDL receptor-like module  
  0.000000000511   110-147   LDL receptor-like module  
ENSMUSP00000054275   0.000000000131   3791-3828   LDL receptor-like module  
  0.000000000144   873-912   LDL receptor-like module  
  0.000000000209   908-953   LDL receptor-like module  
  0.000000000236   3662-3698   LDL receptor-like module  
  0.000000000262   951-990   LDL receptor-like module  
  0.000000000327   2790-2826   LDL receptor-like module  
  0.000000000995   3383-3422   LDL receptor-like module  
  0.00000000113   3622-3660   LDL receptor-like module  
  0.00000000115   1035-1072   LDL receptor-like module  
  0.00000000157   2921-2962   LDL receptor-like module  
  0.00000000157   3506-3542   LDL receptor-like module  
  0.00000000209   2833-2868   LDL receptor-like module  
  0.00000000209   3583-3618   LDL receptor-like module  
  0.00000000223   2710-2747   LDL receptor-like module  
  0.00000000249   3704-3748   LDL receptor-like module  
  0.00000000393   1083-1119   LDL receptor-like module  
  0.00000000471   3540-3580   LDL receptor-like module  
  0.00000000524   996-1034   LDL receptor-like module  
  0.00000000537   3346-3381   LDL receptor-like module  
  0.00000000733   2576-2617   LDL receptor-like module  
  0.00000000903   3466-3502   LDL receptor-like module  
  0.000000011   3425-3462   LDL receptor-like module  
  0.000000017   2620-2657   LDL receptor-like module  
  0.0000000249   2869-2910   LDL receptor-like module  
  0.0000000497   60-96   LDL receptor-like module  
  0.000000113   2750-2787   LDL receptor-like module  
  0.000000131   2670-2706   LDL receptor-like module  
  0.000000589   1125-1162   LDL receptor-like module  
  0.000000615   1165-1201   LDL receptor-like module  
  0.000000681   107-142   LDL receptor-like module  
  0.00000114   2541-2578   LDL receptor-like module  
  0.0000017   3750-3782   LDL receptor-like module  
ENSMUSP00000057340   0.0000000327   291-327   LDL receptor-like module  
ENSMUSP00000058613   0.00000000000654   1416-1454   LDL receptor-like module  
  0.0000000000537   1195-1233   LDL receptor-like module  
  0.0000000000825   1153-1193   LDL receptor-like module  
  0.000000000209   1323-1359   LDL receptor-like module  
  0.00000000196   1075-1113   LDL receptor-like module  
  0.00000000209   1238-1271   LDL receptor-like module  
  0.00000000445   1370-1403   LDL receptor-like module  
  0.0000000209   1470-1507   LDL receptor-like module  
  0.0000000458   1510-1549   LDL receptor-like module  
  0.000000301   1120-1153   LDL receptor-like module  
  0.0000034   1274-1310   LDL receptor-like module  
ENSMUSP00000067541   0.000000262   89-130   LDL receptor-like module  
ENSMUSP00000067897   0.00000000733   25-63   LDL receptor-like module  
ENSMUSP00000068471   0.0000000759   14-48   LDL receptor-like module  
ENSMUSP00000077074   0.000000144   264-299   LDL receptor-like module  
  0.000000157   230-261   LDL receptor-like module  
ENSMUSP00000077611   0.000000275   26-63   LDL receptor-like module  
ENSMUSP00000079752   0.0000000000223   2736-2777   LDL receptor-like module  
  0.0000000000275   101-143   LDL receptor-like module  
  0.0000000000353   2988-3029   LDL receptor-like module  
  0.0000000000367   1106-1144   LDL receptor-like module  
  0.0000000000406   1266-1307   LDL receptor-like module  
  0.0000000000812   1148-1185   LDL receptor-like module  
  0.000000000109   3629-3668   LDL receptor-like module  
  0.000000000157   26-62   LDL receptor-like module  
  0.00000000034   3720-3757   LDL receptor-like module  
  0.000000000393   1021-1059   LDL receptor-like module  
  0.000000000445   3071-3111   LDL receptor-like module  
  0.000000000484   3756-3795   LDL receptor-like module  
  0.000000000563   2906-2942   LDL receptor-like module  
  0.000000000576   3512-3549   LDL receptor-like module  
  0.000000000668   3799-3836   LDL receptor-like module  
  0.000000000851   1065-1102   LDL receptor-like module  
  0.00000000102   2700-2744   LDL receptor-like module  
  0.00000000157   3028-3070   LDL receptor-like module  
  0.00000000209   3587-3630   LDL receptor-like module  
  0.00000000301   1227-1265   LDL receptor-like module  
  0.00000000301   3842-3880   LDL receptor-like module  
  0.00000000432   181-218   LDL receptor-like module  
  0.00000000458   2858-2899   LDL receptor-like module  
  0.00000000511   1187-1224   LDL receptor-like module  
  0.00000000602   221-259   LDL receptor-like module  
  0.0000000131   3927-3964   LDL receptor-like module  
  0.0000000144   2814-2859   LDL receptor-like module  
  0.0000000209   3549-3590   LDL receptor-like module  
  0.0000000209   65-101   LDL receptor-like module  
  0.0000000223   3884-3922   LDL receptor-like module  
  0.000000122   2782-2819   LDL receptor-like module  
  0.000000131   1311-1347   LDL receptor-like module  
  0.000000196   2945-2989   LDL receptor-like module  
  0.000000301   146-180   LDL receptor-like module  
  0.000000406   3683-3716   LDL receptor-like module  
ENSMUSP00000083840   0.0000327   441-473   LDL receptor-like module  
ENSMUSP00000092521   0.0000000589   92-126   LDL receptor-like module  
  0.0000942   139-168   LDL receptor-like module  
  0.000249   175-216   LDL receptor-like module  
ENSMUSP00000092735   0.00000000838   229-270   LDL receptor-like module  
  0.00000733   457-495   LDL receptor-like module  
  0.00816   35-56   LDL receptor-like module  
ENSMUSP00000100970   0.00000645   188-227   LDL receptor-like module  
ENSMUSP00000105308   0.00000000812   324-360   LDL receptor-like module  
ENSMUSP00000106317   0.000000491   77-119   LDL receptor-like module  
ENSMUSP00000110196   0.0000000668   92-130   LDL receptor-like module  
ENSMUSP00000114026   0.0000000000563   474-511   LDL receptor-like module  
  0.000000000262   185-222   LDL receptor-like module  
  0.00000000117   231-270   LDL receptor-like module  
  0.00000236   435-472   LDL receptor-like module  
  0.0038   385-433   LDL receptor-like module  
ENSMUSP00000115071   0.0000000000484   25-67   LDL receptor-like module  
ENSMUSP00000115854   0.000000000223   39-75   LDL receptor-like module  
  0.000000000367   250-286   LDL receptor-like module  
  0.000000000458   159-195   LDL receptor-like module  
  0.000000000537   199-235   LDL receptor-like module  
  0.000000000694   290-326   LDL receptor-like module  
  0.00000000101   78-116   LDL receptor-like module  
  0.0000000432   115-158   LDL receptor-like module  
  0.000000183   330-368   LDL receptor-like module  
ENSMUSP00000116869   0.00000000236   224-261   LDL receptor-like module  
  0.00000000288   180-217   LDL receptor-like module  
  0.00000484   264-301   LDL receptor-like module  
ENSMUSP00000125693   0.00000000183   138-173   LDL receptor-like module  
ENSMUSP00000127329   0.00000000000275   234-273   LDL receptor-like module  
  0.00000000000589   31-68   LDL receptor-like module  
  0.0000000000419   272-312   LDL receptor-like module  
  0.000000000157   148-188   LDL receptor-like module  
  0.000000000353   70-108   LDL receptor-like module  
  0.000000000668   187-225   LDL receptor-like module  
  0.00000000144   107-149   LDL receptor-like module  
  0.0000000209   318-355   LDL receptor-like module  
ENSMUSP00000131316   0.000000000668   367-411   LDL receptor-like module  
  0.00000000117   324-361   LDL receptor-like module  
  0.00000000123   283-319   LDL receptor-like module  
  0.0000000537   194-234   LDL receptor-like module  
ENSMUSP00000131401   0.00000000223   1414-1455   LDL receptor-like module  
  0.0000000038   1565-1602   LDL receptor-like module  
  0.00000000589   2441-2477   LDL receptor-like module  
  0.00000000916   1378-1414   LDL receptor-like module  
  0.0000000223   2230-2267   LDL receptor-like module  
  0.0000000576   2381-2420   LDL receptor-like module  
  0.0000000589   1454-1490   LDL receptor-like module  
  0.0000000668   1494-1532   LDL receptor-like module  
  0.00000249   1605-1642   LDL receptor-like module  
  0.000223   1658-1683   LDL receptor-like module  
 
Weak hits:
ENSMUSP00000034597   0.000249   185-208   LDL receptor-like module  
ENSMUSP00000110987   0.000101   68-108   LDL receptor-like module  
  0.000144   32-66   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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