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SEA domain superfamily domain assignments
in
Bos taurus 76_3.1

Assignment details

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Bos taurus 76_3.1 has 42 significant domains in 26 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000000788   4.32e-16   64-165   SEA domain  
ENSBTAP00000000958   0.00000719   65-128   SEA domain  
ENSBTAP00000002505   3.01e-24   37-156   SEA domain  
ENSBTAP00000005785   4.71e-20   49-173   SEA domain  
ENSBTAP00000014051   9.42e-20   368-469   SEA domain  
ENSBTAP00000017563   0.00000000000144   1136-1212   SEA domain  
ENSBTAP00000020053   9.42e-23   88-217   SEA domain  
ENSBTAP00000020801   1.09e-18   915-1025   SEA domain  
  0.000000000000392   248-342   SEA domain  
ENSBTAP00000026272   0.000000209   87-151   SEA domain  
ENSBTAP00000027052   7.06e-16   37-165   SEA domain  
ENSBTAP00000028218   0.00000000129   209-292   SEA domain  
ENSBTAP00000028795   0.0000275   188-279   SEA domain  
ENSBTAP00000035796   0.00000785   179-262   SEA domain  
ENSBTAP00000036577   2.09e-26   38-162   SEA domain  
ENSBTAP00000041755   0.000000144   281-357   SEA domain  
ENSBTAP00000042983   0.0000000000327   85-165   SEA domain  
ENSBTAP00000043629   0.000000000000275   436-548   SEA domain  
ENSBTAP00000048802   2.75e-45   445-571   SEA domain  
  3.01e-40   290-417   SEA domain  
  2.62e-39   135-258   SEA domain  
  2.09e-37   580-704   SEA domain  
  1.15e-34   986-1107   SEA domain  
  1.83e-34   734-858   SEA domain  
  1.31e-31   1-103   SEA domain  
  0.0000000000000915   867-972   SEA domain  
ENSBTAP00000050393   3.14e-23   52-178   SEA domain  
ENSBTAP00000050450   1.7e-22   52-176   SEA domain  
ENSBTAP00000054149   2.35e-16   64-166   SEA domain  
ENSBTAP00000054331   3.14e-45   445-571   SEA domain  
  3.4e-40   290-417   SEA domain  
  3.01e-39   135-258   SEA domain  
  6.28e-38   597-722   SEA domain  
  2.35e-37   734-857   SEA domain  
  1.31e-34   1117-1238   SEA domain  
  3.27e-34   866-989   SEA domain  
  1.57e-31   1-103   SEA domain  
  0.000000000000105   998-1103   SEA domain  
ENSBTAP00000054342   0.00000000000785   2-90   SEA domain  
ENSBTAP00000056085   1.29e-18   137-252   SEA domain  
ENSBTAP00000056250   0.00000000157   564-671   SEA domain  
ENSBTAP00000056388   0.0000000017   587-694   SEA domain  
 
Weak hits:
ENSBTAP00000022018   0.00353   127-184   SEA domain  
ENSBTAP00000052739   0.00248   93-150   SEA domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   23168 23168
No Yes Homo sapiens 76_38 Human 94 56
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 19 17
No Yes Gorilla gorilla 76_3.1 Western gorilla 34 26
No Yes Pongo abelii 76_2 Sumatran orangutan 25 18
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 18 17
No Yes Papio anubis 76 Olive baboon 32 19
No Yes Macaca mulatta 76_1 Rhesus monkey 32 24
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 59 40
No Yes Otolemur garnettii 76_3 Small-eared galago 34 22
No Yes Microcebus murinus 76_1 Gray mouse lemur 18 12
No Yes Rattus norvegicus 76_5.0 Norway rat 25 23
No Yes Mus musculus 76_38 House mouse 31 27
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 14 14
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 52 24
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 27 19
No Yes Cavia porcellus 76_3 Domestic guinea pig 24 15
No Yes Oryctolagus cuniculus 76_2 Rabbit 24 20
No Yes Ochotona princeps 76 American pika 18 11
No Yes Tupaia belangeri 76 Northern tree shrew 18 10
No Yes Sus scrofa 76_10.2 Pig 46 30
No Yes Bos taurus 76_3.1 Cattle 42 26
No Yes Ovis aries 76_3.1 Sheep 40 28
No Yes Vicugna pacos 76_1 Alpaca 10 8
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 17 15
No Yes Mustela putorius furo 76_1.0 Domestic ferret 34 21
No Yes Ailuropoda melanoleuca 76_1 Giant panda 28 21
No Yes Canis familiaris 76_3.1 Dog 35 24
No Yes Felis catus 76_6.2 Domestic cat 33 23
No Yes Equus caballus 76_2 Horse 38 24
No Yes Myotis lucifugus 76_2.0 Little brown bat 27 15
No Yes Pteropus vampyrus 76_1 Large flying fox 23 14
No Yes Sorex araneus 76_1 European shrew 10 9
No Yes Erinaceus europaeus 76 Western European hedgehog 11 9
No Yes Procavia capensis 76_1 Cape rock hyrax 17 10
No Yes Loxodonta africana 76_3 African savanna elephant 31 21
No Yes Echinops telfairi 76 Small Madagascar hedgehog 20 12
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 33 19
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 7
No Yes Macropus eugenii 76_1.0 Tammar wallaby 18 12
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 31 27
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 106 52
No Yes Ornithorhynchus anatinus 76_5 Platypus 24 21
No Yes Saccoglossus kowalevskii v3.0   55 29
No Yes Meleagris gallopavo 76_2 Turkey 18 12
No Yes Gallus gallus 76_4 Chicken 21 13
No Yes Anas platyrhynchos 76_1.0 Mallard 23 14
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 19 12
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 17 14
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 26 13
No Yes Anolis carolinensis 76_2.0 Green anole 20 16
No Yes Xenopus laevis African clawed frog 5 5
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 20 18
No Yes Latimeria chalumnae 76_1 Coelacanth 22 11
No Yes Lepisosteus oculatus 76 Spotted gar 25 22
No Yes Gadus morhua 76_1 Atlantic cod 16 14
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 19 16
No Yes Takifugu rubripes 76_4 Torafugu 71 54
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 25 20
No Yes Oryzias latipes 76_1 Japanese medaka 9 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 18 15
No Yes Poecilia formosa 76 Amazon molly 19 16
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 29 24
No Yes Astyanax mexicanus 76 Mexican tetra 22 20
No Yes Danio rerio 76_9 Zebrafish 43 39
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 34 27
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 30 18
No Yes Lottia gigantea Owl limpet 16 7
No Yes Capitella sp. I   4 4
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 4
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 4
No Yes Linepithema humile v1.1 Argentine ant 3 3
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 3
No Yes Atta cephalotes v1.1   4 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 4
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 4 4
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 3
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 5 5
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Acyrthosiphon pisum Pea aphid 6 6
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   4 4
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 3 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 3
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   5 5
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 6 6
No Yes Caenorhabditis japonica   3 3
No Yes Caenorhabditis brenneri   4 4
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2   4 4
No Yes Trichinella spiralis 22   1 1
No Yes Schistosoma mansoni   1 1
No Yes Acropora digitifera v1.0   31 31
No Yes Nematostella vectensis 1.0 Starlet sea anemone 10 10
No Yes Hydra vulgaris   9 9
No Yes Trichoplax adhaerens   3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 25 19
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 3 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 95 51
No Yes Homo sapiens (NCBI version) Human 50 33
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 21 19
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Homo sapiens 69_37 Human 48 22
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 19 17
No Yes Gorilla gorilla 69_3.1 Western gorilla 24 20
No Yes Pongo abelii 69_2 Sumatran orangutan 24 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 17 16
No Yes Macaca mulatta 69_1 Rhesus monkey 24 16
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 26 18
No Yes Otolemur garnettii 69_3 Small-eared galago 34 22
No Yes Microcebus murinus 69_1 Gray mouse lemur 18 12
No Yes Rattus norvegicus 69_3.4 Norway rat 18 16
No Yes Mus musculus 69_38 House mouse 21 19
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 14 14
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 31 18
No Yes Cavia porcellus 69_3 Domestic guinea pig 24 15
No Yes Oryctolagus cuniculus 69_2 Rabbit 19 18
No Yes Ochotona princeps 69 American pika 18 11
No Yes Tupaia belangeri 69 Northern tree shrew 18 10
No Yes Sus scrofa 69_10.2 Pig 27 19
No Yes Bos taurus 69_3.1 Cattle 30 21
No Yes Vicugna pacos 69_1 Alpaca 10 8
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 15 13
No Yes Mustela putorius furo 69_1.0 Domestic ferret 32 19
No Yes Ailuropoda melanoleuca 69_1 Giant panda 27 20
No Yes Canis familiaris 69_3.1 Dog 26 17
No Yes Felis catus 69 Domestic cat 11 8
No Yes Equus caballus 69_2 Horse 34 22
No Yes Myotis lucifugus 69_2.0 Little brown bat 27 15
No Yes Pteropus vampyrus 69_1 Large flying fox 23 14
No Yes Sorex araneus 69_1 European shrew 10 9
No Yes Erinaceus europaeus 69 Western European hedgehog 11 9
No Yes Procavia capensis 69_1 Cape rock hyrax 17 10
No Yes Loxodonta africana 69_3 African savanna elephant 25 16
No Yes Echinops telfairi 69 Small Madagascar hedgehog 20 12
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 14 10
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 7
No Yes Macropus eugenii 69_1.0 Tammar wallaby 18 12
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 23 20
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 103 50
No Yes Ornithorhynchus anatinus 69_5 Platypus 20 18
No Yes Meleagris gallopavo 69_2 Turkey 16 10
No Yes Gallus gallus 69_2 Chicken 18 10
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 19 12
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 22 10
No Yes Anolis carolinensis 69_2.0 Green anole 17 13
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 13 12
No Yes Latimeria chalumnae 69_1 Coelacanth 21 10
No Yes Gadus morhua 69_1 Atlantic cod 12 10
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 17 14
No Yes Takifugu rubripes 69_4 Torafugu 13 10
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 18 14
No Yes Oryzias latipes 69_1 Japanese medaka 8 8
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 18 15
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 21 16
No Yes Danio rerio 69_9 Zebrafish 27 24
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 3 3
No Yes NCBI 2017_08 genome   11949 8312
No Yes STRING v9.0.5 (STRING)   659 521
No Yes Uniprot 2018_03 genome   5311 4045
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   30 20

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