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CAD & PB1 domains superfamily domain assignments
in
Phyllostachys heterocyclavar. pubescens

Assignment details

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Phyllostachys heterocyclavar. pubescens has 99 significant domains in 98 proteins.

     

Sequence ID   Evalue   Region   Family  
PH01000002G1960   0.0000000000897   410-452   PB1 domain  
PH01000005G3640   0.00000000000118   265-336   PB1 domain  
PH01000015G0650   1.5e-21   62-163   PB1 domain  
PH01000020G0020   0.000000000131   175-255   PB1 domain  
  0.000000000152   118-179   PB1 domain  
PH01000025G0860   2.35e-20   105-194   PB1 domain  
PH01000025G1600   1.77e-16   143-234   PB1 domain  
PH01000025G1630   9.81e-20   88-178   PB1 domain  
PH01000036G1710   0.00000000000000301   51-124   PB1 domain  
PH01000057G1420   0.000000015   820-903   PB1 domain  
PH01000058G2170   1.57e-19   370-472   PB1 domain  
PH01000061G1230   1.67e-17   52-139   PB1 domain  
PH01000075G0200   6.08e-17   84-181   PB1 domain  
PH01000087G1340   0.0000111   664-738   PB1 domain  
PH01000093G0670   0.000000118   609-696   PB1 domain  
PH01000105G1710   5.4e-20   75-166   PB1 domain  
PH01000116G0910   0.0000000000347   711-783   PB1 domain  
PH01000158G0690   0.0000000000000412   158-243   PB1 domain  
PH01000176G0540   0.000000373   1000-1067   PB1 domain  
PH01000183G0570   0.00000144   763-839   PB1 domain  
PH01000212G0710   0.00000000000000726   101-195   PB1 domain  
PH01000214G1340   0.000000000471   214-315   PB1 domain  
PH01000222G0180   0.0000000000497   551-626   PB1 domain  
PH01000227G0020   0.000000543   770-852   PB1 domain  
PH01000236G1170   6.73e-21   808-902   PB1 domain  
PH01000243G0600   1.28e-22   771-865   PB1 domain  
PH01000259G1120   0.0000785   838-904   PB1 domain  
PH01000262G1070   1.47e-20   734-831   PB1 domain  
PH01000281G0480   6.57e-21   73-174   PB1 domain  
PH01000291G1250   3.92e-20   832-926   PB1 domain  
PH01000356G1070   3.78e-18   201-292   PB1 domain  
PH01000381G0260   0.000000000000925   12-98   PB1 domain  
PH01000382G0560   0.00000000000438   96-166   PB1 domain  
  0.00314   46-68   PB1 domain  
PH01000384G0170   0.0000000000477   656-731   PB1 domain  
PH01000429G1070   0.00000000000182   195-301   PB1 domain  
PH01000483G0220   0.000000245   725-810   PB1 domain  
PH01000497G0760   1.08e-16   102-193   PB1 domain  
PH01000548G0300   0.00000049   873-931   PB1 domain  
PH01000554G0550   4.51e-17   111-204   PB1 domain  
PH01000582G0720   4.12e-21   251-348   PB1 domain  
PH01000592G0620   4.71e-18   98-192   PB1 domain  
PH01000600G0290   5.61e-22   105-197   PB1 domain  
PH01000623G0440   0.0000804   995-1059   PB1 domain  
PH01000626G0040   0.00000000285   587-662   PB1 domain  
PH01000627G0150   0.000000000000922   218-319   PB1 domain  
PH01000653G0760   1.83e-21   733-830   PB1 domain  
PH01000667G0020   0.0000000235   532-607   PB1 domain  
PH01000667G0080   2.55e-20   845-940   PB1 domain  
PH01000676G0500   0.0000000108   144-235   PB1 domain  
PH01000812G0170   0.000000000000147   26-64   PB1 domain  
PH01001098G0440   0.00000000000000181   85-152   PB1 domain  
PH01001119G0310   6.87e-21   87-167   PB1 domain  
PH01001154G0590   0.00000628   167-191   PB1 domain  
PH01001175G0280   7.85e-19   86-183   PB1 domain  
PH01001222G0080   4.91e-16   236-336   PB1 domain  
PH01001395G0030   1.69e-22   181-270   PB1 domain  
PH01001415G0290   0.0000000000000589   47-144   PB1 domain  
PH01001420G0080   0.0000000275   663-727   PB1 domain  
PH01001446G0210   4.12e-19   84-179   PB1 domain  
PH01001495G0120   0.000000000000021   250-315   PB1 domain  
PH01001532G0390   0.0000000000000108   416-505   PB1 domain  
PH01001555G0390   0.000000167   737-822   PB1 domain  
PH01001567G0470   6.54e-19   147-249   PB1 domain  
PH01001580G0170   5.2e-18   219-309   PB1 domain  
PH01001669G0110   4.51e-19   146-251   PB1 domain  
PH01001792G0060   0.00000000657   144-237   PB1 domain  
PH01001870G0100   2.13e-22   796-879   PB1 domain  
PH01001899G0250   0.0000137   654-728   PB1 domain  
PH01002160G0180   0.000000000589   683-757   PB1 domain  
PH01002230G0220   0.00000000000000523   416-506   PB1 domain  
PH01002493G0240   2.04e-21   181-268   PB1 domain  
PH01002549G0140   0.000000471   479-533   PB1 domain  
PH01002806G0200   0.0000000000162   717-790   PB1 domain  
PH01002857G0060   0.000000000373   579-655   PB1 domain  
PH01002859G0100   5.49e-22   40-130   PB1 domain  
PH01002964G0120   1.61e-20   54-146   PB1 domain  
PH01003096G0200   0.0000000137   811-896   PB1 domain  
PH01003159G0070   2.94e-21   142-244   PB1 domain  
PH01003159G0100   8.34e-19   117-207   PB1 domain  
PH01003192G0080   1.33e-21   38-128   PB1 domain  
PH01003223G0120   0.0000000000000216   48-147   PB1 domain  
PH01003333G0020   0.000000000118   52-147   PB1 domain  
PH01003595G0090   8.34e-20   132-220   PB1 domain  
PH01003599G0120   8.97e-16   292-383   PB1 domain  
PH01003631G0130   0.000000000000491   722-795   PB1 domain  
PH01003898G0120   0.0000000000561   20-102   PB1 domain  
PH01004029G0080   9.16e-20   602-693   PB1 domain  
PH01004159G0030   0.00000000000000402   99-203   PB1 domain  
PH01004448G0020   0.00000000000618   198-302   PB1 domain  
PH01004683G0020   7.36e-20   45-139   PB1 domain  
PH01004831G0060   4.58e-16   314-407   PB1 domain  
PH01005032G0130   1.54e-18   63-156   PB1 domain  
PH01005193G0070   2.84e-22   145-243   PB1 domain  
PH01005322G0010   0.00000000000407   664-737   PB1 domain  
PH01005434G0050   2.55e-21   133-239   PB1 domain  
PH01005757G0030   9.02e-20   135-237   PB1 domain  
PH01007612G0010   0.0000000000105   544-619   PB1 domain  
PH01014988G0010   0.0000000000000304   98-188   PB1 domain  
PH01016946G0010   9.16e-16   54-131   PB1 domain  
 
Weak hits:
PH01000002G3110   0.000902   687-715   PB1 domain  
PH01000003G3650   0.000186   141-182   PB1 domain  
PH01000114G0050   0.000196   981-1037   PB1 domain  
PH01000436G0400   0.0402   43-111   PB1 domain  
PH01001026G0300   0.049   632-703   PB1 domain  
PH01001671G0190   0.000844   94-135   PB1 domain  
PH01005433G0070   0.0863   676-746   CAD domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   60222 60222
No Yes Homo sapiens 76_38 Human 75 75
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 21
No Yes Pongo abelii 76_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 22
No Yes Papio anubis 76 Olive baboon 21 21
No Yes Macaca mulatta 76_1 Rhesus monkey 27 27
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 33 33
No Yes Otolemur garnettii 76_3 Small-eared galago 20 20
No Yes Microcebus murinus 76_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 76_5.0 Norway rat 21 21
No Yes Mus musculus 76_38 House mouse 43 43
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 18 18
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 32 32
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 21
No Yes Oryctolagus cuniculus 76_2 Rabbit 17 17
No Yes Ochotona princeps 76 American pika 13 13
No Yes Tupaia belangeri 76 Northern tree shrew 12 12
No Yes Sus scrofa 76_10.2 Pig 24 24
No Yes Bos taurus 76_3.1 Cattle 22 22
No Yes Ovis aries 76_3.1 Sheep 20 20
No Yes Vicugna pacos 76_1 Alpaca 12 12
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 76_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 76_1 Giant panda 23 23
No Yes Canis familiaris 76_3.1 Dog 22 22
No Yes Felis catus 76_6.2 Domestic cat 21 21
No Yes Equus caballus 76_2 Horse 20 20
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 76_1 Large flying fox 16 16
No Yes Sorex araneus 76_1 European shrew 9 9
No Yes Erinaceus europaeus 76 Western European hedgehog 12 12
No Yes Procavia capensis 76_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 76_3 African savanna elephant 22 22
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 25 24
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 21 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 76_5 Platypus 18 18
No Yes Saccoglossus kowalevskii v3.0   38 38
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 21 21
No Yes Gallus gallus 76_4 Chicken 19 19
No Yes Anas platyrhynchos 76_1.0 Mallard 19 19
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 21 21
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 18 18
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 23
No Yes Anolis carolinensis 76_2.0 Green anole 18 18
No Yes Xenopus laevis African clawed frog 34 34
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 28 28
No Yes Latimeria chalumnae 76_1 Coelacanth 27 27
No Yes Lepisosteus oculatus 76 Spotted gar 25 25
No Yes Gadus morhua 76_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 27 27
No Yes Takifugu rubripes 76_4 Torafugu 44 44
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 21 21
No Yes Oryzias latipes 76_1 Japanese medaka 27 27
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 19 19
No Yes Poecilia formosa 76 Amazon molly 19 19
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 26 26
No Yes Astyanax mexicanus 76 Mexican tetra 23 23
No Yes Danio rerio 76_9 Zebrafish 33 33
No Yes Oikopleura dioica   4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 76 Vase tunicate 9 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 10 10
No Yes Adineta vaga   17 17
No Yes Octopus bimaculoides 280   13 13
No Yes Crassostrea gigas 22 Pacific oyster 13 13
No Yes Lottia gigantea Owl limpet 8 8
No Yes Helobdella robusta   7 7
No Yes Capitella sp. I   10 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 5 5
No Yes Heliconius melpomene Postman butterfly 6 6
No Yes Bombyx mori Domestic silkworm 5 5
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 6
No Yes Linepithema humile v1.1 Argentine ant 10 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   5 5
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 6
No Yes Lucilia cuprina Australian sheep blowfly 5 5
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   6 6
No Yes Drosophila suzukii   5 4
No Yes Drosophila yakuba 1.3   6 6
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   6 6
No Yes Drosophila melanogaster 76_5 Fruit fly 13 13
No Yes Drosophila erecta 1.3   6 6
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   6 6
No Yes Drosophila mojavensis 1.3   6 6
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 5 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 6
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 6 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 7 7
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   7 7
No Yes Daphnia pulex Common water flea 11 11
No Yes Strigamia maritima 22   9 9
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 5 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 6
No Yes Pristionchus pacificus   11 11
No Yes Meloidogyne incognita Southern root-knot nematode 5 5
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 7
No Yes Caenorhabditis japonica   4 4
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 8 8
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   4 4
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 5 5
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 11 11
No Yes Hydra vulgaris   11 11
No Yes Amphimedon queenslandica   11 11
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   6 6
No Yes Capsaspora owczarzaki ATCC 30864   8 8
No Yes Conidiobolus coronatus NRRL28638 v1.0   7 7
No Yes Mortierella verticillata NRRL 6337   15 15
No Yes Phycomyces blakesleeanus   13 13
No Yes Rhizopus oryzae RA 99-880   12 12
No Yes Mucor circinelloides   12 12
No Yes Rhizomucor miehei CAU432   12 12
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   6 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   4 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   5 5
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   4 4
No Yes Microbotryum violaceum 22   7 7
No Yes Wallemia sebi v1.0   7 7
No Yes Sphaerobolus stellatus v1.0   11 11
No Yes Piloderma croceum F 1598 v1.0   10 10
No Yes Serpula lacrymans var. lacrymans S7.9   4 4
No Yes Coniophora puteana   8 8
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   8 8
No Yes Pisolithus tinctorius Marx 270 v1.0   6 6
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   6 6
No Yes Pleurotus ostreatus Oyster mushroom 6 6
No Yes Amanita thiersii Skay4041 v1.0   5 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 9
No Yes Galerina marginata v1.0   6 6
No Yes Hebeloma cylindrosporum h7 v2.0   8 8
No Yes Laccaria bicolor S238N-H82   9 9
No Yes Agaricus bisporus var. bisporus   6 6
No Yes Schizophyllum commune   5 5
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 6
No Yes Heterobasidion annosum   5 5
No Yes Gloeophyllum trabeumv1.0   6 6
No Yes Punctularia strigosozonata v1.0   10 10
No Yes Sebacina vermifera MAFF 305830 v1.0   6 6
No Yes Fomitiporia mediterranea v1.0   5 5
No Yes Tulasnella calospora AL13/4D v1.0   8 8
No Yes Postia placenta   8 8
No Yes Wolfiporia cocos MD-104 SS10 v1.0   8 8
No Yes Fomitopsis pinicolav1.0   9 9
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 12
No Yes Phanerochaete chrysosporium RP-78 2.1   5 5
No Yes Dichomitus squalens   6 6
No Yes Trametes versicolor v1.0   6 6
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   4 4
No Yes Magnaporthe grisea 70-15   4 4
No Yes Podospora anserina   4 4
No Yes Sporotrichum thermophile ATCC 42464   4 4
No Yes Thielavia terrestris NRRL 8126   4 4
No Yes Chaetomium globosum CBS 148.51   4 4
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   4 4
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 4 4
No Yes Verticillium albo-atrum VaMs.102   3 3
No Yes Verticillium dahliae VdLs.17   4 4
No Yes Acremonium alcalophilumv 1.0   4 4
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   4 4
No Yes Nectria haematococca mpVI   4 4
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   4 4
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   4 4
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   4 4
No Yes Trichoderma virens Gv29-8   4 4
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 4
No Yes Amorphotheca resinae v1.0 Creosote fungus 4 4
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   4 4
No Yes Leptosphaeria maculans 22   4 4
No Yes Setosphaeria turcica v1.0   4 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   4 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 4
No Yes Alternaria brassicicola   4 4
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   4 4
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   4 4
No Yes Mycosphaerella graminicola IPO323   4 4
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   4 4
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 4
No Yes Paracoccidioides brasiliensis Pb18   4 4
No Yes Coccidioides posadasii RMSCC 3488   4 4
No Yes Coccidioides immitis RS   4 4
No Yes Ajellomyces dermatitidis SLH14081   4 4
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   4 4
No Yes Trichophyton verrucosum HKI 0517   4 4
No Yes Arthroderma benhamiae CBS 112371   4 4
No Yes Trichophyton tonsurans CBS 112818   4 4
No Yes Trichophyton rubrum CBS 118892   4 4
No Yes Uncinocarpus reesii 1704   4 4
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 4
No Yes Penicillium chrysogenum v1.0   4 4
No Yes Aspergillus acidus v1.0   4 4
No Yes Aspergillus fumigatus Af293   4 4
No Yes Aspergillus brasiliensis v1.0   4 4
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   4 4
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   4 4
No Yes Aspergillus carbonarius ITEM 5010   4 4
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   4 4
No Yes Aspergillus tubingensis v1.0   4 4
No Yes Aspergillus wentii v1.0   4 4
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   4 4
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   4 4
No Yes Tuber melanosporum Mel28 22   4 4
No Yes Tuber melanosporum Vittad Perigord truffle 4 4
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   3 3
No Yes Pichia membranifaciensv1.0   5 5
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   3 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   3 3
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   3 3
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   3 3
No Yes Candida lusitaniae ATCC 42720   3 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   2 2
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   3 3
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   2 2
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   3 3
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   3 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   15 15
No Yes Spizellomyces punctatus DAOM BR117   11 11
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   5 5
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   42 42
No Yes Pinus taeda Loblolly pine 58 54
No Yes Picea abies Norway spruce 52 51
No Yes Eucalyptus grandis v201 Rose gum 108 108
No Yes Theobroma cacao B97-61/B2 v1 Cacao 65 65
No Yes Gossypium raimondii v221   341 341
No Yes Citrus clementina v165   105 105
No Yes Citrus sinensis v154 Sweet orange 140 140
No Yes Thellungiella halophila v173   92 92
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 143 143
No Yes Capsella rubella v183   94 94
No Yes Arabidopsis lyrata Lyrate rockcress 86 86
No Yes Arabidopsis thaliana 10 Thale cress 118 118
No Yes Carica papaya Papaya 50 50
No Yes Medicago truncatula Barrel medic 134 134
No Yes Phaseolus vulgaris v186 French bean 103 103
No Yes Glycine max v109 Soybean 218 218
No Yes Cucumis sativus v122 Cucumber 121 121
No Yes Fragaria vesca Wild strawberry 69 69
No Yes Malus domestica v196 Apple 142 142
No Yes Prunus persica v139 Peach 74 74
No Yes Linum usitatissimum v200 Flax 115 115
No Yes Manihot esculenta v147 Cassava 123 122
No Yes Populus trichocarpa v156 Black cottonwood 139 139
No Yes Vitis vinifera Wine grape 58 58
No Yes Mimulus guttatus v140 Spotted monkey flower 81 81
No Yes Solanum lycopersicum v.2.3 Tomato 73 72
No Yes Solanum tuberosum Potato 113 113
No Yes Actinidia chinensis Hongyang   152 151
No Yes Aquilegia coerulea v195   102 102
No Yes Triticum urartu 22   59 59
No Yes Triticum aestivum 22 Bread wheat 185 185
No Yes Aegilops tauschii 22   60 59
No Yes Brachypodium distachyon Stiff brome 94 94
No Yes Oryza barthii 22 African wild rice 99 98
No Yes Oryza meridionalis 22   104 98
No Yes Oryza glumaepatula 22   104 104
No Yes Oryza glaberrima African rice 72 72
No Yes Oryza punctata 22   96 96
No Yes Oryza nivara 22   125 124
No Yes Oryza brachyantha 22 Malo sina 69 69
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 133 133
No Yes Oryza sativa v193 Rice 133 133
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 99 98
No Yes Panicum virgatum v202 Switchgrass 145 145
No Yes Setaria italica v164 Foxtail millet 108 108
No Yes Zea mays subsp. mays Maize 164 164
No Yes Zea mays v181 Maize 178 178
No Yes Sorghum bicolor Sorghum 74 73
No Yes Musa balbisiana Balbis banana 131 131
No Yes Musa acuminata 22 Wild Malaysian banana 132 132
No Yes Amborella trichopoda 22   54 54
No Yes Physcomitrella patens   25 25
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   5 4
No Yes Ostreococcus lucimarinus CCE9901   3 2
No Yes Ostreococcus tauri   5 4
No Yes Bathycoccus prasinos   5 4
No Yes Micromonas sp. RCC299   5 5
No Yes Micromonas pusilla CCMP1545 v3.0   7 5
No Yes Porphyridium purpureum 02_2012   4 4
No Yes Thecamonas trahens ATCC 50062   9 9
No Yes Bigelowiella natans CCMP2755 22   14 14
No Yes Cyanophora paradoxa   5 5
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   1 1
No Yes Albugo laibachii 22   35 35
No Yes Pythium iwayamai DAOM BR242034 22   8 8
No Yes Pythium arrhenomanes ATCC 12531 22   5 5
No Yes Pythium ultimum v1.7-2   7 7
No Yes Pythium aphanidermatum DAOM BR444 22   5 5
No Yes Pythium irregulare DAOM BR486 22   7 7
No Yes Pythium vexans DAOM BR484 22   6 6
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   7 7
No Yes Phytophthora capsici   6 6
No Yes Hyaloperonospora arabidopsidis 22   14 14
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   9 9
No Yes Paramecium tetraurelia   18 18
No Yes Tetrahymena thermophila SB210 1   5 5
No Yes Symbiodinium minutum clade B1 v1.2   4 4
No Yes Naegleria gruberi   15 15
No Yes Guillardia theta CCMP2712 v1.0   11 11
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 43 43
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 9 9
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   5 5
No Yes Cryptococcus neoformans JEC21   4 4
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   4 4
No Yes Coccidioides posadasii str. Silveira   4 4
No Yes Coccidioides immitis RMSCC 3703   4 4
No Yes Coccidioides immitis RMSCC 2394   4 4
No Yes Coccidioides immitis H538.4   4 4
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   4 4
No Yes Aspergillus fumigatus A1163   4 4
No Yes Candida albicans WO-1   3 3
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   2 2
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   8 8
No Yes Batrachochytrium dendrobatidis JAM81   6 6
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 65 64
No Yes Hordeum vulgare 22 Domesticated barley 164 164
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 82 82
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 73 73
No Yes Homo sapiens (NCBI version) Human 35 35
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 19 19
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 8 8
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   5 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 6 6
No Yes Lotus japonicus (Early assembly)   58 58
No Yes Malus x domestica (Duplicate) Apple 142 142
No Yes Ricinus communis (Early assembly) Castor bean 58 58
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   149 146
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 69 68
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 73 72
No Yes Phoenix dactylifera (Early draft) Date palm 43 43
No Yes Homo sapiens 69_37 Human 19 19
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 16
No Yes Gorilla gorilla 69_3.1 Western gorilla 16 16
No Yes Pongo abelii 69_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 18 18
No Yes Macaca mulatta 69_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 21 21
No Yes Otolemur garnettii 69_3 Small-eared galago 20 20
No Yes Microcebus murinus 69_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 69_3.4 Norway rat 22 22
No Yes Mus musculus 69_38 House mouse 20 20
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 16 16
No Yes Cavia porcellus 69_3 Domestic guinea pig 19 19
No Yes Oryctolagus cuniculus 69_2 Rabbit 15 15
No Yes Ochotona princeps 69 American pika 13 13
No Yes Tupaia belangeri 69 Northern tree shrew 12 12
No Yes Sus scrofa 69_10.2 Pig 19 19
No Yes Bos taurus 69_3.1 Cattle 21 21
No Yes Vicugna pacos 69_1 Alpaca 12 12
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 69_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 69_1 Giant panda 20 20
No Yes Canis familiaris 69_3.1 Dog 19 19
No Yes Felis catus 69 Domestic cat 15 15
No Yes Equus caballus 69_2 Horse 19 19
No Yes Myotis lucifugus 69_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 69_1 Large flying fox 16 16
No Yes Sorex araneus 69_1 European shrew 9 9
No Yes Erinaceus europaeus 69 Western European hedgehog 12 12
No Yes Procavia capensis 69_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 69_3 African savanna elephant 18 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 12 12
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 17 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 17 17
No Yes Gallus gallus 69_2 Chicken 17 17
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 20 20
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 18 18
No Yes Anolis carolinensis 69_2.0 Green anole 16 16
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 21 21
No Yes Latimeria chalumnae 69_1 Coelacanth 19 19
No Yes Gadus morhua 69_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 20 20
No Yes Takifugu rubripes 69_4 Torafugu 17 17
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 18 18
No Yes Oryzias latipes 69_1 Japanese medaka 20 20
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 19 19
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 22 22
No Yes Danio rerio 69_9 Zebrafish 24 24
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 7 7
No Yes Ciona intestinalis 69 Vase tunicate 8 8
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 85 85
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21163 21134
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   11 11
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1465 1463
No Yes Uniprot 2018_03 genome   21109 21065
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   23 23
No Yes Protein Data Bank (all PDB sequenc)   144 144
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   263 263
No Yes TargetDB (Targets)   71 71
No Yes UniProt viral sequences (Viral)   5 5

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