SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


CAD & PB1 domains superfamily domain assignments
in
Malus domestica v196

Assignment details

(show help)


Malus domestica v196 has 142 significant domains in 142 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000090281|PACid:22655489   3.09e-20   203-307   PB1 domain  
MDP0000121055|PACid:22666246   4.91e-23   58-158   PB1 domain  
MDP0000123466|PACid:22652651   0.0000000932   607-679   PB1 domain  
MDP0000123816|PACid:22649285   0.000000000000726   89-169   PB1 domain  
MDP0000124810|PACid:22642493   4.12e-20   223-322   PB1 domain  
MDP0000128251|PACid:22663119   0.0000000000118   40-130   PB1 domain  
MDP0000128688|PACid:22677243   0.0000000000131   297-385   PB1 domain  
MDP0000130583|PACid:22674907   0.0000000000000432   163-267   PB1 domain  
MDP0000131759|PACid:22676307   0.000000000000853   266-357   PB1 domain  
MDP0000132805|PACid:22633905   4.71e-18   162-262   PB1 domain  
MDP0000132856|PACid:22651477   1.01e-21   881-975   PB1 domain  
MDP0000133428|PACid:22668579   2.39e-18   27-119   PB1 domain  
MDP0000134824|PACid:22673229   0.00000108   1034-1099   PB1 domain  
MDP0000137461|PACid:22648400   0.000000373   347-424   PB1 domain  
MDP0000139073|PACid:22644421   0.000000000000186   615-689   PB1 domain  
MDP0000143621|PACid:22628211   0.00000235   138-183   PB1 domain  
MDP0000143749|PACid:22644960   0.00000000405   775-861   PB1 domain  
MDP0000144474|PACid:22681197   1.69e-21   71-169   PB1 domain  
MDP0000146848|PACid:22646274   0.0000275   75-151   PB1 domain  
MDP0000147195|PACid:22649579   4.56e-18   203-290   PB1 domain  
MDP0000149863|PACid:22628703   5.89e-16   402-490   PB1 domain  
MDP0000149895|PACid:22660585   0.000000000216   113-172   PB1 domain  
MDP0000151877|PACid:22677430   0.00000000000052   123-202   PB1 domain  
MDP0000153538|PACid:22660264   0.0000000338   745-826   PB1 domain  
MDP0000157035|PACid:22653079   0.00000000000000589   150-236   PB1 domain  
MDP0000160250|PACid:22626588   5.56e-21   27-107   PB1 domain  
MDP0000160327|PACid:22626674   2.16e-23   68-160   PB1 domain  
MDP0000163441|PACid:22679665   2.08e-20   197-286   PB1 domain  
MDP0000164095|PACid:22633368   0.0000000000000184   185-289   PB1 domain  
MDP0000165129|PACid:22666718   0.00000471   21-55   PB1 domain  
MDP0000166302|PACid:22668611   6.28e-20   25-115   PB1 domain  
MDP0000166305|PACid:22668609   0.0000000154   1191-1249   PB1 domain  
MDP0000173178|PACid:22664269   0.00000000000245   367-434   PB1 domain  
MDP0000174664|PACid:22682526   1.57e-20   183-285   PB1 domain  
MDP0000176753|PACid:22638349   2.01e-21   84-162   PB1 domain  
MDP0000184936|PACid:22668269   0.00000000000654   63-117   PB1 domain  
MDP0000185253|PACid:22621202   0.00000049   1014-1079   PB1 domain  
MDP0000186724|PACid:22639252   9.57e-18   274-367   PB1 domain  
MDP0000186964|PACid:22623999   1.57e-18   25-116   PB1 domain  
MDP0000186967|PACid:22623998   0.00000000000841   16-93   PB1 domain  
MDP0000189383|PACid:22627831   0.00000000000245   367-434   PB1 domain  
MDP0000190965|PACid:22646243   4.49e-16   273-345   PB1 domain  
MDP0000191358|PACid:22662516   5.89e-22   565-659   PB1 domain  
MDP0000194603|PACid:22651584   0.000000000235   582-663   PB1 domain  
MDP0000195460|PACid:22668691   0.00000000000051   159-234   PB1 domain  
MDP0000196280|PACid:22638037   1.61e-18   203-290   PB1 domain  
MDP0000198976|PACid:22642289   0.0000000000137   122-212   PB1 domain  
MDP0000208345|PACid:22625014   9.42e-21   141-231   PB1 domain  
MDP0000211459|PACid:22629500   0.00000000334   775-862   PB1 domain  
MDP0000211848|PACid:22677693   6.38e-18   199-245,302-338   PB1 domain  
MDP0000211934|PACid:22646074   0.0000000000000144   105-194   PB1 domain  
MDP0000213864|PACid:22664520   1.28e-19   202-301   PB1 domain  
MDP0000215190|PACid:22682613   2.16e-18   202-289   PB1 domain  
MDP0000221147|PACid:22644215   1.23e-18   401-491   PB1 domain  
MDP0000222723|PACid:22630715   1.52e-21   198-289   PB1 domain  
MDP0000223496|PACid:22663499   0.0000000000000579   88-172   PB1 domain  
MDP0000225980|PACid:22683343   0.00000000654   670-750   PB1 domain  
MDP0000232417|PACid:22660261   0.00000054   762-837   PB1 domain  
MDP0000237499|PACid:22623494   2.09e-23   19-124   PB1 domain  
MDP0000239938|PACid:22673593   2.55e-21   878-965   PB1 domain  
MDP0000240766|PACid:22630500   1.47e-24   72-164   PB1 domain  
MDP0000242830|PACid:22667881   0.000000000235   175-237   PB1 domain  
MDP0000245842|PACid:22631574   0.00000000000216   6-78   PB1 domain  
MDP0000246042|PACid:22662330   0.00000000000432   97-184   PB1 domain  
MDP0000246204|PACid:22651937   7.85e-16   176-269   PB1 domain  
MDP0000246881|PACid:22667607   2.68e-21   839-926   PB1 domain  
MDP0000250876|PACid:22646553   0.000000000000085   174-261   PB1 domain  
MDP0000251020|PACid:22679656   0.000000000000373   88-186   PB1 domain  
MDP0000253285|PACid:22668619   1.28e-20   89-186   PB1 domain  
MDP0000254639|PACid:22633441   0.0000000000131   9-71   PB1 domain  
MDP0000255223|PACid:22675170   0.00000000000000363   49-152   PB1 domain  
MDP0000258032|PACid:22620805   0.0000000000456   721-799   PB1 domain  
MDP0000259062|PACid:22632961   0.0000000000000638   679-762   PB1 domain  
MDP0000262602|PACid:22656166   2.68e-19   318-421   PB1 domain  
MDP0000265619|PACid:22624952   1.37e-19   1606-1692   PB1 domain  
MDP0000267601|PACid:22629055   0.0000000000000589   720-814   PB1 domain  
MDP0000268306|PACid:22630740   0.00000128   761-835   PB1 domain  
MDP0000270789|PACid:22636213   0.00000000000000137   190-282   PB1 domain  
MDP0000271128|PACid:22668857   0.0000471   9-41   PB1 domain  
MDP0000271528|PACid:22669796   0.000000000000628   567-630   PB1 domain  
MDP0000271642|PACid:22638050   5.05e-20   279-365   PB1 domain  
MDP0000272269|PACid:22639365   4.61e-21   129-219   PB1 domain  
MDP0000277775|PACid:22651656   0.00000000353   742-824   PB1 domain  
MDP0000280081|PACid:22625200   5.1e-19   104-191   PB1 domain  
MDP0000284256|PACid:22666363   8.83e-16   20-96   PB1 domain  
MDP0000284467|PACid:22651022   0.0000000000000476   73-158   PB1 domain  
MDP0000284492|PACid:22651059   2.16e-18   202-289   PB1 domain  
MDP0000284546|PACid:22635305   8.24e-22   57-155   PB1 domain  
MDP0000287577|PACid:22673552   0.00000000000647   131-173   PB1 domain  
MDP0000288970|PACid:22628929   9.81e-22   190-279   PB1 domain  
MDP0000289720|PACid:22646336   1.31e-19   191-281   PB1 domain  
MDP0000291938|PACid:22650718   2.6e-21   54-152   PB1 domain  
MDP0000293351|PACid:22637531   0.0000000000000785   441-523   PB1 domain  
MDP0000294904|PACid:22624907   0.0000000000471   37-124   PB1 domain  
MDP0000295589|PACid:22626226   2.35e-20   89-184   PB1 domain  
MDP0000296324|PACid:22643492   3.53e-22   75-166   PB1 domain  
MDP0000297044|PACid:22645000   0.0000000000000392   516-587   PB1 domain  
MDP0000298437|PACid:22631913   0.000000353   29-75   PB1 domain  
MDP0000299828|PACid:22650603   5.05e-23   58-158   PB1 domain  
MDP0000300496|PACid:22651982   0.000000638   263-326   PB1 domain  
MDP0000303142|PACid:22673173   3.63e-21   90-179   PB1 domain  
MDP0000304762|PACid:22660319   0.00000589   119-158   PB1 domain  
MDP0000304911|PACid:22676730   1.11e-22   30-114   PB1 domain  
MDP0000310875|PACid:22641004   0.0000000000736   721-799   PB1 domain  
MDP0000319869|PACid:22662416   2.45e-22   226-314   PB1 domain  
MDP0000319957|PACid:22645199   0.00000137   843-919   PB1 domain  
MDP0000324398|PACid:22661813   1.67e-21   138-219   PB1 domain  
MDP0000361838|PACid:22625817   4.22e-16   2-88   PB1 domain  
MDP0000396750|PACid:22637937   0.0000000000000687   115-197   PB1 domain  
MDP0000400262|PACid:22634298   3.11e-24   49-144   PB1 domain  
MDP0000412781|PACid:22651617   0.000000000422   692-775   PB1 domain  
MDP0000422473|PACid:22654365   0.00000000000925   6-78   PB1 domain  
MDP0000456476|PACid:22682651   0.0000000000000118   240-331   PB1 domain  
MDP0000485205|PACid:22635561   0.00000000142   258-324   PB1 domain  
MDP0000490443|PACid:22651496   1.05e-21   245-335   PB1 domain  
MDP0000516949|PACid:22648612   2.94e-20   241-332   PB1 domain  
MDP0000543718|PACid:22640996   0.00000000000000981   152-238   PB1 domain  
MDP0000550049|PACid:22646916   0.0000327   592-663   PB1 domain  
MDP0000564492|PACid:22631387   0.0000000239   3-65   PB1 domain  
MDP0000580010|PACid:22683132   4.07e-22   250-354   PB1 domain  
MDP0000584547|PACid:22660637   1.08e-18   860-927   PB1 domain  
MDP0000626273|PACid:22624794   6.67e-22   57-155   PB1 domain  
MDP0000630746|PACid:22629362   1.5e-21   116-214   PB1 domain  
MDP0000634433|PACid:22656860   0.0000000118   3-70   PB1 domain  
MDP0000636979|PACid:22680882   6.18e-20   366-455   PB1 domain  
MDP0000668354|PACid:22624855   8.34e-23   59-150   PB1 domain  
MDP0000708609|PACid:22657565   0.00000126   60-88   PB1 domain  
MDP0000736451|PACid:22669067   6.67e-22   57-155   PB1 domain  
MDP0000741079|PACid:22656243   4.25e-23   360-450   PB1 domain  
MDP0000753736|PACid:22676642   0.000000000353   345-441   PB1 domain  
MDP0000774395|PACid:22673873   9.81e-25   43-131   PB1 domain  
MDP0000778486|PACid:22625568   7.01e-21   197-283   PB1 domain  
MDP0000801571|PACid:22651652   0.00000608   18-64   PB1 domain  
MDP0000871625|PACid:22634791   5.61e-18   275-366   PB1 domain  
MDP0000876321|PACid:22663258   0.0000000137   1035-1100   PB1 domain  
MDP0000886637|PACid:22641953   0.0000000133   1039-1115   PB1 domain  
MDP0000902506|PACid:22629889   9.81e-25   43-131   PB1 domain  
MDP0000923528|PACid:22658358   7.85e-23   30-115   PB1 domain  
MDP0000929655|PACid:22661337   0.00000000338   498-564   PB1 domain  
MDP0000932593|PACid:22679009   2.29e-21   30-113   PB1 domain  
MDP0000936776|PACid:22657461   4.46e-23   59-150   PB1 domain  
MDP0000945260|PACid:22668416   4.19e-20   94-185   PB1 domain  
 
Weak hits:
MDP0000144260|PACid:22632134   0.00981   3-80   PB1 domain  
MDP0000239826|PACid:22657863   0.000785   2-69   PB1 domain  
MDP0000254826|PACid:22683044   0.0275   8-70   PB1 domain  
MDP0000276683|PACid:22633450   0.00235   209-248   PB1 domain  
MDP0000305002|PACid:22629291   0.00108   216-266   PB1 domain  
MDP0000324919|PACid:22659696   0.000275   150-195   PB1 domain  
MDP0000788505|PACid:22637096   0.000785   772-804   PB1 domain  
MDP0000840525|PACid:22644611   0.00157   441-524   PB1 domain  
  0.00265   308-400   PB1 domain  
MDP0000870881|PACid:22666996   0.000184   68-115   PB1 domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a CAD & PB1 domains domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   60222 60222
No Yes Homo sapiens 76_38 Human 75 75
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 21
No Yes Pongo abelii 76_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 22
No Yes Papio anubis 76 Olive baboon 21 21
No Yes Macaca mulatta 76_1 Rhesus monkey 27 27
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 33 33
No Yes Otolemur garnettii 76_3 Small-eared galago 20 20
No Yes Microcebus murinus 76_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 76_5.0 Norway rat 21 21
No Yes Mus musculus 76_38 House mouse 43 43
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 18 18
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 32 32
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 21
No Yes Oryctolagus cuniculus 76_2 Rabbit 17 17
No Yes Ochotona princeps 76 American pika 13 13
No Yes Tupaia belangeri 76 Northern tree shrew 12 12
No Yes Sus scrofa 76_10.2 Pig 24 24
No Yes Bos taurus 76_3.1 Cattle 22 22
No Yes Ovis aries 76_3.1 Sheep 20 20
No Yes Vicugna pacos 76_1 Alpaca 12 12
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 76_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 76_1 Giant panda 23 23
No Yes Canis familiaris 76_3.1 Dog 22 22
No Yes Felis catus 76_6.2 Domestic cat 21 21
No Yes Equus caballus 76_2 Horse 20 20
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 76_1 Large flying fox 16 16
No Yes Sorex araneus 76_1 European shrew 9 9
No Yes Erinaceus europaeus 76 Western European hedgehog 12 12
No Yes Procavia capensis 76_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 76_3 African savanna elephant 22 22
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 25 24
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 21 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 76_5 Platypus 18 18
No Yes Saccoglossus kowalevskii v3.0   38 38
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 21 21
No Yes Gallus gallus 76_4 Chicken 19 19
No Yes Anas platyrhynchos 76_1.0 Mallard 19 19
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 21 21
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 18 18
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 23
No Yes Anolis carolinensis 76_2.0 Green anole 18 18
No Yes Xenopus laevis African clawed frog 34 34
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 28 28
No Yes Latimeria chalumnae 76_1 Coelacanth 27 27
No Yes Lepisosteus oculatus 76 Spotted gar 25 25
No Yes Gadus morhua 76_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 27 27
No Yes Takifugu rubripes 76_4 Torafugu 44 44
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 21 21
No Yes Oryzias latipes 76_1 Japanese medaka 27 27
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 19 19
No Yes Poecilia formosa 76 Amazon molly 19 19
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 26 26
No Yes Astyanax mexicanus 76 Mexican tetra 23 23
No Yes Danio rerio 76_9 Zebrafish 33 33
No Yes Oikopleura dioica   4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 76 Vase tunicate 9 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 10 10
No Yes Adineta vaga   17 17
No Yes Octopus bimaculoides 280   13 13
No Yes Crassostrea gigas 22 Pacific oyster 13 13
No Yes Lottia gigantea Owl limpet 8 8
No Yes Helobdella robusta   7 7
No Yes Capitella sp. I   10 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 5 5
No Yes Heliconius melpomene Postman butterfly 6 6
No Yes Bombyx mori Domestic silkworm 5 5
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 6
No Yes Linepithema humile v1.1 Argentine ant 10 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   5 5
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 6
No Yes Lucilia cuprina Australian sheep blowfly 5 5
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   6 6
No Yes Drosophila suzukii   5 4
No Yes Drosophila yakuba 1.3   6 6
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   6 6
No Yes Drosophila melanogaster 76_5 Fruit fly 13 13
No Yes Drosophila erecta 1.3   6 6
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   6 6
No Yes Drosophila mojavensis 1.3   6 6
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 5 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 6
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 6 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 7 7
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   7 7
No Yes Daphnia pulex Common water flea 11 11
No Yes Strigamia maritima 22   9 9
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 5 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 6
No Yes Pristionchus pacificus   11 11
No Yes Meloidogyne incognita Southern root-knot nematode 5 5
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 7
No Yes Caenorhabditis japonica   4 4
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 8 8
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   4 4
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 5 5
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 11 11
No Yes Hydra vulgaris   11 11
No Yes Amphimedon queenslandica   11 11
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   6 6
No Yes Capsaspora owczarzaki ATCC 30864   8 8
No Yes Conidiobolus coronatus NRRL28638 v1.0   7 7
No Yes Mortierella verticillata NRRL 6337   15 15
No Yes Phycomyces blakesleeanus   13 13
No Yes Rhizopus oryzae RA 99-880   12 12
No Yes Mucor circinelloides   12 12
No Yes Rhizomucor miehei CAU432   12 12
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   6 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   4 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   5 5
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   4 4
No Yes Microbotryum violaceum 22   7 7
No Yes Wallemia sebi v1.0   7 7
No Yes Sphaerobolus stellatus v1.0   11 11
No Yes Piloderma croceum F 1598 v1.0   10 10
No Yes Serpula lacrymans var. lacrymans S7.9   4 4
No Yes Coniophora puteana   8 8
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   8 8
No Yes Pisolithus tinctorius Marx 270 v1.0   6 6
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   6 6
No Yes Pleurotus ostreatus Oyster mushroom 6 6
No Yes Amanita thiersii Skay4041 v1.0   5 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 9
No Yes Galerina marginata v1.0   6 6
No Yes Hebeloma cylindrosporum h7 v2.0   8 8
No Yes Laccaria bicolor S238N-H82   9 9
No Yes Agaricus bisporus var. bisporus   6 6
No Yes Schizophyllum commune   5 5
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 6
No Yes Heterobasidion annosum   5 5
No Yes Gloeophyllum trabeumv1.0   6 6
No Yes Punctularia strigosozonata v1.0   10 10
No Yes Sebacina vermifera MAFF 305830 v1.0   6 6
No Yes Fomitiporia mediterranea v1.0   5 5
No Yes Tulasnella calospora AL13/4D v1.0   8 8
No Yes Postia placenta   8 8
No Yes Wolfiporia cocos MD-104 SS10 v1.0   8 8
No Yes Fomitopsis pinicolav1.0   9 9
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 12
No Yes Phanerochaete chrysosporium RP-78 2.1   5 5
No Yes Dichomitus squalens   6 6
No Yes Trametes versicolor v1.0   6 6
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   4 4
No Yes Magnaporthe grisea 70-15   4 4
No Yes Podospora anserina   4 4
No Yes Sporotrichum thermophile ATCC 42464   4 4
No Yes Thielavia terrestris NRRL 8126   4 4
No Yes Chaetomium globosum CBS 148.51   4 4
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   4 4
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 4 4
No Yes Verticillium albo-atrum VaMs.102   3 3
No Yes Verticillium dahliae VdLs.17   4 4
No Yes Acremonium alcalophilumv 1.0   4 4
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   4 4
No Yes Nectria haematococca mpVI   4 4
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   4 4
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   4 4
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   4 4
No Yes Trichoderma virens Gv29-8   4 4
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 4
No Yes Amorphotheca resinae v1.0 Creosote fungus 4 4
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   4 4
No Yes Leptosphaeria maculans 22   4 4
No Yes Setosphaeria turcica v1.0   4 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   4 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 4
No Yes Alternaria brassicicola   4 4
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   4 4
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   4 4
No Yes Mycosphaerella graminicola IPO323   4 4
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   4 4
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 4
No Yes Paracoccidioides brasiliensis Pb18   4 4
No Yes Coccidioides posadasii RMSCC 3488   4 4
No Yes Coccidioides immitis RS   4 4
No Yes Ajellomyces dermatitidis SLH14081   4 4
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   4 4
No Yes Trichophyton verrucosum HKI 0517   4 4
No Yes Arthroderma benhamiae CBS 112371   4 4
No Yes Trichophyton tonsurans CBS 112818   4 4
No Yes Trichophyton rubrum CBS 118892   4 4
No Yes Uncinocarpus reesii 1704   4 4
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 4
No Yes Penicillium chrysogenum v1.0   4 4
No Yes Aspergillus acidus v1.0   4 4
No Yes Aspergillus fumigatus Af293   4 4
No Yes Aspergillus brasiliensis v1.0   4 4
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   4 4
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   4 4
No Yes Aspergillus carbonarius ITEM 5010   4 4
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   4 4
No Yes Aspergillus tubingensis v1.0   4 4
No Yes Aspergillus wentii v1.0   4 4
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   4 4
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   4 4
No Yes Tuber melanosporum Mel28 22   4 4
No Yes Tuber melanosporum Vittad Perigord truffle 4 4
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   3 3
No Yes Pichia membranifaciensv1.0   5 5
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   3 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   3 3
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   3 3
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   3 3
No Yes Candida lusitaniae ATCC 42720   3 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   2 2
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   3 3
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   2 2
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   3 3
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   3 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   15 15
No Yes Spizellomyces punctatus DAOM BR117   11 11
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   5 5
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   42 42
No Yes Pinus taeda Loblolly pine 58 54
No Yes Picea abies Norway spruce 52 51
No Yes Eucalyptus grandis v201 Rose gum 108 108
No Yes Theobroma cacao B97-61/B2 v1 Cacao 65 65
No Yes Gossypium raimondii v221   341 341
No Yes Citrus clementina v165   105 105
No Yes Citrus sinensis v154 Sweet orange 140 140
No Yes Thellungiella halophila v173   92 92
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 143 143
No Yes Capsella rubella v183   94 94
No Yes Arabidopsis lyrata Lyrate rockcress 86 86
No Yes Arabidopsis thaliana 10 Thale cress 118 118
No Yes Carica papaya Papaya 50 50
No Yes Medicago truncatula Barrel medic 134 134
No Yes Phaseolus vulgaris v186 French bean 103 103
No Yes Glycine max v109 Soybean 218 218
No Yes Cucumis sativus v122 Cucumber 121 121
No Yes Fragaria vesca Wild strawberry 69 69
No Yes Malus domestica v196 Apple 142 142
No Yes Prunus persica v139 Peach 74 74
No Yes Linum usitatissimum v200 Flax 115 115
No Yes Manihot esculenta v147 Cassava 123 122
No Yes Populus trichocarpa v156 Black cottonwood 139 139
No Yes Vitis vinifera Wine grape 58 58
No Yes Mimulus guttatus v140 Spotted monkey flower 81 81
No Yes Solanum lycopersicum v.2.3 Tomato 73 72
No Yes Solanum tuberosum Potato 113 113
No Yes Actinidia chinensis Hongyang   152 151
No Yes Aquilegia coerulea v195   102 102
No Yes Triticum urartu 22   59 59
No Yes Triticum aestivum 22 Bread wheat 185 185
No Yes Aegilops tauschii 22   60 59
No Yes Brachypodium distachyon Stiff brome 94 94
No Yes Oryza barthii 22 African wild rice 99 98
No Yes Oryza meridionalis 22   104 98
No Yes Oryza glumaepatula 22   104 104
No Yes Oryza glaberrima African rice 72 72
No Yes Oryza punctata 22   96 96
No Yes Oryza nivara 22   125 124
No Yes Oryza brachyantha 22 Malo sina 69 69
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 133 133
No Yes Oryza sativa v193 Rice 133 133
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 99 98
No Yes Panicum virgatum v202 Switchgrass 145 145
No Yes Setaria italica v164 Foxtail millet 108 108
No Yes Zea mays subsp. mays Maize 164 164
No Yes Zea mays v181 Maize 178 178
No Yes Sorghum bicolor Sorghum 74 73
No Yes Musa balbisiana Balbis banana 131 131
No Yes Musa acuminata 22 Wild Malaysian banana 132 132
No Yes Amborella trichopoda 22   54 54
No Yes Physcomitrella patens   25 25
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   5 4
No Yes Ostreococcus lucimarinus CCE9901   3 2
No Yes Ostreococcus tauri   5 4
No Yes Bathycoccus prasinos   5 4
No Yes Micromonas sp. RCC299   5 5
No Yes Micromonas pusilla CCMP1545 v3.0   7 5
No Yes Porphyridium purpureum 02_2012   4 4
No Yes Thecamonas trahens ATCC 50062   9 9
No Yes Bigelowiella natans CCMP2755 22   14 14
No Yes Cyanophora paradoxa   5 5
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   1 1
No Yes Albugo laibachii 22   35 35
No Yes Pythium iwayamai DAOM BR242034 22   8 8
No Yes Pythium arrhenomanes ATCC 12531 22   5 5
No Yes Pythium ultimum v1.7-2   7 7
No Yes Pythium aphanidermatum DAOM BR444 22   5 5
No Yes Pythium irregulare DAOM BR486 22   7 7
No Yes Pythium vexans DAOM BR484 22   6 6
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   7 7
No Yes Phytophthora capsici   6 6
No Yes Hyaloperonospora arabidopsidis 22   14 14
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   9 9
No Yes Paramecium tetraurelia   18 18
No Yes Tetrahymena thermophila SB210 1   5 5
No Yes Symbiodinium minutum clade B1 v1.2   4 4
No Yes Naegleria gruberi   15 15
No Yes Guillardia theta CCMP2712 v1.0   11 11
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 43 43
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 9 9
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   5 5
No Yes Cryptococcus neoformans JEC21   4 4
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   4 4
No Yes Coccidioides posadasii str. Silveira   4 4
No Yes Coccidioides immitis RMSCC 3703   4 4
No Yes Coccidioides immitis RMSCC 2394   4 4
No Yes Coccidioides immitis H538.4   4 4
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   4 4
No Yes Aspergillus fumigatus A1163   4 4
No Yes Candida albicans WO-1   3 3
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   2 2
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   8 8
No Yes Batrachochytrium dendrobatidis JAM81   6 6
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 65 64
No Yes Hordeum vulgare 22 Domesticated barley 164 164
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 82 82
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 73 73
No Yes Homo sapiens (NCBI version) Human 35 35
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 19 19
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 8 8
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   5 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 6 6
No Yes Lotus japonicus (Early assembly)   58 58
No Yes Malus x domestica (Duplicate) Apple 142 142
No Yes Ricinus communis (Early assembly) Castor bean 58 58
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   149 146
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 69 68
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 73 72
No Yes Phoenix dactylifera (Early draft) Date palm 43 43
No Yes Homo sapiens 69_37 Human 19 19
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 16
No Yes Gorilla gorilla 69_3.1 Western gorilla 16 16
No Yes Pongo abelii 69_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 18 18
No Yes Macaca mulatta 69_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 21 21
No Yes Otolemur garnettii 69_3 Small-eared galago 20 20
No Yes Microcebus murinus 69_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 69_3.4 Norway rat 22 22
No Yes Mus musculus 69_38 House mouse 20 20
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 16 16
No Yes Cavia porcellus 69_3 Domestic guinea pig 19 19
No Yes Oryctolagus cuniculus 69_2 Rabbit 15 15
No Yes Ochotona princeps 69 American pika 13 13
No Yes Tupaia belangeri 69 Northern tree shrew 12 12
No Yes Sus scrofa 69_10.2 Pig 19 19
No Yes Bos taurus 69_3.1 Cattle 21 21
No Yes Vicugna pacos 69_1 Alpaca 12 12
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 69_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 69_1 Giant panda 20 20
No Yes Canis familiaris 69_3.1 Dog 19 19
No Yes Felis catus 69 Domestic cat 15 15
No Yes Equus caballus 69_2 Horse 19 19
No Yes Myotis lucifugus 69_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 69_1 Large flying fox 16 16
No Yes Sorex araneus 69_1 European shrew 9 9
No Yes Erinaceus europaeus 69 Western European hedgehog 12 12
No Yes Procavia capensis 69_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 69_3 African savanna elephant 18 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 12 12
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 17 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 17 17
No Yes Gallus gallus 69_2 Chicken 17 17
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 20 20
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 18 18
No Yes Anolis carolinensis 69_2.0 Green anole 16 16
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 21 21
No Yes Latimeria chalumnae 69_1 Coelacanth 19 19
No Yes Gadus morhua 69_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 20 20
No Yes Takifugu rubripes 69_4 Torafugu 17 17
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 18 18
No Yes Oryzias latipes 69_1 Japanese medaka 20 20
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 19 19
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 22 22
No Yes Danio rerio 69_9 Zebrafish 24 24
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 7 7
No Yes Ciona intestinalis 69 Vase tunicate 8 8
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 85 85
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21163 21134
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   11 11
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1465 1463
No Yes Uniprot 2018_03 genome   21109 21065
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   23 23
No Yes Protein Data Bank (all PDB sequenc)   144 144
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   263 263
No Yes TargetDB (Targets)   71 71
No Yes UniProt viral sequences (Viral)   5 5

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]