SUPERFAMILY 1.75 HMM library and genome assignments server

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CAD & PB1 domains superfamily domain assignments
in
Glycine max v109

Assignment details

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Glycine max v109 has 218 significant domains in 218 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma01g00510.1|PACid:16242917   0.00000785   917-982   PB1 domain  
Glyma01g02350.1|PACid:16243144   2.5e-19   237-340   PB1 domain  
Glyma01g02350.2|PACid:16243145   2.5e-19   237-340   PB1 domain  
Glyma01g02350.3|PACid:16243146   2.5e-19   237-340   PB1 domain  
Glyma01g03150.1|PACid:16243231   3.92e-23   32-118   PB1 domain  
Glyma01g03150.2|PACid:16243232   3.92e-23   32-118   PB1 domain  
Glyma01g24100.1|PACid:16244353   2.6e-20   195-296   PB1 domain  
Glyma01g25270.1|PACid:16244438   0.00000000000196   533-607   PB1 domain  
Glyma01g25270.2|PACid:16244439   0.00000000000196   533-607   PB1 domain  
Glyma02g00260.1|PACid:16246474   8.44e-21   145-237   PB1 domain  
Glyma02g01010.1|PACid:16246556   5.89e-16   85-174   PB1 domain  
Glyma02g04420.1|PACid:16246955   7.85e-23   32-117   PB1 domain  
Glyma02g16080.1|PACid:16248241   0.0000051   124-170   PB1 domain  
Glyma02g16090.1|PACid:16248242   4.12e-22   102-192   PB1 domain  
Glyma02g16090.2|PACid:16248243   0.00000745   102-148   PB1 domain  
Glyma02g38200.1|PACid:16249431   7.19e-19   52-146   PB1 domain  
Glyma02g38260.1|PACid:16249442   3.29e-21   244-347   PB1 domain  
Glyma02g38260.2|PACid:16249443   0.0001   244-287   PB1 domain  
Glyma02g38260.3|PACid:16249444   3.29e-21   244-347   PB1 domain  
Glyma02g38260.4|PACid:16249445   3.29e-21   244-347   PB1 domain  
Glyma02g40650.1|PACid:16249707   0.000000638   719-795   PB1 domain  
Glyma02g40650.2|PACid:16249708   0.000024   719-789   PB1 domain  
Glyma02g45100.1|PACid:16250234   0.000000085   752-836   PB1 domain  
Glyma02g48080.1|PACid:16250587   9.48e-22   596-690   PB1 domain  
Glyma03g17450.1|PACid:16251876   0.00000000000105   582-656   PB1 domain  
Glyma03g31520.1|PACid:16252961   1.08e-19   108-194   PB1 domain  
Glyma03g31530.1|PACid:16252962   5.59e-23   124-233   PB1 domain  
Glyma03g32450.1|PACid:16253068   0.00000000000137   113-209   PB1 domain  
Glyma03g36710.1|PACid:16253571   0.0000922   457-529   PB1 domain  
Glyma03g38370.1|PACid:16253760   3.78e-16   83-172   PB1 domain  
Glyma03g40760.1|PACid:16254051   3.14e-21   116-224   PB1 domain  
Glyma03g41920.1|PACid:16254194   0.0000000000032   469-554   PB1 domain  
Glyma04g00210.1|PACid:16254309   2.44e-23   636-731   PB1 domain  
Glyma04g01910.1|PACid:16254532   1.01e-23   767-852   PB1 domain  
Glyma04g04950.1|PACid:16254894   0.00000000628   73-155   PB1 domain  
Glyma04g06890.1|PACid:16255119   0.00000000000036   263-351   PB1 domain  
Glyma04g07040.1|PACid:16255135   0.00000053   133-216   PB1 domain  
Glyma04g09550.1|PACid:16255429   1.37e-21   240-341   PB1 domain  
Glyma04g36160.1|PACid:16256908   5.56e-22   25-114   PB1 domain  
Glyma04g37370.1|PACid:16257037   4.21e-17   389-480   PB1 domain  
Glyma04g37760.1|PACid:16257086   0.00000000054   716-790   PB1 domain  
Glyma04g38480.1|PACid:16257167   1.01e-16   379-474   PB1 domain  
Glyma05g27580.1|PACid:16259834   0.00000144   711-791   PB1 domain  
Glyma05g32930.1|PACid:16260478   1.57e-17   392-490   PB1 domain  
Glyma05g35640.1|PACid:16260814   1.47e-22   163-268   PB1 domain  
Glyma05g36430.1|PACid:16260906   0.0000054   1000-1065   PB1 domain  
Glyma05g38140.1|PACid:16261112   2.8e-17   404-501   PB1 domain  
Glyma05g38540.1|PACid:16261168   0.000000000128   736-811   PB1 domain  
Glyma05g38540.2|PACid:16261169   0.000000000128   736-811   PB1 domain  
Glyma05g38540.3|PACid:16261170   0.000000108   736-802   PB1 domain  
Glyma06g00240.1|PACid:16261189   1.77e-21   572-668   PB1 domain  
Glyma06g02030.1|PACid:16261409   7.11e-22   788-873   PB1 domain  
Glyma06g07130.1|PACid:16262018   0.000000235   133-217   PB1 domain  
Glyma06g09650.1|PACid:16262335   3.53e-17   226-320   PB1 domain  
Glyma06g16570.1|PACid:16263180   3.36e-17   378-472   PB1 domain  
Glyma06g17320.1|PACid:16263270   0.0000000000785   715-790   PB1 domain  
Glyma06g17320.2|PACid:16263271   0.0000000177   715-781   PB1 domain  
Glyma06g17720.1|PACid:16263317   0.000000132   335-402   PB1 domain  
Glyma06g18770.1|PACid:16263443   4.32e-22   25-116   PB1 domain  
Glyma06g18770.2|PACid:16263444   3.73e-22   25-116   PB1 domain  
Glyma07g01800.1|PACid:16265824   0.0000000000000804   179-229,267-301   PB1 domain  
Glyma07g02080.1|PACid:16265861   0.0000000000142   186-269   PB1 domain  
Glyma07g03840.1|PACid:16266087   1.47e-22   70-163   PB1 domain  
Glyma07g06060.1|PACid:16266361   0.00000000000334   502-584   PB1 domain  
Glyma07g10950.1|PACid:16266913   6.54e-23   59-156   PB1 domain  
Glyma07g15640.1|PACid:16267393   0.00000696   1011-1076   PB1 domain  
Glyma07g15640.2|PACid:16267394   0.00000677   954-1019   PB1 domain  
Glyma07g16170.1|PACid:16267457   0.0000000000085   551-624   PB1 domain  
Glyma07g30300.1|PACid:16268257   1.41e-20   56-150   PB1 domain  
Glyma07g30810.1|PACid:16268312   3.01e-23   47-143   PB1 domain  
Glyma07g39430.1|PACid:16269278   0.0000000000000123   240-311   PB1 domain  
Glyma07g40270.1|PACid:16269382   0.0000000000255   548-623   PB1 domain  
Glyma08g00560.1|PACid:16269464   3.92e-17   395-492   PB1 domain  
Glyma08g00560.2|PACid:16269465   1.34e-16   393-481   PB1 domain  
Glyma08g00560.3|PACid:16269466   3.92e-17   393-490   PB1 domain  
Glyma08g01100.1|PACid:16269526   0.000000000132   729-804   PB1 domain  
Glyma08g01100.2|PACid:16269527   0.000000000113   637-712   PB1 domain  
Glyma08g01100.3|PACid:16269528   0.0000000000932   528-603   PB1 domain  
Glyma08g01470.1|PACid:16269572   2.78e-17   329-426   PB1 domain  
Glyma08g03140.1|PACid:16269782   0.0000873   812-868   PB1 domain  
Glyma08g03140.2|PACid:16269783   0.0000873   812-868   PB1 domain  
Glyma08g04070.1|PACid:16269886   1.86e-22   172-275   PB1 domain  
Glyma08g06470.1|PACid:16270188   1.01e-23   47-143   PB1 domain  
Glyma08g06940.1|PACid:16270243   3.04e-21   56-150   PB1 domain  
Glyma08g10550.1|PACid:16270663   0.00000105   774-854   PB1 domain  
Glyma08g10550.2|PACid:16270664   0.00000105   773-853   PB1 domain  
Glyma08g17640.1|PACid:16271501   2.65e-22   183-275   PB1 domain  
Glyma08g17650.1|PACid:16271502   4.91e-21   191-279   PB1 domain  
Glyma08g21460.1|PACid:16271970   0.000000000000145   178-225,263-297   PB1 domain  
Glyma08g21740.1|PACid:16272003   1.28e-20   202-303   PB1 domain  
Glyma08g21740.2|PACid:16272004   1.13e-20   185-286   PB1 domain  
Glyma08g22190.1|PACid:16272061   5.89e-22   82-171   PB1 domain  
Glyma08g25780.1|PACid:16272465   3.78e-20   192-280   PB1 domain  
Glyma08g37070.1|PACid:16273031   4.07e-21   229-331   PB1 domain  
Glyma08g38830.1|PACid:16273185   0.00000000000000206   66-172   PB1 domain  
Glyma08g47120.1|PACid:16274123   5.2e-19   103-190   PB1 domain  
Glyma08g47120.2|PACid:16274124   2.75e-19   103-190   PB1 domain  
Glyma09g08350.1|PACid:16275193   0.0000000103   960-1024   PB1 domain  
Glyma09g08350.2|PACid:16275194   0.00000000226   263-328   PB1 domain  
Glyma09g12000.1|PACid:16275494   1.1e-16   279-365   PB1 domain  
Glyma09g25230.1|PACid:16276207   9.48e-24   833-918   PB1 domain  
Glyma09g31140.1|PACid:16276804   9.81e-24   59-156   PB1 domain  
Glyma09g32570.1|PACid:16276952   3.68e-21   185-288   PB1 domain  
Glyma09g33630.1|PACid:16277070   2.6e-19   232-335   PB1 domain  
Glyma09g33630.2|PACid:16277071   2.5e-19   232-335   PB1 domain  
Glyma09g33630.3|PACid:16277072   2.5e-19   232-335   PB1 domain  
Glyma10g00290.1|PACid:16278084   0.000000608   52-99   PB1 domain  
Glyma10g03710.1|PACid:16278475   0.0000000000000265   96-144,192-215   PB1 domain  
Glyma10g03720.1|PACid:16278476   1.77e-22   125-229   PB1 domain  
Glyma10g03720.2|PACid:16278477   3.53e-16   125-216   PB1 domain  
Glyma10g04610.1|PACid:16278573   7.85e-19   156-264   PB1 domain  
Glyma10g27880.1|PACid:16280145   1.67e-16   19-109   PB1 domain  
Glyma10g30440.1|PACid:16280468   0.00000000000000128   109-201   PB1 domain  
Glyma10g30440.2|PACid:16280469   0.00000000000000128   109-201   PB1 domain  
Glyma10g30440.3|PACid:16280470   9.32e-21   109-212   PB1 domain  
Glyma10g32330.1|PACid:16280682   5.04e-18   1-80   PB1 domain  
Glyma10g32340.1|PACid:16280683   1.08e-22   114-220   PB1 domain  
Glyma10g33630.1|PACid:16280830   9.42e-21   170-263   PB1 domain  
Glyma10g37860.1|PACid:16281338   6.21e-24   766-856   PB1 domain  
Glyma10g41600.1|PACid:16281774   5.89e-22   63-163   PB1 domain  
Glyma10g41640.1|PACid:16281778   0.0000000051   93-176   PB1 domain  
Glyma11g13390.1|PACid:16283748   4.91e-21   854-941   PB1 domain  
Glyma11g14570.1|PACid:16283889   0.00000000000000184   11-73   PB1 domain  
Glyma11g15910.1|PACid:16284061   0.000000000432   622-698   PB1 domain  
Glyma11g31940.1|PACid:16285100   0.000000275   711-792   PB1 domain  
Glyma12g05390.1|PACid:16286496   1.67e-21   810-897   PB1 domain  
Glyma12g07560.1|PACid:16286759   0.000000000422   651-727   PB1 domain  
Glyma12g28550.1|PACid:16288180   0.0000000000267   522-597   PB1 domain  
Glyma12g28760.1|PACid:16288213   7.06e-24   25-111   PB1 domain  
Glyma12g29280.1|PACid:16288273   0.0000000294   667-736   PB1 domain  
Glyma12g29280.2|PACid:16288274   0.00000000027   533-611   PB1 domain  
Glyma12g29280.3|PACid:16288275   0.000000000348   665-743   PB1 domain  
Glyma13g01190.1|PACid:16289302   3.27e-24   39-129   PB1 domain  
Glyma13g01190.2|PACid:16289303   3.27e-24   39-129   PB1 domain  
Glyma13g01190.3|PACid:16289304   3.27e-24   39-129   PB1 domain  
Glyma13g17270.1|PACid:16290589   0.0000000157   976-1041   PB1 domain  
Glyma13g17270.2|PACid:16290590   0.00000000471   341-406   PB1 domain  
Glyma13g17750.1|PACid:16290645   1.28e-17   147-238   PB1 domain  
Glyma13g18910.1|PACid:16290773   1.03e-18   160-268   PB1 domain  
Glyma13g22750.1|PACid:16291217   0.000000000000736   117-192   PB1 domain  
Glyma13g23250.1|PACid:16291276   0.0000000000000027   272-356   PB1 domain  
Glyma13g29320.1|PACid:16291978   0.0000105   763-838   PB1 domain  
Glyma13g32730.1|PACid:16292393   7.85e-22   53-146   PB1 domain  
Glyma13g40310.1|PACid:16293267   0.000000000481   670-746   PB1 domain  
Glyma13g42160.1|PACid:16293496   3.21e-21   870-959   PB1 domain  
Glyma13g43050.1|PACid:16293593   0.00000000000000196   216-321   PB1 domain  
Glyma13g43050.2|PACid:16293594   0.00000000000000196   216-321   PB1 domain  
Glyma13g43310.1|PACid:16293621   3.53e-21   187-288   PB1 domain  
Glyma13g43780.1|PACid:16293675   6.47e-22   74-165   PB1 domain  
Glyma13g43800.1|PACid:16293677   0.00000000000559   72-150   PB1 domain  
Glyma14g00470.1|PACid:16293861   3.6e-22   480-571   PB1 domain  
Glyma14g03650.1|PACid:16294246   0.000000111   755-838   PB1 domain  
Glyma14g03650.2|PACid:16294247   0.000000111   755-838   PB1 domain  
Glyma14g36310.1|PACid:16296593   1.11e-19   49-147   PB1 domain  
Glyma14g36390.1|PACid:16296600   2.5e-21   245-348   PB1 domain  
Glyma14g38940.1|PACid:16296878   0.000000638   715-791   PB1 domain  
Glyma14g40540.1|PACid:16297069   0.0000000814   812-889   PB1 domain  
Glyma15g01550.1|PACid:16297253   6.38e-18   70-169   PB1 domain  
Glyma15g01550.2|PACid:16297254   0.000000000000314   69-162   PB1 domain  
Glyma15g01550.3|PACid:16297255   6.18e-18   69-168   PB1 domain  
Glyma15g01550.4|PACid:16297256   6.28e-18   69-168   PB1 domain  
Glyma15g01550.5|PACid:16297257   5.79e-18   69-168   PB1 domain  
Glyma15g01560.1|PACid:16297259   7.46e-21   72-163   PB1 domain  
Glyma15g02040.1|PACid:16297328   3.83e-21   199-300   PB1 domain  
Glyma15g02040.2|PACid:16297329   0.00000000000000132   199-287   PB1 domain  
Glyma15g02040.3|PACid:16297330   0.00000000000000132   199-287   PB1 domain  
Glyma15g02040.4|PACid:16297331   3.73e-21   199-300   PB1 domain  
Glyma15g02350.1|PACid:16297363   0.00000000000000128   190-295   PB1 domain  
Glyma15g02350.2|PACid:16297364   0.00000000000000128   190-295   PB1 domain  
Glyma15g03220.1|PACid:16297465   1.4e-21   850-938   PB1 domain  
Glyma15g06590.1|PACid:16297860   3.92e-22   53-146   PB1 domain  
Glyma15g09750.1|PACid:16298234   0.00000981   767-842   PB1 domain  
Glyma15g19980.1|PACid:16299380   0.0000000108   999-1063   PB1 domain  
Glyma15g24120.1|PACid:16299757   0.000000000000284   189-266   PB1 domain  
Glyma15g24120.2|PACid:16299758   0.000000000000265   189-266   PB1 domain  
Glyma15g28430.1|PACid:16299897   6.38e-20   179-267   PB1 domain  
Glyma15g28430.2|PACid:16299898   6.38e-20   179-267   PB1 domain  
Glyma15g41460.1|PACid:16300728   4.91e-21   177-265   PB1 domain  
Glyma15g41470.1|PACid:16300729   4.91e-22   184-275   PB1 domain  
Glyma15g41470.2|PACid:16300730   4.58e-22   184-275   PB1 domain  
Glyma16g00220.1|PACid:16300944   0.0000000000181   540-615   PB1 domain  
Glyma16g00420.1|PACid:16300970   2.13e-23   25-113   PB1 domain  
Glyma16g02650.1|PACid:16301238   0.00000000000206   559-639   PB1 domain  
Glyma16g30180.1|PACid:16303382   1.21e-21   862-948   PB1 domain  
Glyma17g01320.1|PACid:16304026   0.0000000000000687   255-323   PB1 domain  
Glyma17g04760.1|PACid:16304421   1.81e-17   166-254   PB1 domain  
Glyma17g04760.2|PACid:16304422   0.000000000000314   166-243   PB1 domain  
Glyma17g05220.1|PACid:16304477   0.0000000153   976-1041   PB1 domain  
Glyma17g07320.1|PACid:16304733   3.6e-24   39-129   PB1 domain  
Glyma17g09210.1|PACid:16304953   0.000000000000146   3-79   PB1 domain  
Glyma17g09240.1|PACid:16304956   6.28e-19   26-115   PB1 domain  
Glyma17g11350.1|PACid:16305205   3.38e-23   50-145   PB1 domain  
Glyma17g11580.1|PACid:16305229   0.00000000000000294   273-356   PB1 domain  
Glyma17g12080.1|PACid:16305288   0.0000000000000471   114-194   PB1 domain  
Glyma17g32550.1|PACid:16306822   0.000000000841   734-795   PB1 domain  
Glyma17g32550.2|PACid:16306823   0.0000000000523   258-324   PB1 domain  
Glyma17g37580.1|PACid:16307359   0.000000137   830-907   PB1 domain  
Glyma18g05330.1|PACid:16307991   0.000000388   711-789   PB1 domain  
Glyma18g38270.1|PACid:16309882   5.36e-19   157-247   PB1 domain  
Glyma18g40180.1|PACid:16310033   0.00000000000054   527-600   PB1 domain  
Glyma19g34370.1|PACid:16313720   1.47e-19   104-192   PB1 domain  
Glyma19g34370.2|PACid:16313721   0.0000000000000137   104-181   PB1 domain  
Glyma19g34370.3|PACid:16313722   0.00000000000000598   104-177   PB1 domain  
Glyma19g34380.1|PACid:16313723   1.37e-22   123-231   PB1 domain  
Glyma19g35180.1|PACid:16313817   8.18e-18   97-204   PB1 domain  
Glyma19g35180.2|PACid:16313818   0.000000000000124   97-193   PB1 domain  
Glyma19g35180.3|PACid:16313819   0.00000000000017   97-194   PB1 domain  
Glyma19g35180.4|PACid:16313820   1.13e-17   78-186   PB1 domain  
Glyma19g40970.1|PACid:16314502   3.63e-16   80-169   PB1 domain  
Glyma19g40970.2|PACid:16314503   0.00000000000491   80-158   PB1 domain  
Glyma19g43450.1|PACid:16314798   5.69e-18   105-211   PB1 domain  
Glyma20g25580.1|PACid:16316813   0.00000000589   92-175   PB1 domain  
Glyma20g25620.1|PACid:16316817   9.81e-22   63-163   PB1 domain  
Glyma20g29960.1|PACid:16317320   7.85e-24   793-887   PB1 domain  
Glyma20g33970.1|PACid:16317779   1.28e-22   171-264   PB1 domain  
Glyma20g35270.1|PACid:16317934   2.35e-22   179-287   PB1 domain  
Glyma20g35280.1|PACid:16317935   3.24e-21   88-183   PB1 domain  
Glyma20g36790.1|PACid:16318109   1.67e-21   113-208   PB1 domain  
 
Weak hits:
Glyma13g17750.2|PACid:16290646   0.00392   147-193   PB1 domain  
Glyma13g17750.3|PACid:16290647   0.00647   147-192   PB1 domain  
Glyma13g29320.2|PACid:16291979   0.000981   763-830   PB1 domain  
Glyma14g36390.2|PACid:16296601   0.000167   245-288   PB1 domain  
Glyma14g36390.3|PACid:16296602   0.000167   245-288   PB1 domain  
Glyma15g01550.6|PACid:16297258   0.00196   69-112   PB1 domain  
Glyma19g36570.1|PACid:16313987   0.018   361-431   PB1 domain  
Glyma19g39340.1|PACid:16314303   0.00245   487-548   PB1 domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   60222 60222
No Yes Homo sapiens 76_38 Human 75 75
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 21
No Yes Pongo abelii 76_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 22
No Yes Papio anubis 76 Olive baboon 21 21
No Yes Macaca mulatta 76_1 Rhesus monkey 27 27
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 33 33
No Yes Otolemur garnettii 76_3 Small-eared galago 20 20
No Yes Microcebus murinus 76_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 76_5.0 Norway rat 21 21
No Yes Mus musculus 76_38 House mouse 43 43
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 18 18
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 32 32
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 21
No Yes Oryctolagus cuniculus 76_2 Rabbit 17 17
No Yes Ochotona princeps 76 American pika 13 13
No Yes Tupaia belangeri 76 Northern tree shrew 12 12
No Yes Sus scrofa 76_10.2 Pig 24 24
No Yes Bos taurus 76_3.1 Cattle 22 22
No Yes Ovis aries 76_3.1 Sheep 20 20
No Yes Vicugna pacos 76_1 Alpaca 12 12
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 76_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 76_1 Giant panda 23 23
No Yes Canis familiaris 76_3.1 Dog 22 22
No Yes Felis catus 76_6.2 Domestic cat 21 21
No Yes Equus caballus 76_2 Horse 20 20
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 76_1 Large flying fox 16 16
No Yes Sorex araneus 76_1 European shrew 9 9
No Yes Erinaceus europaeus 76 Western European hedgehog 12 12
No Yes Procavia capensis 76_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 76_3 African savanna elephant 22 22
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 25 24
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 21 21
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 76_5 Platypus 18 18
No Yes Saccoglossus kowalevskii v3.0   38 38
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 76_2 Turkey 21 21
No Yes Gallus gallus 76_4 Chicken 19 19
No Yes Anas platyrhynchos 76_1.0 Mallard 19 19
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 21 21
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 18 18
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 23
No Yes Anolis carolinensis 76_2.0 Green anole 18 18
No Yes Xenopus laevis African clawed frog 34 34
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 28 28
No Yes Latimeria chalumnae 76_1 Coelacanth 27 27
No Yes Lepisosteus oculatus 76 Spotted gar 25 25
No Yes Gadus morhua 76_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 27 27
No Yes Takifugu rubripes 76_4 Torafugu 44 44
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 21 21
No Yes Oryzias latipes 76_1 Japanese medaka 27 27
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 19 19
No Yes Poecilia formosa 76 Amazon molly 19 19
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 26 26
No Yes Astyanax mexicanus 76 Mexican tetra 23 23
No Yes Danio rerio 76_9 Zebrafish 33 33
No Yes Oikopleura dioica   4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 76 Vase tunicate 9 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 10 10
No Yes Adineta vaga   17 17
No Yes Octopus bimaculoides 280   13 13
No Yes Crassostrea gigas 22 Pacific oyster 13 13
No Yes Lottia gigantea Owl limpet 8 8
No Yes Helobdella robusta   7 7
No Yes Capitella sp. I   10 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 5 5
No Yes Heliconius melpomene Postman butterfly 6 6
No Yes Bombyx mori Domestic silkworm 5 5
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 6
No Yes Linepithema humile v1.1 Argentine ant 10 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   5 5
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 6
No Yes Lucilia cuprina Australian sheep blowfly 5 5
No Yes Drosophila grimshawi 1.3   6 6
No Yes Drosophila willistoni 1.3   6 6
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   6 6
No Yes Drosophila suzukii   5 4
No Yes Drosophila yakuba 1.3   6 6
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   6 6
No Yes Drosophila melanogaster 76_5 Fruit fly 13 13
No Yes Drosophila erecta 1.3   6 6
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   6 6
No Yes Drosophila mojavensis 1.3   6 6
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 5 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 6
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 6 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 7 7
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   7 7
No Yes Daphnia pulex Common water flea 11 11
No Yes Strigamia maritima 22   9 9
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 5 5
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 6
No Yes Pristionchus pacificus   11 11
No Yes Meloidogyne incognita Southern root-knot nematode 5 5
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 7
No Yes Caenorhabditis japonica   4 4
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 8 8
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   4 4
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 5 5
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 11 11
No Yes Hydra vulgaris   11 11
No Yes Amphimedon queenslandica   11 11
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   6 6
No Yes Capsaspora owczarzaki ATCC 30864   8 8
No Yes Conidiobolus coronatus NRRL28638 v1.0   7 7
No Yes Mortierella verticillata NRRL 6337   15 15
No Yes Phycomyces blakesleeanus   13 13
No Yes Rhizopus oryzae RA 99-880   12 12
No Yes Mucor circinelloides   12 12
No Yes Rhizomucor miehei CAU432   12 12
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   6 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   4 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   5 5
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   4 4
No Yes Microbotryum violaceum 22   7 7
No Yes Wallemia sebi v1.0   7 7
No Yes Sphaerobolus stellatus v1.0   11 11
No Yes Piloderma croceum F 1598 v1.0   10 10
No Yes Serpula lacrymans var. lacrymans S7.9   4 4
No Yes Coniophora puteana   8 8
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   8 8
No Yes Pisolithus tinctorius Marx 270 v1.0   6 6
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   6 6
No Yes Pleurotus ostreatus Oyster mushroom 6 6
No Yes Amanita thiersii Skay4041 v1.0   5 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 9
No Yes Galerina marginata v1.0   6 6
No Yes Hebeloma cylindrosporum h7 v2.0   8 8
No Yes Laccaria bicolor S238N-H82   9 9
No Yes Agaricus bisporus var. bisporus   6 6
No Yes Schizophyllum commune   5 5
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 6
No Yes Heterobasidion annosum   5 5
No Yes Gloeophyllum trabeumv1.0   6 6
No Yes Punctularia strigosozonata v1.0   10 10
No Yes Sebacina vermifera MAFF 305830 v1.0   6 6
No Yes Fomitiporia mediterranea v1.0   5 5
No Yes Tulasnella calospora AL13/4D v1.0   8 8
No Yes Postia placenta   8 8
No Yes Wolfiporia cocos MD-104 SS10 v1.0   8 8
No Yes Fomitopsis pinicolav1.0   9 9
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 12
No Yes Phanerochaete chrysosporium RP-78 2.1   5 5
No Yes Dichomitus squalens   6 6
No Yes Trametes versicolor v1.0   6 6
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   4 4
No Yes Magnaporthe grisea 70-15   4 4
No Yes Podospora anserina   4 4
No Yes Sporotrichum thermophile ATCC 42464   4 4
No Yes Thielavia terrestris NRRL 8126   4 4
No Yes Chaetomium globosum CBS 148.51   4 4
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   4 4
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 4 4
No Yes Verticillium albo-atrum VaMs.102   3 3
No Yes Verticillium dahliae VdLs.17   4 4
No Yes Acremonium alcalophilumv 1.0   4 4
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   4 4
No Yes Nectria haematococca mpVI   4 4
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   4 4
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   4 4
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   4 4
No Yes Trichoderma virens Gv29-8   4 4
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 4
No Yes Amorphotheca resinae v1.0 Creosote fungus 4 4
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   4 4
No Yes Leptosphaeria maculans 22   4 4
No Yes Setosphaeria turcica v1.0   4 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   4 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 4
No Yes Alternaria brassicicola   4 4
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   4 4
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   4 4
No Yes Mycosphaerella graminicola IPO323   4 4
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   4 4
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 4
No Yes Paracoccidioides brasiliensis Pb18   4 4
No Yes Coccidioides posadasii RMSCC 3488   4 4
No Yes Coccidioides immitis RS   4 4
No Yes Ajellomyces dermatitidis SLH14081   4 4
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   4 4
No Yes Trichophyton verrucosum HKI 0517   4 4
No Yes Arthroderma benhamiae CBS 112371   4 4
No Yes Trichophyton tonsurans CBS 112818   4 4
No Yes Trichophyton rubrum CBS 118892   4 4
No Yes Uncinocarpus reesii 1704   4 4
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 4
No Yes Penicillium chrysogenum v1.0   4 4
No Yes Aspergillus acidus v1.0   4 4
No Yes Aspergillus fumigatus Af293   4 4
No Yes Aspergillus brasiliensis v1.0   4 4
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   4 4
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   4 4
No Yes Aspergillus carbonarius ITEM 5010   4 4
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   4 4
No Yes Aspergillus tubingensis v1.0   4 4
No Yes Aspergillus wentii v1.0   4 4
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   4 4
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   4 4
No Yes Tuber melanosporum Mel28 22   4 4
No Yes Tuber melanosporum Vittad Perigord truffle 4 4
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   3 3
No Yes Pichia membranifaciensv1.0   5 5
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   3 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   3 3
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   3 3
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   3 3
No Yes Candida lusitaniae ATCC 42720   3 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   2 2
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   3 3
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   2 2
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   3 3
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   3 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   15 15
No Yes Spizellomyces punctatus DAOM BR117   11 11
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   5 5
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   42 42
No Yes Pinus taeda Loblolly pine 58 54
No Yes Picea abies Norway spruce 52 51
No Yes Eucalyptus grandis v201 Rose gum 108 108
No Yes Theobroma cacao B97-61/B2 v1 Cacao 65 65
No Yes Gossypium raimondii v221   341 341
No Yes Citrus clementina v165   105 105
No Yes Citrus sinensis v154 Sweet orange 140 140
No Yes Thellungiella halophila v173   92 92
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 143 143
No Yes Capsella rubella v183   94 94
No Yes Arabidopsis lyrata Lyrate rockcress 86 86
No Yes Arabidopsis thaliana 10 Thale cress 118 118
No Yes Carica papaya Papaya 50 50
No Yes Medicago truncatula Barrel medic 134 134
No Yes Phaseolus vulgaris v186 French bean 103 103
No Yes Glycine max v109 Soybean 218 218
No Yes Cucumis sativus v122 Cucumber 121 121
No Yes Fragaria vesca Wild strawberry 69 69
No Yes Malus domestica v196 Apple 142 142
No Yes Prunus persica v139 Peach 74 74
No Yes Linum usitatissimum v200 Flax 115 115
No Yes Manihot esculenta v147 Cassava 123 122
No Yes Populus trichocarpa v156 Black cottonwood 139 139
No Yes Vitis vinifera Wine grape 58 58
No Yes Mimulus guttatus v140 Spotted monkey flower 81 81
No Yes Solanum lycopersicum v.2.3 Tomato 73 72
No Yes Solanum tuberosum Potato 113 113
No Yes Actinidia chinensis Hongyang   152 151
No Yes Aquilegia coerulea v195   102 102
No Yes Triticum urartu 22   59 59
No Yes Triticum aestivum 22 Bread wheat 185 185
No Yes Aegilops tauschii 22   60 59
No Yes Brachypodium distachyon Stiff brome 94 94
No Yes Oryza barthii 22 African wild rice 99 98
No Yes Oryza meridionalis 22   104 98
No Yes Oryza glumaepatula 22   104 104
No Yes Oryza glaberrima African rice 72 72
No Yes Oryza punctata 22   96 96
No Yes Oryza nivara 22   125 124
No Yes Oryza brachyantha 22 Malo sina 69 69
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 133 133
No Yes Oryza sativa v193 Rice 133 133
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 99 98
No Yes Panicum virgatum v202 Switchgrass 145 145
No Yes Setaria italica v164 Foxtail millet 108 108
No Yes Zea mays subsp. mays Maize 164 164
No Yes Zea mays v181 Maize 178 178
No Yes Sorghum bicolor Sorghum 74 73
No Yes Musa balbisiana Balbis banana 131 131
No Yes Musa acuminata 22 Wild Malaysian banana 132 132
No Yes Amborella trichopoda 22   54 54
No Yes Physcomitrella patens   25 25
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   5 4
No Yes Ostreococcus lucimarinus CCE9901   3 2
No Yes Ostreococcus tauri   5 4
No Yes Bathycoccus prasinos   5 4
No Yes Micromonas sp. RCC299   5 5
No Yes Micromonas pusilla CCMP1545 v3.0   7 5
No Yes Porphyridium purpureum 02_2012   4 4
No Yes Thecamonas trahens ATCC 50062   9 9
No Yes Bigelowiella natans CCMP2755 22   14 14
No Yes Cyanophora paradoxa   5 5
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   1 1
No Yes Albugo laibachii 22   35 35
No Yes Pythium iwayamai DAOM BR242034 22   8 8
No Yes Pythium arrhenomanes ATCC 12531 22   5 5
No Yes Pythium ultimum v1.7-2   7 7
No Yes Pythium aphanidermatum DAOM BR444 22   5 5
No Yes Pythium irregulare DAOM BR486 22   7 7
No Yes Pythium vexans DAOM BR484 22   6 6
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   7 7
No Yes Phytophthora capsici   6 6
No Yes Hyaloperonospora arabidopsidis 22   14 14
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   9 9
No Yes Paramecium tetraurelia   18 18
No Yes Tetrahymena thermophila SB210 1   5 5
No Yes Symbiodinium minutum clade B1 v1.2   4 4
No Yes Naegleria gruberi   15 15
No Yes Guillardia theta CCMP2712 v1.0   11 11
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 43 43
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 9 9
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   5 5
No Yes Cryptococcus neoformans JEC21   4 4
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   4 4
No Yes Coccidioides posadasii str. Silveira   4 4
No Yes Coccidioides immitis RMSCC 3703   4 4
No Yes Coccidioides immitis RMSCC 2394   4 4
No Yes Coccidioides immitis H538.4   4 4
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   4 4
No Yes Aspergillus fumigatus A1163   4 4
No Yes Candida albicans WO-1   3 3
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   2 2
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   8 8
No Yes Batrachochytrium dendrobatidis JAM81   6 6
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 65 64
No Yes Hordeum vulgare 22 Domesticated barley 164 164
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 82 82
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 73 73
No Yes Homo sapiens (NCBI version) Human 35 35
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 19 19
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 8 8
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   5 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 6 6
No Yes Lotus japonicus (Early assembly)   58 58
No Yes Malus x domestica (Duplicate) Apple 142 142
No Yes Ricinus communis (Early assembly) Castor bean 58 58
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   149 146
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 69 68
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 73 72
No Yes Phoenix dactylifera (Early draft) Date palm 43 43
No Yes Homo sapiens 69_37 Human 19 19
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 16
No Yes Gorilla gorilla 69_3.1 Western gorilla 16 16
No Yes Pongo abelii 69_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 18 18
No Yes Macaca mulatta 69_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 21 21
No Yes Otolemur garnettii 69_3 Small-eared galago 20 20
No Yes Microcebus murinus 69_1 Gray mouse lemur 14 14
No Yes Rattus norvegicus 69_3.4 Norway rat 22 22
No Yes Mus musculus 69_38 House mouse 20 20
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 12 12
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 16 16
No Yes Cavia porcellus 69_3 Domestic guinea pig 19 19
No Yes Oryctolagus cuniculus 69_2 Rabbit 15 15
No Yes Ochotona princeps 69 American pika 13 13
No Yes Tupaia belangeri 69 Northern tree shrew 12 12
No Yes Sus scrofa 69_10.2 Pig 19 19
No Yes Bos taurus 69_3.1 Cattle 21 21
No Yes Vicugna pacos 69_1 Alpaca 12 12
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 18 18
No Yes Mustela putorius furo 69_1.0 Domestic ferret 18 18
No Yes Ailuropoda melanoleuca 69_1 Giant panda 20 20
No Yes Canis familiaris 69_3.1 Dog 19 19
No Yes Felis catus 69 Domestic cat 15 15
No Yes Equus caballus 69_2 Horse 19 19
No Yes Myotis lucifugus 69_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 69_1 Large flying fox 16 16
No Yes Sorex araneus 69_1 European shrew 9 9
No Yes Erinaceus europaeus 69 Western European hedgehog 12 12
No Yes Procavia capensis 69_1 Cape rock hyrax 15 15
No Yes Loxodonta africana 69_3 African savanna elephant 18 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 11
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 12 12
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 11 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 17 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 21 21
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 17 17
No Yes Gallus gallus 69_2 Chicken 17 17
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 20 20
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 18 18
No Yes Anolis carolinensis 69_2.0 Green anole 16 16
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 21 21
No Yes Latimeria chalumnae 69_1 Coelacanth 19 19
No Yes Gadus morhua 69_1 Atlantic cod 16 16
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 20 20
No Yes Takifugu rubripes 69_4 Torafugu 17 17
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 18 18
No Yes Oryzias latipes 69_1 Japanese medaka 20 20
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 19 19
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 22 22
No Yes Danio rerio 69_9 Zebrafish 24 24
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 7 7
No Yes Ciona intestinalis 69 Vase tunicate 8 8
No Yes Drosophila melanogaster 69_5 Fruit fly 5 5
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 85 85
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21163 21134
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   11 11
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1465 1463
No Yes Uniprot 2018_03 genome   21109 21065
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   23 23
No Yes Protein Data Bank (all PDB sequenc)   144 144
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   263 263
No Yes TargetDB (Targets)   71 71
No Yes UniProt viral sequences (Viral)   5 5

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