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Plexin repeat superfamily domain assignments
in
Mus musculus 76_38

Assignment details

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Mus musculus 76_38 has 96 significant domains in 93 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000000161   0.00000000000022   22-81   Plexin repeat  
ENSMUSP00000000299   0.000000000000183   22-81   Plexin repeat  
ENSMUSP00000000641   0.000000000157   518-567   Plexin repeat  
ENSMUSP00000001256   0.0000000366   527-568   Plexin repeat  
ENSMUSP00000001327   0.0000000000173   43-99   Plexin repeat  
ENSMUSP00000002079   0.0000000000068   464-515   Plexin repeat  
ENSMUSP00000004326   0.000000000288   492-541   Plexin repeat  
  0.000314   790-824   Plexin repeat  
  0.051   637-672   Plexin repeat  
ENSMUSP00000015511   0.0000000000379   551-603   Plexin repeat  
  0.0641   709-747   Plexin repeat  
ENSMUSP00000019791   0.000000000907   514-562   Plexin repeat  
ENSMUSP00000021028   0.000000000000199   27-82   Plexin repeat  
ENSMUSP00000021107   0.00000000173   28-78   Plexin repeat  
ENSMUSP00000021900   0.0000000000000706   502-553   Plexin repeat  
ENSMUSP00000026225   0.000000000000419   506-552   Plexin repeat  
ENSMUSP00000026360   0.0000000000105   45-100   Plexin repeat  
ENSMUSP00000027952   0.00000000000419   511-562   Plexin repeat  
  0.0000406   807-841   Plexin repeat  
ENSMUSP00000028348   0.0000000000000994   21-78   Plexin repeat  
ENSMUSP00000029700   0.00000000000536   496-546   Plexin repeat  
ENSMUSP00000030568   0.0000000000262   513-564   Plexin repeat  
ENSMUSP00000030714   0.0000000000855   516-567   Plexin repeat  
ENSMUSP00000030868   0.000000000209   533-585   Plexin repeat  
ENSMUSP00000032754   0.00000000000082   512-563   Plexin repeat  
ENSMUSP00000035203   0.00000000000209   524-571   Plexin repeat  
ENSMUSP00000042211   0.0000000138   491-528   Plexin repeat  
ENSMUSP00000051731   0.0000000000174   471-520   Plexin repeat  
  0.00523   766-800   Plexin repeat  
ENSMUSP00000054944   0.0000000000000994   21-78   Plexin repeat  
ENSMUSP00000057494   0.0000000000192   497-547   Plexin repeat  
ENSMUSP00000061123   0.0000000152   514-545   Plexin repeat  
ENSMUSP00000063066   0.000000000102   513-565   Plexin repeat  
  0.0000196   812-844   Plexin repeat  
ENSMUSP00000069024   0.000000000022   486-537   Plexin repeat  
ENSMUSP00000069416   0.00000000000513   26-78   Plexin repeat  
ENSMUSP00000070811   0.00000000167   28-78   Plexin repeat  
ENSMUSP00000071966   0.00000000000772   482-533   Plexin repeat  
  0.00667   638-670   Plexin repeat  
  0.0262   1024-1066   Plexin repeat  
ENSMUSP00000073152   0.000000000785   516-566   Plexin repeat  
ENSMUSP00000073612   0.00000000000244   518-572   Plexin repeat  
ENSMUSP00000075420   0.000000000855   514-562   Plexin repeat  
ENSMUSP00000075674   0.00000000732   514-562   Plexin repeat  
ENSMUSP00000077014   0.00000000785   514-562   Plexin repeat  
ENSMUSP00000077691   0.0000000155   514-545   Plexin repeat  
ENSMUSP00000079324   0.00000000000139   516-562   Plexin repeat  
ENSMUSP00000079400   0.000000000628   516-567   Plexin repeat  
ENSMUSP00000087457   0.000000000000288   25-83   Plexin repeat  
ENSMUSP00000087643   0.0000000000141   521-573   Plexin repeat  
ENSMUSP00000088331   0.0000141   519-548   Plexin repeat  
ENSMUSP00000088333   0.0000162   519-547   Plexin repeat  
ENSMUSP00000092621   0.0000000000855   516-567   Plexin repeat  
ENSMUSP00000096939   0.0000000000576   454-505   Plexin repeat  
ENSMUSP00000099528   0.00000000785   514-562   Plexin repeat  
ENSMUSP00000099529   0.00000000802   514-562   Plexin repeat  
ENSMUSP00000099530   0.00000000802   514-562   Plexin repeat  
ENSMUSP00000099531   0.00000000732   514-562   Plexin repeat  
ENSMUSP00000099588   0.000000000785   516-566   Plexin repeat  
ENSMUSP00000099589   0.000000000785   516-566   Plexin repeat  
ENSMUSP00000099590   0.000000000785   516-566   Plexin repeat  
ENSMUSP00000099591   0.000000000785   516-566   Plexin repeat  
ENSMUSP00000102066   0.00000000173   28-78   Plexin repeat  
ENSMUSP00000102068   0.00000000173   28-78   Plexin repeat  
ENSMUSP00000102069   0.00000000173   28-78   Plexin repeat  
ENSMUSP00000102835   0.0000136   479-508   Plexin repeat  
ENSMUSP00000103006   0.000000000183   512-544   Plexin repeat  
ENSMUSP00000103155   0.00000000000558   364-414   Plexin repeat  
ENSMUSP00000104955   0.0000000000174   471-520   Plexin repeat  
  0.00523   766-800   Plexin repeat  
ENSMUSP00000105666   0.0000000000000706   502-553   Plexin repeat  
ENSMUSP00000105667   0.0000000000000706   502-553   Plexin repeat  
ENSMUSP00000108136   0.0000000000000942   21-78   Plexin repeat  
ENSMUSP00000109403   0.000000000000241   22-81   Plexin repeat  
ENSMUSP00000109615   0.00000000157   518-550   Plexin repeat  
ENSMUSP00000110643   0.0000000000174   500-543   Plexin repeat  
ENSMUSP00000110680   0.00000000000497   26-78   Plexin repeat  
ENSMUSP00000110748   0.0000000000000876   509-561   Plexin repeat  
  0.000102   808-841   Plexin repeat  
  0.0392   653-685   Plexin repeat  
ENSMUSP00000111102   0.00000000000139   516-562   Plexin repeat  
ENSMUSP00000111103   0.00000000000139   516-562   Plexin repeat  
ENSMUSP00000111109   0.000000000732   488-536   Plexin repeat  
ENSMUSP00000112536   0.0000000000209   497-547   Plexin repeat  
ENSMUSP00000114497   0.000000000000141   22-81   Plexin repeat  
ENSMUSP00000117815   0.0000000000000942   21-78   Plexin repeat  
ENSMUSP00000118087   0.00000116   13-48   Plexin repeat  
ENSMUSP00000120011   0.000000000924   514-562   Plexin repeat  
ENSMUSP00000120026   0.00000000222   25-53   Plexin repeat  
ENSMUSP00000120249   0.00000523   3-38   Plexin repeat  
ENSMUSP00000121442   0.000000000907   514-562   Plexin repeat  
ENSMUSP00000123227   0.000000000981   47-85   Plexin repeat  
ENSMUSP00000125909   0.00000000000536   496-546   Plexin repeat  
ENSMUSP00000127604   0.00000000173   28-78   Plexin repeat  
ENSMUSP00000128153   0.0000000000732   516-567   Plexin repeat  
ENSMUSP00000128510   0.00000000000536   496-546   Plexin repeat  
ENSMUSP00000128887   0.00000000000536   496-546   Plexin repeat  
ENSMUSP00000129081   0.0000141   519-548   Plexin repeat  
ENSMUSP00000130985   0.0000000366   527-568   Plexin repeat  
ENSMUSP00000131840   0.000000000102   513-565   Plexin repeat  
  0.0000196   812-844   Plexin repeat  
ENSMUSP00000137395   0.000000000000419   506-552   Plexin repeat  
ENSMUSP00000137734   0.0000000000000471   22-81   Plexin repeat  
ENSMUSP00000137865   0.0000000196   22-50   Plexin repeat  
ENSMUSP00000138321   0.000000000000419   506-552   Plexin repeat  
 
Weak hits:
ENSMUSP00000009435   0.0251   37-63   Plexin repeat  
ENSMUSP00000017561   0.00209   303-337   Plexin repeat  
ENSMUSP00000028081   0.000837   326-372   Plexin repeat  
ENSMUSP00000103191   0.00227   310-344   Plexin repeat  
ENSMUSP00000104906   0.051   423-458   Plexin repeat  
ENSMUSP00000110350   0.00082   326-372   Plexin repeat  
ENSMUSP00000110351   0.000732   277-323   Plexin repeat  
ENSMUSP00000124313   0.0178   34-61   Plexin repeat  
ENSMUSP00000124774   0.00628   7-35   Plexin repeat  

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Select to display   Genome       Domains   Proteins
No Yes ALL   45094 45094
No Yes Homo sapiens 76_38 Human 143 139
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 76_3.1 Western gorilla 58 54
No Yes Pongo abelii 76_2 Sumatran orangutan 43 40
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 42 40
No Yes Papio anubis 76 Olive baboon 47 45
No Yes Macaca mulatta 76_1 Rhesus monkey 66 63
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 90 87
No Yes Otolemur garnettii 76_3 Small-eared galago 39 37
No Yes Microcebus murinus 76_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 76_5.0 Norway rat 44 42
No Yes Mus musculus 76_38 House mouse 96 93
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 44 41
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 40 36
No Yes Cavia porcellus 76_3 Domestic guinea pig 42 40
No Yes Oryctolagus cuniculus 76_2 Rabbit 42 39
No Yes Ochotona princeps 76 American pika 29 27
No Yes Tupaia belangeri 76 Northern tree shrew 22 22
No Yes Sus scrofa 76_10.2 Pig 41 40
No Yes Bos taurus 76_3.1 Cattle 39 37
No Yes Ovis aries 76_3.1 Sheep 42 41
No Yes Vicugna pacos 76_1 Alpaca 14 14
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 76_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 76_1 Giant panda 49 46
No Yes Canis familiaris 76_3.1 Dog 51 47
No Yes Felis catus 76_6.2 Domestic cat 40 38
No Yes Equus caballus 76_2 Horse 54 47
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 76_1 Large flying fox 39 38
No Yes Sorex araneus 76_1 European shrew 23 23
No Yes Erinaceus europaeus 76 Western European hedgehog 22 21
No Yes Procavia capensis 76_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 76_3 African savanna elephant 60 53
No Yes Echinops telfairi 76 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 45 42
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 76_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 49 47
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 38 37
No Yes Ornithorhynchus anatinus 76_5 Platypus 30 30
No Yes Saccoglossus kowalevskii v3.0   12 12
No Yes Petromyzon marinus 76_7.0 Sea lamprey 17 17
No Yes Meleagris gallopavo 76_2 Turkey 36 34
No Yes Gallus gallus 76_4 Chicken 39 36
No Yes Anas platyrhynchos 76_1.0 Mallard 30 28
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 33 31
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 36 34
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 46 43
No Yes Anolis carolinensis 76_2.0 Green anole 40 37
No Yes Xenopus laevis African clawed frog 52 48
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 45 41
No Yes Latimeria chalumnae 76_1 Coelacanth 41 40
No Yes Lepisosteus oculatus 76 Spotted gar 59 56
No Yes Gadus morhua 76_1 Atlantic cod 56 53
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 77 73
No Yes Takifugu rubripes 76_4 Torafugu 308 286
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 75 70
No Yes Oryzias latipes 76_1 Japanese medaka 82 73
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 64 60
No Yes Poecilia formosa 76 Amazon molly 69 65
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 94 87
No Yes Astyanax mexicanus 76 Mexican tetra 60 56
No Yes Danio rerio 76_9 Zebrafish 103 100
No Yes Oikopleura dioica   6 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 34 32
No Yes Adineta vaga   6 6
No Yes Octopus bimaculoides 280   13 12
No Yes Crassostrea gigas 22 Pacific oyster 16 15
No Yes Lottia gigantea Owl limpet 12 10
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   8 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 9 9
No Yes Heliconius melpomene Postman butterfly 8 7
No Yes Bombyx mori Domestic silkworm 6 5
No Yes Nasonia vitripennis Jewel wasp 10 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 21 21
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 9
No Yes Linepithema humile v1.1 Argentine ant 9 9
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 9 8
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 8 7
No Yes Atta cephalotes v1.1   8 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 7
No Yes Lucilia cuprina Australian sheep blowfly 7 6
No Yes Drosophila grimshawi 1.3   10 9
No Yes Drosophila willistoni 1.3   9 8
No Yes Drosophila pseudoobscura 2.13   10 8
No Yes Drosophila persimilis 1.3   10 8
No Yes Drosophila suzukii   9 8
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   9 8
No Yes Drosophila melanogaster 76_5 Fruit fly 27 25
No Yes Drosophila erecta 1.3   8 8
No Yes Drosophila ananassae 1.3   8 7
No Yes Drosophila virilis 1.2   8 8
No Yes Drosophila mojavensis 1.3   9 8
No Yes Megaselia scalaris 22   5 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 10 9
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 8
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 8
No Yes Tribolium castaneum 3.0 Red flour beetle 8 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 8 8
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   6 5
No Yes Daphnia pulex Common water flea 9 8
No Yes Strigamia maritima 22   9 8
No Yes Sarcoptes scabiei   7 6
No Yes Tetranychus urticae Two-spotted spider mite 7 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 6
No Yes Pristionchus pacificus   4 3
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   6 6
No Yes Caenorhabditis brenneri   9 8
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 11 11
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   9 9
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 9 9
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 9 8
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   20 20
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Cyanophora paradoxa   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 53 48
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 21 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 9 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Homo sapiens 75_37 (old version GRC) Human 164 159
No Yes Homo sapiens (NCBI version) Human 67 64
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 42 40
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 7 7
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 7 7
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 5
No Yes Homo sapiens 69_37 Human 43 40
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 34 33
No Yes Gorilla gorilla 69_3.1 Western gorilla 40 38
No Yes Pongo abelii 69_2 Sumatran orangutan 41 38
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 39 37
No Yes Macaca mulatta 69_1 Rhesus monkey 40 37
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 43 42
No Yes Otolemur garnettii 69_3 Small-eared galago 39 37
No Yes Microcebus murinus 69_1 Gray mouse lemur 32 30
No Yes Rattus norvegicus 69_3.4 Norway rat 41 39
No Yes Mus musculus 69_38 House mouse 42 40
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 36 34
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 42 39
No Yes Cavia porcellus 69_3 Domestic guinea pig 41 39
No Yes Oryctolagus cuniculus 69_2 Rabbit 38 36
No Yes Ochotona princeps 69 American pika 29 27
No Yes Tupaia belangeri 69 Northern tree shrew 22 22
No Yes Sus scrofa 69_10.2 Pig 28 27
No Yes Bos taurus 69_3.1 Cattle 38 36
No Yes Vicugna pacos 69_1 Alpaca 14 14
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 37 35
No Yes Mustela putorius furo 69_1.0 Domestic ferret 41 38
No Yes Ailuropoda melanoleuca 69_1 Giant panda 40 38
No Yes Canis familiaris 69_3.1 Dog 42 39
No Yes Felis catus 69 Domestic cat 29 28
No Yes Equus caballus 69_2 Horse 40 37
No Yes Myotis lucifugus 69_2.0 Little brown bat 41 38
No Yes Pteropus vampyrus 69_1 Large flying fox 39 38
No Yes Sorex araneus 69_1 European shrew 23 23
No Yes Erinaceus europaeus 69 Western European hedgehog 22 21
No Yes Procavia capensis 69_1 Cape rock hyrax 34 33
No Yes Loxodonta africana 69_3 African savanna elephant 40 37
No Yes Echinops telfairi 69 Small Madagascar hedgehog 26 26
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 19
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 16 16
No Yes Macropus eugenii 69_1.0 Tammar wallaby 32 31
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 37 35
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 37 36
No Yes Ornithorhynchus anatinus 69_5 Platypus 28 28
No Yes Petromyzon marinus 69_7.0 Sea lamprey 16 16
No Yes Meleagris gallopavo 69_2 Turkey 33 31
No Yes Gallus gallus 69_2 Chicken 33 31
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 33 31
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 33 31
No Yes Anolis carolinensis 69_2.0 Green anole 39 37
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 37 34
No Yes Latimeria chalumnae 69_1 Coelacanth 34 33
No Yes Gadus morhua 69_1 Atlantic cod 52 49
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 56 54
No Yes Takifugu rubripes 69_4 Torafugu 63 59
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 61 56
No Yes Oryzias latipes 69_1 Japanese medaka 62 56
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 64 60
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 67 62
No Yes Danio rerio 69_9 Zebrafish 65 63
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 9 8
No Yes Caenorhabditis elegans 69_215 Roundworm 6 6
No Yes NCBI 2017_08 genome   22733 21607
No Yes STRING v9.0.5 (STRING)   1251 1175
No Yes Uniprot 2018_03 genome   11027 10407
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   192 179
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   197 197
No Yes TargetDB (Targets)   64 62
No Yes UniProt viral sequences (Viral)   8 8

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