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Viral glycoprotein ectodomain-like superfamily domain assignments
in
STRING v9.0.5

Network of domain occurrence in all genomes


Assignment details

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STRING v9.0.5 (STRING) has 37 significant domains in 36 proteins.

     

Sequence ID   Evalue   Region   Family  
135651.CBN06262   0.0000118   694-805   Glycoprotein B-like  
135651.CBN06711   0.0000141   369-435   Glycoprotein B-like  
135651.CBN15307   0.000000123   935-1012   Glycoprotein B-like  
135651.CBN19301   0.000000139   952-1023   Glycoprotein B-like  
135651.CBN22199   0.00000000497   743-854   Glycoprotein B-like  
281687.CJA00164   0.00000000225   359-459   Glycoprotein B-like  
281687.CJA03667   0.00000602   1013-1083   Glycoprotein B-like  
281687.CJA07018   0.0000126   677-772   Glycoprotein B-like  
281687.CJA17664   0.000000942   120-234   Glycoprotein B-like  
281687.CJA20449   0.000000000262   671-777   Glycoprotein B-like  
281687.CJA20551   0.000000107   860-929   Glycoprotein B-like  
281687.CJA20674   0.000000654   540-649   Glycoprotein B-like  
281687.CJA23045   0.00000575   456-522   Glycoprotein B-like  
281687.CJA23547   0.00000732   34-98   Glycoprotein B-like  
281687.CJA24087   0.00000000288   894-990   Glycoprotein B-like  
281687.CJA24352   0.00000471   4-70   Glycoprotein B-like  
281687.CJA25319   0.00000034   186-297   Glycoprotein B-like  
281687.CJA26018   0.00000732   34-98   Glycoprotein B-like  
31234.CRE03601   0.0000000154   168-286   Glycoprotein B-like  
31234.CRE05211   0.000000968   1159-1228   Glycoprotein B-like  
31234.CRE05815   0.00000314   761-847   Glycoprotein B-like  
31234.CRE06372   0.000000128   223-328   Glycoprotein B-like  
31234.CRE07402   0.000000523   763-867   Glycoprotein B-like  
31234.CRE08480   0.00000575   1140-1211   Glycoprotein B-like  
31234.CRE10709   0.000000366   789-908   Glycoprotein B-like  
31234.CRE13773   0.0000000863   107-182   Glycoprotein B-like  
31234.CRE15882   0.000000167   1211-1282   Glycoprotein B-like  
31234.CRE16387   0.000000018   737-839   Glycoprotein B-like  
31234.CRE22625   0.0000034   944-1030   Glycoprotein B-like  
31234.CRE22866   0.0000183   717-802   Glycoprotein B-like  
31234.CRE25872   0.000000288   1298-1372   Glycoprotein B-like  
31234.CRE26779   0.000000136   1213-1278   Glycoprotein B-like  
31234.CRE29046   0.000000471   1218-1322   Glycoprotein B-like  
31234.CRE29157   0.000000000418   744-846   Glycoprotein B-like  
31234.CRE31531   0.000000314   1114-1185   Glycoprotein B-like  
7159.AAEL007844-PA   1.73e-84   34-358   Spike glycoprotein-like  
  1.07e-74   412-701   Spike glycoprotein-like  
 
Weak hits:
10141.ENSCPOP00000015749   0.0392   99-157   Glycoprotein B-like  
10228.JGI32564   0.0262   70-128   Spike glycoprotein-like  
135651.CBN00103   0.0139   82-121   Spike glycoprotein-like  
135651.CBN01580   0.0994   216-262   Spike glycoprotein-like  
135651.CBN02024   0.0785   133-197,229-275   Glycoprotein B-like  
135651.CBN08140   0.0207   821-971   Glycoprotein B-like  
135651.CBN09040   0.00149   734-823   Glycoprotein B-like  
135651.CBN17054   0.000418   175-234   Glycoprotein B-like  
135651.CBN18717   0.0994   216-262   Spike glycoprotein-like  
164328.JGI96675   0.034   698-772   Glycoprotein B-like  
169963.lmo0117   0.0154   33-109   Glycoprotein B-like  
212717.CTC02314   0.0445   72-99   Spike glycoprotein-like  
237895.Q5CER3   0.0118   81-156   Spike glycoprotein-like  
262316.MAP2755   0.034   36-87   Glycoprotein B-like  
264199.stu0680   0.0837   512-610   Glycoprotein B-like  
265669.LMOf2365_0135   0.0068   33-109   Glycoprotein B-like  
266834.SM_b21599   0.0549   23-62   Glycoprotein B-like  
281687.CJA02100   0.00275   114-481   Glycoprotein B-like  
281687.CJA02123   0.00162   117-230   Glycoprotein B-like  
281687.CJA08507   0.068   66-121   Glycoprotein B-like  
281687.CJA10241   0.0314   192-248   Spike glycoprotein-like  
281687.CJA12410   0.00314   122-233   Glycoprotein B-like  
281687.CJA18596   0.000732   24-375   Glycoprotein B-like  
281687.CJA19196   0.0445   101-214   Glycoprotein B-like  
281687.CJA28204   0.0575   11-138   Spike glycoprotein-like  
298386.PBPRB0823   0.0549   77-161   Glycoprotein B-like  
299768.str0680   0.0183   2-98   Glycoprotein B-like  
31234.CRE03585   0.00732   2-68   Glycoprotein B-like  
31234.CRE09721   0.000549   1217-1280   Glycoprotein B-like  
31234.CRE11930   0.0288   291-364   Glycoprotein B-like  
31234.CRE12078   0.000863   1135-1198   Glycoprotein B-like  
31234.CRE13741   0.00246   1286-1350   Glycoprotein B-like  
31234.CRE16459   0.000654   68-133   Glycoprotein B-like  
31234.CRE18143   0.000549   1116-1181   Glycoprotein B-like  
31234.CRE19753   0.00136   907-972   Glycoprotein B-like  
31234.CRE21516   0.00034   473-540   Glycoprotein B-like  
31234.CRE23126   0.000152   208-275   Glycoprotein B-like  
31234.CRE28809   0.000523   1040-1103   Glycoprotein B-like  
31234.CRE30552   0.000732   4-67   Glycoprotein B-like  
315750.BPUM_3557   0.034   138-210   Glycoprotein B-like  
316057.RPD_0017   0.0392   90-127   Spike glycoprotein-like  
319224.Sputcn32_2472   0.0209   119-186   Glycoprotein B-like  
323259.Mhun_0980   0.00204   18-82   Spike glycoprotein-like  
323259.Mhun_2664   0.0209   47-82   Spike glycoprotein-like  
349521.HCH_03028   0.0628   189-217   Spike glycoprotein-like  
350058.Mvan_1020   0.034   249-309   Spike glycoprotein-like  
35128.JGI25199   0.0785   199-313   Glycoprotein B-like  
351745.Sputw3181_1536   0.0209   119-186   Glycoprotein B-like  
365044.Pnap_3659   0.0366   45-77   Spike glycoprotein-like  
386415.NT01CX_1851   0.0602   72-102   Spike glycoprotein-like  
395962.Cyan8802_4383   0.0178   28-71   Glycoprotein B-like  
399550.Smar_0753   0.0136   5-71   Spike glycoprotein-like  
413502.Ctu_22970   0.0445   50-90   Spike glycoprotein-like  
41431.PCC8801_4321   0.0173   28-71   Glycoprotein B-like  
416269.APL_0234   0.0732   26-97   Glycoprotein B-like  
434271.APJL_0239   0.0759   26-97   Glycoprotein B-like  
4929.A5DEQ3   0.0112   260-381   Spike glycoprotein-like  
5059.CADAFLAP00000675   0.0112   302-346   Spike glycoprotein-like  
5085.CADAFUAP00004985   0.0146   39-77   Glycoprotein B-like  
5141.NCU00975.1   0.0445   184-239   Spike glycoprotein-like  
515619.EUBREC_1064   0.00288   60-100   Spike glycoprotein-like  
537457.APP7_0236   0.0732   26-97   Glycoprotein B-like  
557598.LHK_00767   0.0994   10-40   Spike glycoprotein-like  
561231.Pecwa_0707   0.0178   116-158   Spike glycoprotein-like  
561231.Pecwa_1088   0.0732   66-108   Spike glycoprotein-like  
565034.BHWA1_00237   0.00654   153-200   Glycoprotein B-like  
5671.LinJ35.5060   0.0915   207-254   Glycoprotein B-like  
5691.Tb927.1.4060   0.034   30-77   Glycoprotein B-like  
5722.A2E1U2   0.0471   37-79   Glycoprotein B-like  
5833.PFL0510c-1   0.0994   314-403   Spike glycoprotein-like  
5874.Q4UHP0   0.0837   588-730   Glycoprotein B-like  
5911.XP_001013448   0.00131   315-385   Glycoprotein B-like  
59689.fgenesh1_pm.C_scaffold_9000018   0.000889   10-44   Spike glycoprotein-like  
59729.ENSTGUP00000016014   0.0785   167-244   Glycoprotein B-like  
6085.XP_002168943   0.0732   173-222   Glycoprotein B-like  
6182.Q5C5P7   0.0549   72-142   Glycoprotein B-like  
6238.CBG05276   0.0445   49-159   Glycoprotein B-like  
6238.CBG12895   0.0732   422-553   Glycoprotein B-like  
6238.CBG23662   0.0785   432-527   Glycoprotein B-like  
6238.CBG23765   0.0112   23-167   Glycoprotein B-like  
6238.CBG24593   0.0199   23-167   Glycoprotein B-like  
6238.CBG24837   0.0759   23-167   Glycoprotein B-like  
6238.CBG27927   0.0471   22-56   Glycoprotein B-like  
6238.CBG28122   0.00759   31-141   Glycoprotein B-like  
634178.Lm4b_00121   0.0068   33-109   Glycoprotein B-like  
67593.JGI143505   0.00915   1086-1160   Glycoprotein B-like  
6945.ISCW005545-PA   0.0497   107-162   Glycoprotein B-like  
7159.AAEL009052-PA   0.0549   11-135   Spike glycoprotein-like  
73239.Q7RQ82   0.0706   144-188   Spike glycoprotein-like  
7739.JGI123637   0.00314   615-694   Spike glycoprotein-like  
7739.JGI69916   0.0288   32-96   Glycoprotein B-like  
8090.ENSORLP00000025596   0.00471   73-128   Glycoprotein B-like  
85643.Tmz1t_1934   0.00246   44-77   Spike glycoprotein-like  
9031.ENSGALP00000027333   0.0994   197-240   Spike glycoprotein-like  
9685.ENSFCAP00000000135   0.0732   115-157   Spike glycoprotein-like  
9796.ENSECAP00000021888   0.034   19-136   Glycoprotein B-like  
9913.ENSBTAP00000042536   0.0837   96-168   Glycoprotein B-like  

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View all assignments containing a Viral glycoprotein ectodomain-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   12764 12764
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 1
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Caenorhabditis japonica   13 13
No Yes Caenorhabditis brenneri   10 10
No Yes Caenorhabditis remanei   17 17
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes NCBI 2017_08 genome   210 207
No Yes STRING v9.0.5 (STRING)   37 36
No Yes Uniprot 2018_03 genome   8742 8728
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   93 93
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   61 61
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   202 189
No Yes TargetDB (Targets)   3 3
No Yes UniProt viral sequences (Viral)   3323 3322

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