SUPERFAMILY 1.75 HMM library and genome assignments server

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SPOC domain-like superfamily domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   47336 47336
No Yes Homo sapiens 76_38 Human 15 15
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 7 7
No Yes Pongo abelii 76_2 Sumatran orangutan 5 5
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 6 6
No Yes Papio anubis 76 Olive baboon 6 6
No Yes Macaca mulatta 76_1 Rhesus monkey 10 10
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 20 19
No Yes Otolemur garnettii 76_3 Small-eared galago 5 5
No Yes Microcebus murinus 76_1 Gray mouse lemur 4 3
No Yes Rattus norvegicus 76_5.0 Norway rat 8 8
No Yes Mus musculus 76_38 House mouse 7 7
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 5 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 7 7
No Yes Cavia porcellus 76_3 Domestic guinea pig 5 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 5 5
No Yes Ochotona princeps 76 American pika 4 3
No Yes Tupaia belangeri 76 Northern tree shrew 5 5
No Yes Sus scrofa 76_10.2 Pig 6 6
No Yes Bos taurus 76_3.1 Cattle 7 7
No Yes Ovis aries 76_3.1 Sheep 6 6
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 7 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 5 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 6 6
No Yes Canis familiaris 76_3.1 Dog 8 8
No Yes Felis catus 76_6.2 Domestic cat 5 5
No Yes Equus caballus 76_2 Horse 6 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 76_1 Large flying fox 6 5
No Yes Sorex araneus 76_1 European shrew 6 4
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 7 7
No Yes Echinops telfairi 76 Small Madagascar hedgehog 6 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 5 3
No Yes Macropus eugenii 76_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 6 6
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 5 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 5 5
No Yes Saccoglossus kowalevskii v3.0   6 6
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 4 4
No Yes Gallus gallus 76_4 Chicken 5 5
No Yes Anas platyrhynchos 76_1.0 Mallard 5 5
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 5 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 5 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 7 7
No Yes Anolis carolinensis 76_2.0 Green anole 4 4
No Yes Xenopus laevis African clawed frog 8 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 6 6
No Yes Latimeria chalumnae 76_1 Coelacanth 7 7
No Yes Lepisosteus oculatus 76 Spotted gar 7 7
No Yes Gadus morhua 76_1 Atlantic cod 5 5
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 7 7
No Yes Takifugu rubripes 76_4 Torafugu 13 13
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 9 9
No Yes Oryzias latipes 76_1 Japanese medaka 9 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 7 7
No Yes Poecilia formosa 76 Amazon molly 7 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 8
No Yes Astyanax mexicanus 76 Mexican tetra 6 6
No Yes Danio rerio 76_9 Zebrafish 13 13
No Yes Oikopleura dioica   3 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 76 Vase tunicate 3 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 7 5
No Yes Adineta vaga   21 16
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 3 3
No Yes Lottia gigantea Owl limpet 5 4
No Yes Helobdella robusta   6 6
No Yes Capitella sp. I   5 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 4
No Yes Heliconius melpomene Postman butterfly 4 4
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 7 7
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 4
No Yes Linepithema humile v1.1 Argentine ant 4 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 4
No Yes Atta cephalotes v1.1   3 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 4
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   4 4
No Yes Drosophila pseudoobscura 2.13   4 4
No Yes Drosophila persimilis 1.3   4 4
No Yes Drosophila suzukii   5 5
No Yes Drosophila yakuba 1.3   4 4
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   4 4
No Yes Drosophila melanogaster 76_5 Fruit fly 12 12
No Yes Drosophila erecta 1.3   4 4
No Yes Drosophila ananassae 1.3   4 4
No Yes Drosophila virilis 1.2   4 4
No Yes Drosophila mojavensis 1.3   4 4
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 4
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 4
No Yes Tribolium castaneum 3.0 Red flour beetle 4 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 4 4
No Yes Acyrthosiphon pisum Pea aphid 7 7
No Yes Rhodnius prolixus 22   4 4
No Yes Daphnia pulex Common water flea 3 3
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 4 4
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 4
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla   4 4
No Yes Onchocerca volvulus 22   4 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   8 8
No Yes Caenorhabditis brenneri   5 5
No Yes Caenorhabditis remanei   4 4
No Yes Caenorhabditis elegans 76_235 Roundworm 16 16
No Yes Caenorhabditis briggsae 2   4 4
No Yes Trichinella spiralis 22   5 5
No Yes Hymenolepis microstoma   4 4
No Yes Echinococcus multilocularis   6 6
No Yes Echinococcus granulosus   6 6
No Yes Taenia solium Pork tapeworm 6 6
No Yes Schistosoma mansoni   7 7
No Yes Mnemiopsis leidyi Sea walnut 3 3
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   6 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Hydra vulgaris   5 5
No Yes Amphimedon queenslandica   6 6
No Yes Trichoplax adhaerens   4 4
No Yes Proterospongia sp. ATCC 50818   3 3
No Yes Monosiga brevicollis   3 3
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   2 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   2 2
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   2 2
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   2 2
No Yes Rhodotorula graminis WP1 v1.0   2 2
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   2 2
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   3 3
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   2 2
No Yes Hydnomerulius pinastri v2.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 2
No Yes Pisolithus microcarpus 441 v1.0   2 2
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   2 2
No Yes Pleurotus ostreatus Oyster mushroom 2 2
No Yes Amanita thiersii Skay4041 v1.0   2 2
No Yes Amanita muscaria Koide v1.0 Fly agaric 2 2
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Laccaria bicolor S238N-H82   2 2
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Punctularia strigosozonata v1.0   2 2
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   2 2
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   3 3
No Yes Wolfiporia cocos MD-104 SS10 v1.0   2 2
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   2 2
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   2 2
No Yes Tremella mesenterica Witches' butter 2 2
No Yes Daldinia eschscholzii EC12 v1.0   2 2
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   2 2
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   2 2
No Yes Chaetomium globosum CBS 148.51   2 2
No Yes Neurospora tetrasperma   2 2
No Yes Neurospora discreta FGSC 8579   2 2
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   2 2
No Yes Sclerotinia sclerotiorum   2 2
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   2 2
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   2 2
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora teres f. teres 22   2 2
No Yes Pyrenophora tritici-repentis   2 2
No Yes Stagonospora nodorum   2 2
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Paracoccidioides brasiliensis Pb18   2 2
No Yes Coccidioides posadasii RMSCC 3488   2 2
No Yes Coccidioides immitis RS   2 2
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   2 2
No Yes Microsporum canis CBS 113480   2 2
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   2 2
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   2 2
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Hansenula polymorpha v2.0   2 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   2 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   2 2
No Yes Candida dubliniensis CD36   2 2
No Yes Candida tropicalis MYA-3404   2 2
No Yes Candida parapsilosis   2 2
No Yes Candida albicans SC5314   2 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   2 2
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   2 2
No Yes Debaromyces hansenii   2 2
No Yes Wickerhamomyces anomalus   2 2
No Yes Pichia pastoris GS115   2 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   2 2
No Yes Vanderwaltozyma polyspora DSM 70294   2 2
No Yes Candida glabrata CBS138   2 2
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   2 2
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   3 3
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   3 3
No Yes Kluyveromyces lactis   2 2
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   2 2
No Yes Allomyces macrogynus ATCC 38327   3 3
No Yes Spizellomyces punctatus DAOM BR117   3 3
No Yes Dictyostelium discoideum   2 2
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   2 2
No Yes Entamoeba invadens 1.2   2 2
No Yes Entamoeba histolytica 1   2 2
No Yes Selaginella moellendorffii   4 4
No Yes Pinus taeda Loblolly pine 7 7
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 7 7
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 3
No Yes Gossypium raimondii v221   3 3
No Yes Citrus clementina v165   3 3
No Yes Citrus sinensis v154 Sweet orange 5 5
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183   2 2
No Yes Arabidopsis lyrata Lyrate rockcress 2 2
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 5 5
No Yes Cucumis sativus v122 Cucumber 4 4
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Prunus persica v139 Peach 2 2
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 3 3
No Yes Vitis vinifera Wine grape 3 3
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 3 3
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   9 9
No Yes Triticum urartu 22   2 2
No Yes Triticum aestivum 22 Bread wheat 7 7
No Yes Aegilops tauschii 22   2 2
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   3 3
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   3 3
No Yes Oryza nivara 22   6 6
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 4 3
No Yes Panicum virgatum v202 Switchgrass 5 5
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 5 5
No Yes Zea mays v181 Maize 4 4
No Yes Sorghum bicolor Sorghum 3 3
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 3 3
No Yes Amborella trichopoda 22   2 2
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   3 2
No Yes Volvox carteri v199   2 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   2 2
No Yes Ostreococcus lucimarinus CCE9901   2 2
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   2 2
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   2 2
No Yes Trypanosoma brucei TREU927 v4.1   2 2
No Yes Ectocarpus siliculosus   2 2
No Yes Aureococcus anophagefferens   3 3
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   2 2
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   2 2
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   5 5
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   3 3
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Naegleria gruberi   4 4
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Ilumatobacter coccineus   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Streptomyces coelicolor A3(2)   4 4
No Yes Streptomyces sp. PAMC26508   2 2
No Yes Streptomyces flavogriseus ATCC 33331   2 2
No Yes Streptomyces sp. SirexAA-E   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   3 3
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   2 2
No Yes Saccharopolyspora erythraea NRRL 2338   3 3
No Yes Amycolatopsis mediterranei U32   3 3
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium massiliense str. GO 06   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Kytococcus sedentarius DSM 20547   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Isoptericola variabilis 225   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridium cellulolyticum H10   1 1
No Yes Thermaerobacter marianensis DSM 12885   2 1
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum reducens MI-1   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Clostridium sp. BNL1100   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   2 2
No Yes Paenibacillus polymyxa M1   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Bacillus coagulans 2-6   1 1
No Yes Niastella koreensis GR20-10   2 2
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   2 2
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   1 1
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   2 2
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Azoarcus sp. BH72   1 1
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia eutropha JMP134   2 2
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   2 2
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax ebreus TPSY   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Advenella kashmirensis WT001   1 1
No Yes Bordetella petrii DSM 12804   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingobium chlorophenolicum L-1   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   2 2
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Starkeya novella DSM 506   2 2
No Yes Xanthobacter autotrophicus Py2   2 2
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Sinorhizobium fredii NGR234   4 4
No Yes Sinorhizobium medicae WSM419   3 3
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Genome sequence of Rhizobium sp. strain IRBG74   4 4
No Yes Rhizobium etli CIAT 652   6 6
No Yes Rhizobium leguminosarum bv. viciae 3841   4 4
No Yes Agrobacterium tumefaciens str. C58   3 3
No Yes Agrobacterium sp. H13-3   4 4
No Yes Agrobacterium vitis S4   2 2
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Mesorhizobium opportunistum WSM2075   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   3 3
No Yes Mesorhizobium loti MAFF303099   4 4
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   2 2
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   4 4
No Yes Bradyrhizobium japonicum USDA 110   5 5
No Yes Bradyrhizobium sp. ORS 278   2 2
No Yes Methylocystis sp. SC2   2 2
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 7 7
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 7 7
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 5
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 10 10
No Yes Cryptococcus neoformans var. grubii H99   2 2
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   2 2
No Yes Paracoccidioides brasiliensis Pb03   2 2
No Yes Coccidioides posadasii str. Silveira   2 2
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   2 2
No Yes Coccidioides immitis H538.4   2 2
No Yes Ajellomyces dermatitidis ER-3   2 2
No Yes Histoplasma capsulatum H143   2 2
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   2 2
No Yes Aspergillus fumigatus A1163   2 2
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   2 2
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   2 2
No Yes Saccharomyces cerevisiae YJM269   2 2
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   2 2
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   2 2
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   4 3
No Yes Batrachochytrium dendrobatidis JAM81   4 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 2
No Yes Hordeum vulgare 22 Domesticated barley 3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 3
No Yes Trypanosoma brucei Lister 427 v4.1   2 2
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Frankia sp. EuI1c   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   3 3
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis orientalis HCCB10007   3 3
No Yes Actinoplanes friuliensis DSM 7358   2 2
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   2 2
No Yes Paenibacillus mucilaginosus K02   2 2
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Bacillus coagulans 36D1   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Burkholderia sp. YI23   3 3
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   3 3
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Rhodobacter sphaeroides KD131   2 2
No Yes Rhodobacter sphaeroides ATCC 17025   2 2
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Sinorhizobium fredii USDA 257   4 4
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti 2011   3 3
No Yes Sinorhizobium meliloti GR4   4 4
No Yes Sinorhizobium meliloti Rm41   5 5
No Yes Sinorhizobium meliloti SM11   5 5
No Yes Sinorhizobium meliloti BL225C   4 4
No Yes Sinorhizobium meliloti 1021   5 5
No Yes Rhizobium etli CFN 42   4 4
No Yes Rhizobium etli bv. mimosae str. Mim1   6 6
No Yes Rhizobium tropici CIAT 899   3 3
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   4 4
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   6 6
No Yes Mesorhizobium australicum WSM2073   3 3
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   2 2
No Yes Rhodopseudomonas palustris HaA2   2 2
No Yes Rhodopseudomonas palustris BisB5   2 2
No Yes Rhodopseudomonas palustris BisB18   2 2
No Yes Rhodopseudomonas palustris CGA009   2 2
No Yes Bradyrhizobium sp. S23321   2 2
No Yes Bradyrhizobium sp. BTAi1   3 3
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   4 4
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   2 2
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 14 14
No Yes Homo sapiens (NCBI version) Human 6 6
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 5 5
No Yes Heliconius numata (Incomplete)   4 4
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 5 5
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 4 4
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Lotus japonicus (Early assembly)   4 4
No Yes Ricinus communis (Early assembly) Castor bean 2 2
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 3 3
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Homo sapiens 69_37 Human 6 6
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 6 6
No Yes Pongo abelii 69_2 Sumatran orangutan 5 5
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 5 5
No Yes Macaca mulatta 69_1 Rhesus monkey 7 7
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 13 12
No Yes Otolemur garnettii 69_3 Small-eared galago 5 5
No Yes Microcebus murinus 69_1 Gray mouse lemur 4 3
No Yes Rattus norvegicus 69_3.4 Norway rat 4 4
No Yes Mus musculus 69_38 House mouse 5 5
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 5 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 5 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 5 5
No Yes Ochotona princeps 69 American pika 4 3
No Yes Tupaia belangeri 69 Northern tree shrew 5 5
No Yes Sus scrofa 69_10.2 Pig 5 5
No Yes Bos taurus 69_3.1 Cattle 6 6
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 7 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 5 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 5 5
No Yes Canis familiaris 69_3.1 Dog 5 5
No Yes Felis catus 69 Domestic cat 8 6
No Yes Equus caballus 69_2 Horse 4 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 69_1 Large flying fox 6 5
No Yes Sorex araneus 69_1 European shrew 6 4
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 6 6
No Yes Echinops telfairi 69 Small Madagascar hedgehog 6 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 5 3
No Yes Macropus eugenii 69_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 5 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 4 4
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 5 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 5 5
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 6 6
No Yes Anolis carolinensis 69_2.0 Green anole 4 4
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 69_1 Coelacanth 5 5
No Yes Gadus morhua 69_1 Atlantic cod 5 5
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 7 7
No Yes Takifugu rubripes 69_4 Torafugu 6 6
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 7 7
No Yes Oryzias latipes 69_1 Japanese medaka 8 8
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 7 7
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 6 6
No Yes Danio rerio 69_9 Zebrafish 7 7
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 3 3
No Yes Drosophila melanogaster 69_5 Fruit fly 4 4
No Yes Caenorhabditis elegans 69_215 Roundworm 4 4
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes 2_050719S (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   10 10
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   13 13
No Yes Combined (meta-genome)   20 20
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   11 11
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   12 12
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   34 34
No Yes Dump top (Dump top) (meta-genome)   28 28
No Yes Endophytic microbiome from Rice (meta-genome)   7 7
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   20 20
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   31 30
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   17 17
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   29 29
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   22 22
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes Mouse Gut Community ob2 (meta-genome)   2 2
No Yes NCBI 2017_08 genome   28124 28115
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   21 21
No Yes Protozoadb 2010_08 (Protozoadb)   27 27
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   12 12
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   15 15
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   20 20
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   34 34
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   37 37
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   125 125
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   52 52
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   37 37
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   85 85
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   91 91
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   668 666
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   10 10
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   55 55
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   19 19
No Yes Uniprot 2018_03 genome   13125 13103
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   6 6
No Yes Global Ocean Sampling Expedition (GOS)   21 21
No Yes NCBI plasmid sequences (Plasmids)   78 78
No Yes NCBI viral sequences (Viral)   11 11
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   30 30
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   23 23
No Yes TargetDB (Targets)   92 92
No Yes UniProt viral sequences (Viral)   2 2

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