SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Plant invertase/pectin methylesterase inhibitor superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a Plant invertase/pectin methylesterase inhibitor domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   25833 25833
No Yes Selaginella moellendorffii   13 13
No Yes Pinus taeda Loblolly pine 90 82
No Yes Picea abies Norway spruce 57 53
No Yes Eucalyptus grandis v201 Rose gum 46 46
No Yes Theobroma cacao B97-61/B2 v1 Cacao 74 72
No Yes Gossypium raimondii v221   152 152
No Yes Citrus clementina v165   75 75
No Yes Citrus sinensis v154 Sweet orange 78 78
No Yes Thellungiella halophila v173   105 105
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 167 167
No Yes Capsella rubella v183   130 130
No Yes Arabidopsis lyrata Lyrate rockcress 133 132
No Yes Arabidopsis thaliana 10 Thale cress 128 125
No Yes Carica papaya Papaya 54 54
No Yes Medicago truncatula Barrel medic 171 171
No Yes Phaseolus vulgaris v186 French bean 105 104
No Yes Glycine max v109 Soybean 163 163
No Yes Cucumis sativus v122 Cucumber 62 62
No Yes Fragaria vesca Wild strawberry 84 82
No Yes Malus domestica v196 Apple 148 144
No Yes Prunus persica v139 Peach 70 70
No Yes Linum usitatissimum v200 Flax 162 160
No Yes Manihot esculenta v147 Cassava 100 100
No Yes Populus trichocarpa v156 Black cottonwood 121 118
No Yes Vitis vinifera Wine grape 21 21
No Yes Mimulus guttatus v140 Spotted monkey flower 115 115
No Yes Solanum lycopersicum v.2.3 Tomato 86 86
No Yes Solanum tuberosum Potato 114 113
No Yes Actinidia chinensis Hongyang   111 109
No Yes Aquilegia coerulea v195   63 63
No Yes Triticum urartu 22   85 85
No Yes Triticum aestivum 22 Bread wheat 95 95
No Yes Aegilops tauschii 22   95 94
No Yes Brachypodium distachyon Stiff brome 64 60
No Yes Oryza barthii 22 African wild rice 61 59
No Yes Oryza meridionalis 22   64 61
No Yes Oryza glumaepatula 22   72 69
No Yes Oryza glaberrima African rice 58 58
No Yes Oryza punctata 22   74 70
No Yes Oryza nivara 22   70 67
No Yes Oryza brachyantha 22 Malo sina 48 47
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 80 80
No Yes Oryza sativa v193 Rice 81 81
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 30 30
No Yes Panicum virgatum v202 Switchgrass 131 131
No Yes Setaria italica v164 Foxtail millet 67 67
No Yes Zea mays subsp. mays Maize 76 76
No Yes Zea mays v181 Maize 79 79
No Yes Sorghum bicolor Sorghum 73 73
No Yes Musa balbisiana Balbis banana 89 88
No Yes Musa acuminata 22 Wild Malaysian banana 58 58
No Yes Amborella trichopoda 22   40 40
No Yes Physcomitrella patens   12 12
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 71 70
No Yes Hordeum vulgare 22 Domesticated barley 68 68
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 71 70
No Yes Picea sitchensis (Incomplete) Sitka spruce 5 5
No Yes Lotus japonicus (Early assembly)   69 69
No Yes Malus x domestica (Duplicate) Apple 148 144
No Yes Ricinus communis (Early assembly) Castor bean 72 71
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   169 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 86 86
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 86 86
No Yes Phoenix dactylifera (Early draft) Date palm 13 13
No Yes Arabidopsis thaliana 10 Thale cress 126 123
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes NCBI 2017_08 genome   7844 7819
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   720 708
No Yes Uniprot 2018_03 genome   9281 9188
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   25 25
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   75 75
No Yes TargetDB (Targets)   63 62

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]