SUPERFAMILY 1.75 HMM library and genome assignments server

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Smp-1-like superfamily domain assignments
in
Hymenolepis microstoma

Network of domain occurrence in all genomes


Assignment details

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Hymenolepis microstoma has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
HmN_001006700.1   0.0000131   5-31   Smp-1-like  
 
Weak hits:
HmN_000012000.1   0.0471   12-55   Smp-1-like  
HmN_000236700.1   0.085   92-114   Smp-1-like  
HmN_000283800.1   0.00811   77-100   Smp-1-like  
HmN_000567700.1   0.0785   61-88   Smp-1-like  
HmN_000594800.1   0.00432   119-142   Smp-1-like  
HmN_000665200.1   0.068   17-38   Smp-1-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1723 1723
No Yes Hymenolepis microstoma   1 1
No Yes Leishmania mexicana 2.4   29 23
No Yes Leishmania major strain Friedlin   31 25
No Yes Leishmania infantum JPCM5 2.4   33 27
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   32 26
No Yes Trypanosoma vivax   17 14
No Yes Trypanosoma cruzi strain CL Brener   25 22
No Yes Trypanosoma congolense 2.4   21 18
No Yes Trypanosoma brucei gambiense v4.1   18 14
No Yes Trypanosoma brucei TREU927 v4.1   20 17
No Yes Trypanosoma brucei Lister 427 v4.1   20 17
No Yes NCBI 2017_08 genome   350 285
No Yes Protozoadb 2010_08 (Protozoadb)   172 139
No Yes STRING v9.0.5 (STRING)   52 43
No Yes Uniprot 2018_03 genome   637 520
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   51 33

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