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Smp-1-like superfamily domain assignments
in
Leishmania major strain Friedlin

Network of domain occurrence in all genomes


Assignment details

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Leishmania major strain Friedlin has 31 significant domains in 25 proteins.

     

Sequence ID   Evalue   Region   Family  
psu|LmjF04.0450   4.32e-41   134-254   Smp-1-like  
psu|LmjF14.0850   8.5e-42   3-113   Smp-1-like  
psu|LmjF17.0870   8.89e-38   333-444   Smp-1-like  
psu|LmjF20.1180   3.01e-40   326-439   Smp-1-like  
psu|LmjF20.1185   2.49e-40   172-285   Smp-1-like  
psu|LmjF20.1190   2.62e-41   19-137   Smp-1-like  
psu|LmjF20.1200   5.89e-31   24-147   Smp-1-like  
psu|LmjF20.1220   8.76e-32   14-126   Smp-1-like  
psu|LmjF20.1230   7.19e-37   12-129   Smp-1-like  
psu|LmjF20.1250   1.12e-33   111-229   Smp-1-like  
psu|LmjF20.1270   0.0000000000000051   93-183   Smp-1-like  
psu|LmjF20.1280   7.06e-37   9-127   Smp-1-like  
psu|LmjF20.1300   1.57e-39   8-120   Smp-1-like  
psu|LmjF20.1310   3.14e-49   6-128   Smp-1-like  
psu|LmjF25.1480   1.44e-32   6-126   Smp-1-like  
psu|LmjF25.1750   3.53e-37   6-130   Smp-1-like  
psu|LmjF31.0390   1.7e-33   183-291   Smp-1-like  
psu|LmjF31.0400   1.57e-30   180-304   Smp-1-like  
psu|LmjF31.0410   5.89e-26   20-138   Smp-1-like  
psu|LmjF31.0430   1.01e-33   238-353   Smp-1-like  
psu|LmjF31.0440   3.53e-32   62-177   Smp-1-like  
psu|LmjF31.0460   2.62e-26   43-160   Smp-1-like  
psu|LmjF34.0190   2.62e-34   6-126   Smp-1-like  
  3.66e-34   123-248   Smp-1-like  
  1.7e-32   248-367   Smp-1-like  
  1.83e-31   368-482   Smp-1-like  
psu|LmjF34.0200   6.67e-37   120-242   Smp-1-like  
  1.07e-31   397-515   Smp-1-like  
  3.01e-30   245-364   Smp-1-like  
  3.66e-29   11-122   Smp-1-like  
psu|LmjF36.3180   1.28e-34   1285-1398   Smp-1-like  
 
Weak hits:
psu|LmjF20.1260   0.0183   511-549   Smp-1-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1723 1723
No Yes Hymenolepis microstoma   1 1
No Yes Leishmania mexicana 2.4   29 23
No Yes Leishmania major strain Friedlin   31 25
No Yes Leishmania infantum JPCM5 2.4   33 27
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   32 26
No Yes Trypanosoma vivax   17 14
No Yes Trypanosoma cruzi strain CL Brener   25 22
No Yes Trypanosoma congolense 2.4   21 18
No Yes Trypanosoma brucei gambiense v4.1   18 14
No Yes Trypanosoma brucei TREU927 v4.1   20 17
No Yes Trypanosoma brucei Lister 427 v4.1   20 17
No Yes NCBI 2017_08 genome   350 285
No Yes Protozoadb 2010_08 (Protozoadb)   172 139
No Yes STRING v9.0.5 (STRING)   52 43
No Yes Uniprot 2018_03 genome   637 520
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   51 33

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