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DNA-binding pseudobarrel domain superfamily domain assignments
in
Malus domestica v196

Assignment details

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Malus domestica v196 has 188 significant domains in 146 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000123407|PACid:22657458   3.14e-23   227-327   B3 DNA binding domain  
  5.1e-23   8-106   B3 DNA binding domain  
  5.69e-22   464-565   B3 DNA binding domain  
MDP0000123466|PACid:22652651   4.32e-34   144-279   B3 DNA binding domain  
MDP0000123473|PACid:22645384   0.0000000000122   109-224   B3 DNA binding domain  
MDP0000123668|PACid:22668503   0.000000000126   144-181   B3 DNA binding domain  
MDP0000124774|PACid:22657498   3.73e-23   8-106   B3 DNA binding domain  
  0.0000000000129   227-300   B3 DNA binding domain  
MDP0000125949|PACid:22671191   4.32e-19   17-114   B3 DNA binding domain  
  4.12e-18   228-333   B3 DNA binding domain  
  1.26e-17   420-502   B3 DNA binding domain  
  0.00000000000000294   613-696   B3 DNA binding domain  
MDP0000126738|PACid:22651879   1.29e-19   15-113   B3 DNA binding domain  
  0.0000112   225-257   B3 DNA binding domain  
MDP0000127640|PACid:22634716   8.5e-21   419-522   B3 DNA binding domain  
MDP0000128295|PACid:22625136   0.00000000196   106-156   B3 DNA binding domain  
MDP0000128924|PACid:22664801   1.44e-28   211-322   B3 DNA binding domain  
MDP0000131481|PACid:22630798   2.62e-29   93-207   B3 DNA binding domain  
MDP0000134824|PACid:22673229   2.75e-41   124-265   B3 DNA binding domain  
MDP0000138163|PACid:22622470   8.24e-30   118-226   B3 DNA binding domain  
MDP0000138853|PACid:22674896   1.83e-33   142-243   B3 DNA binding domain  
MDP0000138860|PACid:22643076   2.49e-31   144-244   B3 DNA binding domain  
MDP0000139073|PACid:22644421   4.71e-40   104-245   B3 DNA binding domain  
MDP0000143207|PACid:22656792   0.00000161   111-216   B3 DNA binding domain  
MDP0000143319|PACid:22673778   0.0000000000785   5-74   B3 DNA binding domain  
  0.00171   139-170   B3 DNA binding domain  
MDP0000143749|PACid:22644960   5.36e-47   127-269   B3 DNA binding domain  
MDP0000143918|PACid:22630013   0.00000000255   42-82   B3 DNA binding domain  
MDP0000146397|PACid:22625573   1.06e-21   8-108   B3 DNA binding domain  
MDP0000152089|PACid:22663193   0.000000000000159   119-208   B3 DNA binding domain  
MDP0000153538|PACid:22660264   1.16e-48   117-261   B3 DNA binding domain  
MDP0000153589|PACid:22644982   1.53e-27   162-265   B3 DNA binding domain  
MDP0000155544|PACid:22633491   9.02e-22   63-161   B3 DNA binding domain  
MDP0000160647|PACid:22627261   0.00000000000196   194-261   B3 DNA binding domain  
MDP0000161022|PACid:22675604   1.41e-23   142-238   B3 DNA binding domain  
  3.34e-20   475-575   B3 DNA binding domain  
  0.0000334   29-71   B3 DNA binding domain  
MDP0000162363|PACid:22677783   3.14e-26   5-101   B3 DNA binding domain  
MDP0000165802|PACid:22635978   1.2e-24   222-317   B3 DNA binding domain  
MDP0000166580|PACid:22637283   0.0000000000000018   797-878   B3 DNA binding domain  
MDP0000173151|PACid:22632672   2.88e-42   140-252   B3 DNA binding domain  
MDP0000176581|PACid:22669985   1.02e-20   52-143   B3 DNA binding domain  
  0.00000000000314   255-322   B3 DNA binding domain  
  0.00000000000373   324-406   B3 DNA binding domain  
MDP0000179251|PACid:22658518   9.61e-17   16-113   B3 DNA binding domain  
  0.000000000000412   157-256   B3 DNA binding domain  
MDP0000179650|PACid:22675203   2.22e-42   139-252   B3 DNA binding domain  
MDP0000185253|PACid:22621202   1.09e-43   124-265   B3 DNA binding domain  
MDP0000185981|PACid:22654058   2.16e-21   50-151   B3 DNA binding domain  
MDP0000187657|PACid:22625109   0.000000000051   124-196   B3 DNA binding domain  
MDP0000189426|PACid:22643793   4.32e-20   83-185   B3 DNA binding domain  
  5.89e-18   287-381   B3 DNA binding domain  
MDP0000192438|PACid:22632653   1.45e-22   15-115   B3 DNA binding domain  
  1.04e-20   213-312   B3 DNA binding domain  
MDP0000194603|PACid:22651584   1.05e-40   119-256   B3 DNA binding domain  
MDP0000197534|PACid:22639927   5.1e-17   154-256   B3 DNA binding domain  
MDP0000199365|PACid:22642971   6.28e-17   48-165   B3 DNA binding domain  
MDP0000200376|PACid:22644424   1.8e-17   100-191   B3 DNA binding domain  
MDP0000201845|PACid:22662296   0.000000000275   114-180   B3 DNA binding domain  
MDP0000204389|PACid:22666456   0.00000000000000314   41-135   B3 DNA binding domain  
MDP0000207722|PACid:22671640   5.76e-27   252-347   B3 DNA binding domain  
MDP0000211459|PACid:22629500   4.32e-47   128-269   B3 DNA binding domain  
MDP0000212063|PACid:22630334   0.00000114   337-440   B3 DNA binding domain  
MDP0000212684|PACid:22647103   3.53e-19   183-285   B3 DNA binding domain  
  1.26e-18   4-103   B3 DNA binding domain  
MDP0000214352|PACid:22681236   2.35e-31   144-244   B3 DNA binding domain  
MDP0000214729|PACid:22665914   3.53e-19   183-285   B3 DNA binding domain  
  1.26e-18   4-103   B3 DNA binding domain  
MDP0000215770|PACid:22651835   0.000000000379   15-54   B3 DNA binding domain  
MDP0000221322|PACid:22644524   2.49e-29   123-237   B3 DNA binding domain  
MDP0000223137|PACid:22662915   1.96e-28   165-270   B3 DNA binding domain  
MDP0000225889|PACid:22683127   0.00000000275   628-695   B3 DNA binding domain  
MDP0000225980|PACid:22683343   6.54e-44   156-277   B3 DNA binding domain  
MDP0000226894|PACid:22677142   3.73e-23   16-115   B3 DNA binding domain  
MDP0000227080|PACid:22645787   4.71e-23   16-115   B3 DNA binding domain  
  2.35e-18   185-264   B3 DNA binding domain  
MDP0000229344|PACid:22665895   9.81e-21   365-467   B3 DNA binding domain  
MDP0000229742|PACid:22674723   1.96e-31   101-205   B3 DNA binding domain  
MDP0000232116|PACid:22646641   6.28e-29   112-242   B3 DNA binding domain  
MDP0000232417|PACid:22660261   1.7e-48   112-256   B3 DNA binding domain  
MDP0000233293|PACid:22671029   0.00000255   150-251   B3 DNA binding domain  
MDP0000233653|PACid:22674667   0.0000000445   273-342   B3 DNA binding domain  
MDP0000236656|PACid:22666211   1.65e-21   116-204   B3 DNA binding domain  
MDP0000236750|PACid:22623596   1.86e-22   437-535   B3 DNA binding domain  
  1.96e-21   622-721   B3 DNA binding domain  
  5.1e-16   27-119   B3 DNA binding domain  
  0.0000000000000196   168-264   B3 DNA binding domain  
  0.000000000000129   780-876   B3 DNA binding domain  
  0.0000255   339-397   B3 DNA binding domain  
MDP0000237202|PACid:22655382   1.14e-18   59-136   B3 DNA binding domain  
MDP0000237846|PACid:22646691   6.08e-16   88-182   B3 DNA binding domain  
MDP0000238744|PACid:22674921   5.23e-24   294-393   B3 DNA binding domain  
  7.06e-23   3-97   B3 DNA binding domain  
MDP0000240942|PACid:22638874   0.00000000000294   107-176   B3 DNA binding domain  
MDP0000241245|PACid:22642523   4.71e-21   182-276   B3 DNA binding domain  
  0.0122   40-81   B3 DNA binding domain  
MDP0000241386|PACid:22625419   3.73e-18   72-164   B3 DNA binding domain  
MDP0000242456|PACid:22650200   2.55e-18   496-582   B3 DNA binding domain  
  0.00000000186   657-757   B3 DNA binding domain  
MDP0000247573|PACid:22627980   0.000000314   141-244   B3 DNA binding domain  
MDP0000247623|PACid:22644692   3.66e-29   16-121   B3 DNA binding domain  
MDP0000249417|PACid:22680044   4.32e-22   127-224   B3 DNA binding domain  
MDP0000251244|PACid:22665628   0.00000000000000275   506-577   B3 DNA binding domain  
MDP0000252726|PACid:22647790   1.26e-17   506-601   B3 DNA binding domain  
  0.0000000000000116   698-799   B3 DNA binding domain  
MDP0000252727|PACid:22647791   1.18e-17   161-260   B3 DNA binding domain  
  0.000000000000334   8-85   B3 DNA binding domain  
MDP0000256621|PACid:22648903   1.96e-30   215-353   B3 DNA binding domain  
MDP0000257606|PACid:22645914   8.44e-16   775-856   B3 DNA binding domain  
  0.00000000000000196   584-689   B3 DNA binding domain  
  0.000000000549   936-994   B3 DNA binding domain  
MDP0000258032|PACid:22620805   1.7e-40   157-289   B3 DNA binding domain  
MDP0000258417|PACid:22673144   4.32e-23   116-213   B3 DNA binding domain  
MDP0000258854|PACid:22678384   0.000000000053   205-292   B3 DNA binding domain  
MDP0000259062|PACid:22632961   4.45e-25   255-360   B3 DNA binding domain  
MDP0000260382|PACid:22663192   0.0000000255   60-135   B3 DNA binding domain  
MDP0000263654|PACid:22620434   3.92e-17   499-585   B3 DNA binding domain  
MDP0000266051|PACid:22641431   4.9e-16   474-554   B3 DNA binding domain  
  0.0000000000000196   213-306   B3 DNA binding domain  
  0.000000000334   631-694   B3 DNA binding domain  
  0.0275   328-375   B3 DNA binding domain  
MDP0000267885|PACid:22661160   6.02e-21   240-343   B3 DNA binding domain  
MDP0000268306|PACid:22630740   1.31e-48   112-256   B3 DNA binding domain  
MDP0000268649|PACid:22647350   0.000000000000687   125-198   B3 DNA binding domain  
MDP0000271785|PACid:22638372   2.75e-16   33-119   B3 DNA binding domain  
  0.00000000000000255   135-233   B3 DNA binding domain  
MDP0000274788|PACid:22660795   0.0000000000000157   331-415   B3 DNA binding domain  
MDP0000280317|PACid:22657374   0.000000131   229-345   B3 DNA binding domain  
MDP0000283274|PACid:22663974   2.16e-18   127-217   B3 DNA binding domain  
MDP0000288808|PACid:22628543   9.55e-30   106-215   B3 DNA binding domain  
MDP0000289385|PACid:22645688   0.00000000000000726   41-135   B3 DNA binding domain  
MDP0000291591|PACid:22681743   3.34e-24   10-109   B3 DNA binding domain  
  0.000000000255   194-279   B3 DNA binding domain  
MDP0000291592|PACid:22681744   4.71e-18   3-75   B3 DNA binding domain  
  0.000000000000235   125-218   B3 DNA binding domain  
MDP0000292968|PACid:22636752   4.9e-16   149-244   B3 DNA binding domain  
MDP0000294251|PACid:22639202   1.44e-41   432-542   B3 DNA binding domain  
MDP0000298218|PACid:22631518   3.34e-21   8-108   B3 DNA binding domain  
  1.96e-20   185-284   B3 DNA binding domain  
MDP0000302532|PACid:22624442   2.35e-19   16-114   B3 DNA binding domain  
  3.73e-18   187-293   B3 DNA binding domain  
MDP0000304769|PACid:22644689   5.1e-20   293-392   B3 DNA binding domain  
MDP0000305249|PACid:22629814   0.00000294   150-251   B3 DNA binding domain  
MDP0000309680|PACid:22638461   4.05e-23   640-736   B3 DNA binding domain  
MDP0000309784|PACid:22654675   3.53e-20   382-481   B3 DNA binding domain  
  5.3e-20   1-90   B3 DNA binding domain  
MDP0000309874|PACid:22623281   0.00000000001   986-1075   B3 DNA binding domain  
  0.000000000124   1169-1243   B3 DNA binding domain  
MDP0000310875|PACid:22641004   4.84e-40   156-288   B3 DNA binding domain  
MDP0000312598|PACid:22676419   1.63e-22   1072-1170   B3 DNA binding domain  
  6.08e-18   1337-1419   B3 DNA binding domain  
MDP0000314333|PACid:22663787   8.24e-24   121-220   B3 DNA binding domain  
MDP0000314836|PACid:22664815   7.85e-17   16-113   B3 DNA binding domain  
  0.0000000000000153   116-229   B3 DNA binding domain  
MDP0000316701|PACid:22677141   8.04e-23   16-114   B3 DNA binding domain  
  8.63e-22   201-300   B3 DNA binding domain  
  9.22e-16   359-456   B3 DNA binding domain  
MDP0000319957|PACid:22645199   1.31e-48   234-378   B3 DNA binding domain  
MDP0000320006|PACid:22667113   2.55e-20   483-575   B3 DNA binding domain  
MDP0000321569|PACid:22635836   4.32e-27   162-264   B3 DNA binding domain  
MDP0000382202|PACid:22682839   0.0000942   187-305   B3 DNA binding domain  
MDP0000393956|PACid:22650070   4.32e-16   54-168   B3 DNA binding domain  
MDP0000412781|PACid:22651617   3.14e-44   156-277   B3 DNA binding domain  
MDP0000485280|PACid:22659457   9.68e-28   171-266   B3 DNA binding domain  
MDP0000490521|PACid:22639541   1.18e-16   48-165   B3 DNA binding domain  
MDP0000515096|PACid:22639161   6.28e-21   78-173   B3 DNA binding domain  
MDP0000526584|PACid:22649377   3.73e-25   208-303   B3 DNA binding domain  
MDP0000534780|PACid:22663807   2.94e-25   167-262   B3 DNA binding domain  
MDP0000540442|PACid:22682667   0.00000000883   57-167   B3 DNA binding domain  
MDP0000549056|PACid:22637942   1.1e-22   272-375   B3 DNA binding domain  
MDP0000550049|PACid:22646916   1.19e-38   117-217   B3 DNA binding domain  
MDP0000555456|PACid:22659471   5.62e-25   292-392   B3 DNA binding domain  
  3.34e-22   4-97   B3 DNA binding domain  
MDP0000566907|PACid:22652228   0.000000863   184-285   B3 DNA binding domain  
MDP0000573054|PACid:22624774   0.000000000135   2-60   B3 DNA binding domain  
MDP0000627043|PACid:22674813   0.00000000000451   41-156   B3 DNA binding domain  
MDP0000652415|PACid:22653420   0.0000000000000167   145-249   B3 DNA binding domain  
MDP0000685403|PACid:22642568   0.0000000000000012   319-436   B3 DNA binding domain  
MDP0000750392|PACid:22633787   1.18e-28   252-362   B3 DNA binding domain  
MDP0000766961|PACid:22642958   0.00000000432   42-101   B3 DNA binding domain  
MDP0000777125|PACid:22671632   0.0000000549   141-242   B3 DNA binding domain  
MDP0000794899|PACid:22625108   0.000000000255   72-150   B3 DNA binding domain  
MDP0000795789|PACid:22682846   0.00000000687   139-243   B3 DNA binding domain  
MDP0000819543|PACid:22662298   1.96e-21   100-198   B3 DNA binding domain  
MDP0000825602|PACid:22674856   1.24e-16   25-120   B3 DNA binding domain  
MDP0000876321|PACid:22663258   5.1e-44   116-255   B3 DNA binding domain  
MDP0000886637|PACid:22641953   4.71e-43   115-254   B3 DNA binding domain  
MDP0000912733|PACid:22637933   0.000000000379   15-54   B3 DNA binding domain  
MDP0000929655|PACid:22661337   1.96e-43   58-198   B3 DNA binding domain  
MDP0000939633|PACid:22667205   4.97e-30   205-319   B3 DNA binding domain  
MDP0000945267|PACid:22621253   8.37e-29   159-260   B3 DNA binding domain  
 
Weak hits:
MDP0000121242|PACid:22676043   0.018   75-100   B3 DNA binding domain  
MDP0000135105|PACid:22644644   0.049   134-157   B3 DNA binding domain  
MDP0000174905|PACid:22667024   0.0942   78-121   B3 DNA binding domain  
MDP0000181381|PACid:22662070   0.000357   290-340   B3 DNA binding domain  
MDP0000253740|PACid:22672932   0.0432   41-68   B3 DNA binding domain  
MDP0000259849|PACid:22641186   0.000628   530-631   B3 DNA binding domain  
MDP0000272545|PACid:22624278   0.0302   170-213   B3 DNA binding domain  
MDP0000277889|PACid:22667869   0.0108   3-30   B3 DNA binding domain  
MDP0000289153|PACid:22645153   0.00051   178-248   B3 DNA binding domain  
MDP0000294016|PACid:22638766   0.0824   1-45   B3 DNA binding domain  
MDP0000299953|PACid:22634985   0.000981   343-439   B3 DNA binding domain  
MDP0000309940|PACid:22638976   0.0902   481-545   B3 DNA binding domain  
MDP0000387755|PACid:22651907   0.0212   62-93   B3 DNA binding domain  
MDP0000433879|PACid:22627753   0.0192   3-30   B3 DNA binding domain  
MDP0000628424|PACid:22637470   0.0151   3-30   B3 DNA binding domain  
MDP0000895493|PACid:22673094   0.000235   174-277   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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