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DNA-binding pseudobarrel domain superfamily domain assignments
in
Zea mays v181

Assignment details

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Zea mays v181 has 171 significant domains in 153 proteins.

     

Sequence ID   Evalue   Region   Family  
AC193767.3_FGT003|PACid:20874468   2.09e-20   113-218   B3 DNA binding domain  
AC200117.3_FGT004|PACid:20856591   0.000000000628   178-250   B3 DNA binding domain  
AC207656.3_FGT002|PACid:20877845   7.06e-29   109-216   B3 DNA binding domain  
AC216872.3_FGT002|PACid:20855519   0.0000000116   81-114   B3 DNA binding domain  
GRMZM2G001048_T01|PACid:20860088   2.55e-22   388-488   B3 DNA binding domain  
  2.94e-16   98-195   B3 DNA binding domain  
GRMZM2G001048_T02|PACid:20860089   2.16e-16   98-195   B3 DNA binding domain  
GRMZM2G005284_T01|PACid:20875836   5.23e-23   137-240   B3 DNA binding domain  
GRMZM2G006042_T01|PACid:20874354   4.02e-41   144-276   B3 DNA binding domain  
GRMZM2G006042_T02|PACid:20874355   4.02e-41   144-276   B3 DNA binding domain  
GRMZM2G006042_T03|PACid:20874353   4.12e-41   144-276   B3 DNA binding domain  
GRMZM2G008356_T01|PACid:20834311   1.44e-19   453-555   B3 DNA binding domain  
GRMZM2G017187_T01|PACid:20846016   6.15e-45   110-254   B3 DNA binding domain  
GRMZM2G017187_T02|PACid:20846015   3.53e-44   110-254   B3 DNA binding domain  
GRMZM2G018336_T01|PACid:20879687   6.54e-30   51-149   B3 DNA binding domain  
GRMZM2G018485_T01|PACid:20872720   1.44e-28   84-175   B3 DNA binding domain  
GRMZM2G019956_T01|PACid:20877007   5.23e-18   241-345   B3 DNA binding domain  
  0.00000000000000111   49-145   B3 DNA binding domain  
GRMZM2G023813_T01|PACid:20874566   5.23e-21   112-217   B3 DNA binding domain  
GRMZM2G024948_T01|PACid:20878786   2.75e-29   98-207   B3 DNA binding domain  
GRMZM2G027253_T01|PACid:20821941   3.66e-28   24-132   B3 DNA binding domain  
GRMZM2G028794_T01|PACid:20836925   4.9e-22   132-229   B3 DNA binding domain  
GRMZM2G028980_T01|PACid:20859406   1.31e-48   119-263   B3 DNA binding domain  
GRMZM2G030710_T01|PACid:20819732   3.01e-43   158-278   B3 DNA binding domain  
GRMZM2G034840_T01|PACid:20842461   3.79e-42   134-272   B3 DNA binding domain  
GRMZM2G034840_T02|PACid:20842460   1.57e-44   134-273   B3 DNA binding domain  
GRMZM2G035405_T02|PACid:20878301   3.79e-21   2-89   B3 DNA binding domain  
GRMZM2G035701_T01|PACid:20851647   3.14e-20   73-169   B3 DNA binding domain  
GRMZM2G051795_T01|PACid:20871155   0.0000000000216   190-300   B3 DNA binding domain  
GRMZM2G056120_T01|PACid:20827202   2.09e-44   112-266   B3 DNA binding domain  
GRMZM2G059939_T01|PACid:20819956   0.0000000235   204-238   B3 DNA binding domain  
GRMZM2G059939_T02|PACid:20819955   4.71e-29   204-317   B3 DNA binding domain  
GRMZM2G065478_T01|PACid:20870948   0.00000000000000412   10-101   B3 DNA binding domain  
GRMZM2G065496_T02|PACid:20869539   1.96e-20   22-122   B3 DNA binding domain  
GRMZM2G065496_T03|PACid:20869540   1.96e-20   22-122   B3 DNA binding domain  
GRMZM2G065496_T04|PACid:20869537   3.73e-20   31-131   B3 DNA binding domain  
  9.81e-16   252-356   B3 DNA binding domain  
GRMZM2G065496_T05|PACid:20869538   2.16e-20   31-131   B3 DNA binding domain  
GRMZM2G065538_T01|PACid:20854430   6.54e-30   51-149   B3 DNA binding domain  
GRMZM2G073750_T01|PACid:20830415   4.32e-47   117-258   B3 DNA binding domain  
GRMZM2G073750_T02|PACid:20830416   4.32e-47   117-258   B3 DNA binding domain  
GRMZM2G073750_T03|PACid:20830417   3.53e-47   117-258   B3 DNA binding domain  
GRMZM2G078274_T01|PACid:20847254   2.49e-48   118-262   B3 DNA binding domain  
GRMZM2G078274_T03|PACid:20847255   2.35e-48   118-262   B3 DNA binding domain  
GRMZM2G081158_T01|PACid:20868217   2.09e-47   117-258   B3 DNA binding domain  
GRMZM2G081406_T01|PACid:20861329   4.05e-29   119-227   B3 DNA binding domain  
GRMZM2G082227_T01|PACid:20863734   1.18e-28   35-140   B3 DNA binding domain  
GRMZM2G084173_T01|PACid:20822357   0.00000000255   64-156   B3 DNA binding domain  
GRMZM2G086949_T01|PACid:20872859   6.02e-41   133-285   B3 DNA binding domain  
GRMZM2G088413_T01|PACid:20864520   2.35e-22   24-124   B3 DNA binding domain  
  9.42e-17   226-331   B3 DNA binding domain  
GRMZM2G088427_T01|PACid:20870033   2.75e-22   22-120   B3 DNA binding domain  
  1.75e-17   229-330   B3 DNA binding domain  
GRMZM2G098063_T01|PACid:20863209   3.73e-20   24-125   B3 DNA binding domain  
  9.22e-19   219-322   B3 DNA binding domain  
GRMZM2G098443_T01|PACid:20851058   1.03e-28   37-127   B3 DNA binding domain  
GRMZM2G102059_T01|PACid:20843623   3.66e-29   91-185   B3 DNA binding domain  
GRMZM2G102845_T01|PACid:20876197   8.76e-40   137-277   B3 DNA binding domain  
GRMZM2G102938_T01|PACid:20820229   0.0000000000122   76-140   B3 DNA binding domain  
GRMZM2G102938_T02|PACid:20820231   9.02e-18   31-114   B3 DNA binding domain  
GRMZM2G102938_T03|PACid:20820230   0.0000000000122   76-140   B3 DNA binding domain  
GRMZM2G102938_T04|PACid:20820232   9.02e-18   31-114   B3 DNA binding domain  
GRMZM2G102938_T05|PACid:20820233   9.02e-18   31-114   B3 DNA binding domain  
GRMZM2G106673_T01|PACid:20856931   3.34e-23   66-164   B3 DNA binding domain  
GRMZM2G106673_T02|PACid:20856929   9.02e-23   146-244   B3 DNA binding domain  
GRMZM2G106673_T03|PACid:20856933   1.37e-20   66-156   B3 DNA binding domain  
GRMZM2G106673_T04|PACid:20856932   3.34e-23   66-164   B3 DNA binding domain  
GRMZM2G106673_T05|PACid:20856934   1.96e-23   39-137   B3 DNA binding domain  
GRMZM2G106673_T06|PACid:20856930   7.46e-23   127-225   B3 DNA binding domain  
GRMZM2G109480_T01|PACid:20862896   7.65e-23   39-136   B3 DNA binding domain  
GRMZM2G109480_T02|PACid:20862894   2.75e-22   132-229   B3 DNA binding domain  
GRMZM2G109480_T03|PACid:20862895   1.39e-20   132-225   B3 DNA binding domain  
GRMZM2G109879_T01|PACid:20848462   1.16e-16   140-238   B3 DNA binding domain  
  6.08e-16   300-394   B3 DNA binding domain  
  0.00000000000000194   455-550   B3 DNA binding domain  
  0.0000000000000608   18-114   B3 DNA binding domain  
GRMZM2G109879_T02|PACid:20848461   1.28e-16   140-238   B3 DNA binding domain  
  6.67e-16   300-394   B3 DNA binding domain  
  0.0000000000000667   18-114   B3 DNA binding domain  
GRMZM2G111123_T01|PACid:20829363   8.24e-22   148-245   B3 DNA binding domain  
GRMZM2G111123_T02|PACid:20829364   8.24e-22   148-245   B3 DNA binding domain  
GRMZM2G116557_T01|PACid:20852738   1.15e-39   121-256   B3 DNA binding domain  
GRMZM2G116557_T02|PACid:20852735   1.31e-39   121-256   B3 DNA binding domain  
GRMZM2G116557_T03|PACid:20852737   1.31e-39   121-256   B3 DNA binding domain  
GRMZM2G116557_T04|PACid:20852736   1.31e-39   121-256   B3 DNA binding domain  
GRMZM2G122614_T01|PACid:20847876   1.44e-27   52-159   B3 DNA binding domain  
GRMZM2G123461_T01|PACid:20866241   9.42e-18   18-120   B3 DNA binding domain  
  0.0000000000412   199-268   B3 DNA binding domain  
GRMZM2G125095_T01|PACid:20864758   2.22e-30   27-140   B3 DNA binding domain  
GRMZM2G125596_T01|PACid:20858977   0.0000000000000157   261-351   B3 DNA binding domain  
GRMZM2G126194_T01|PACid:20875816   5.49e-18   40-137   B3 DNA binding domain  
GRMZM2G126194_T02|PACid:20875817   0.0000000000000961   19-82   B3 DNA binding domain  
GRMZM2G133398_T02|PACid:20827746   1.44e-19   516-611   B3 DNA binding domain  
GRMZM2G133398_T03|PACid:20827745   3.01e-22   516-612   B3 DNA binding domain  
GRMZM2G137413_T01|PACid:20861070   6.8e-43   113-251   B3 DNA binding domain  
GRMZM2G142999_T01|PACid:20839331   2.09e-30   29-147   B3 DNA binding domain  
GRMZM2G149940_T01|PACid:20842517   2.35e-17   302-400   B3 DNA binding domain  
GRMZM2G149940_T02|PACid:20842516   2.35e-17   312-410   B3 DNA binding domain  
GRMZM2G153233_T01|PACid:20870414   6.41e-29   111-220   B3 DNA binding domain  
GRMZM2G153233_T02|PACid:20870415   2.09e-29   111-220   B3 DNA binding domain  
GRMZM2G158162_T01|PACid:20835697   3.01e-21   367-470   B3 DNA binding domain  
GRMZM2G158162_T02|PACid:20835698   3.01e-21   367-470   B3 DNA binding domain  
GRMZM2G158162_T03|PACid:20835699   3.01e-21   367-470   B3 DNA binding domain  
GRMZM2G159399_T01|PACid:20879005   3.01e-28   113-222   B3 DNA binding domain  
GRMZM2G159399_T02|PACid:20879006   1.12e-28   113-222   B3 DNA binding domain  
GRMZM2G159592_T01|PACid:20852281   1.16e-28   204-306   B3 DNA binding domain  
GRMZM2G160005_T01|PACid:20837947   2.75e-44   117-256   B3 DNA binding domain  
GRMZM2G160224_T01|PACid:20861858   0.00000000000628   2-47   B3 DNA binding domain  
GRMZM2G169654_T01|PACid:20827658   1.57e-31   211-314   B3 DNA binding domain  
GRMZM2G169820_T01|PACid:20864153   1.7e-40   120-260   B3 DNA binding domain  
GRMZM2G172621_T01|PACid:20847489   3.01e-21   361-464   B3 DNA binding domain  
GRMZM2G173321_T02|PACid:20875235   1e-23   127-225   B3 DNA binding domain  
GRMZM2G174610_T01|PACid:20823523   7.65e-24   135-231   B3 DNA binding domain  
GRMZM2G174610_T02|PACid:20823525   3.73e-19   1-86   B3 DNA binding domain  
GRMZM2G177244_T01|PACid:20825238   6.47e-20   91-184   B3 DNA binding domain  
  0.00000000000235   609-682   B3 DNA binding domain  
GRMZM2G179121_T01|PACid:20863512   2.49e-16   119-230   B3 DNA binding domain  
GRMZM2G180168_T01|PACid:20872128   1.7e-28   58-156   B3 DNA binding domain  
GRMZM2G181254_T01|PACid:20867683   4.84e-18   158-265   B3 DNA binding domain  
GRMZM2G303168_T01|PACid:20852057   0.00000000471   207-315   B3 DNA binding domain  
GRMZM2G313737_T01|PACid:20854639   5.89e-17   445-551   B3 DNA binding domain  
GRMZM2G317900_T01|PACid:20878445   5.76e-43   89-229   B3 DNA binding domain  
GRMZM2G320754_T01|PACid:20876040   2.35e-20   27-127   B3 DNA binding domain  
  2.94e-17   228-332   B3 DNA binding domain  
GRMZM2G328742_T01|PACid:20856938   6.41e-26   40-144   B3 DNA binding domain  
GRMZM2G338259_T01|PACid:20831574   1.31e-39   123-257   B3 DNA binding domain  
GRMZM2G338259_T02|PACid:20831575   1.31e-39   123-257   B3 DNA binding domain  
GRMZM2G344521_T01|PACid:20871112   1.86e-18   406-510   B3 DNA binding domain  
  3.34e-16   209-314   B3 DNA binding domain  
GRMZM2G344521_T02|PACid:20871111   3.73e-18   691-795   B3 DNA binding domain  
  6.47e-16   494-599   B3 DNA binding domain  
GRMZM2G352159_T01|PACid:20829407   3.4e-35   131-238   B3 DNA binding domain  
GRMZM2G352159_T02|PACid:20829405   3.92e-41   131-266   B3 DNA binding domain  
GRMZM2G352159_T03|PACid:20829404   4.32e-41   51-186   B3 DNA binding domain  
GRMZM2G352159_T04|PACid:20829401   4.45e-35   133-240   B3 DNA binding domain  
GRMZM2G352159_T05|PACid:20829403   4.45e-35   131-238   B3 DNA binding domain  
GRMZM2G352159_T06|PACid:20829402   4.45e-35   131-238   B3 DNA binding domain  
GRMZM2G352159_T07|PACid:20829406   3.4e-35   131-238   B3 DNA binding domain  
GRMZM2G361376_T01|PACid:20825062   3.66e-19   111-226   B3 DNA binding domain  
GRMZM2G378580_T01|PACid:20857208   1.67e-40   143-278   B3 DNA binding domain  
GRMZM2G378580_T02|PACid:20857209   1.67e-40   142-277   B3 DNA binding domain  
GRMZM2G378580_T05|PACid:20857210   1.57e-40   175-310   B3 DNA binding domain  
GRMZM2G378580_T06|PACid:20857211   1.37e-40   142-277   B3 DNA binding domain  
GRMZM2G378580_T07|PACid:20857214   0.0000000000194   142-178   B3 DNA binding domain  
GRMZM2G390641_T01|PACid:20822408   2.88e-29   116-223   B3 DNA binding domain  
GRMZM2G390641_T02|PACid:20822409   2.75e-29   116-223   B3 DNA binding domain  
GRMZM2G405170_T01|PACid:20875712   1.14e-26   24-132   B3 DNA binding domain  
GRMZM2G405699_T01|PACid:20821688   0.00000000000051   233-316   B3 DNA binding domain  
GRMZM2G405699_T02|PACid:20821689   0.00000000000051   230-313   B3 DNA binding domain  
GRMZM2G405699_T03|PACid:20821690   0.000000000000145   97-180   B3 DNA binding domain  
GRMZM2G423393_T01|PACid:20872154   6.54e-26   77-184   B3 DNA binding domain  
GRMZM2G437460_T01|PACid:20826469   9.29e-42   141-248   B3 DNA binding domain  
GRMZM2G437460_T02|PACid:20826470   8.24e-42   141-249   B3 DNA binding domain  
GRMZM2G441325_T01|PACid:20822934   6.15e-43   123-243   B3 DNA binding domain  
GRMZM2G464422_T01|PACid:20827924   0.000000018   141-241   B3 DNA binding domain  
GRMZM2G475263_T01|PACid:20831393   2.75e-37   108-248   B3 DNA binding domain  
GRMZM2G475263_T02|PACid:20831394   4.45e-33   101-207   B3 DNA binding domain  
GRMZM2G475882_T01|PACid:20873181   0.00000000000000119   113-159   Type II restriction endonuclease effector domain  
GRMZM2G475882_T02|PACid:20873182   0.00000000000000119   113-159   Type II restriction endonuclease effector domain  
GRMZM2G522066_T01|PACid:20863619   1.33e-17   7-112   B3 DNA binding domain  
GRMZM2G702026_T01|PACid:20881540   1.96e-43   113-251   B3 DNA binding domain  
GRMZM5G805685_T01|PACid:20875698   1.16e-27   38-134   B3 DNA binding domain  
GRMZM5G805685_T02|PACid:20875697   1.19e-27   38-134   B3 DNA binding domain  
GRMZM5G808366_T01|PACid:20847883   9.03e-28   111-218   B3 DNA binding domain  
GRMZM5G834874_T01|PACid:20881769   0.0000000000471   218-300   B3 DNA binding domain  
  0.000000000373   871-932   B3 DNA binding domain  
GRMZM5G834874_T02|PACid:20881770   0.0000000000392   218-300   B3 DNA binding domain  
  0.000000000314   751-812   B3 DNA binding domain  
GRMZM5G874163_T01|PACid:20850597   7.59e-45   114-265   B3 DNA binding domain  
GRMZM5G874163_T02|PACid:20850596   1.06e-44   114-265   B3 DNA binding domain  
GRMZM5G874163_T03|PACid:20850595   3.01e-44   114-265   B3 DNA binding domain  
 
Weak hits:
AC204821.3_FGT004|PACid:20865136   0.0569   20-58   B3 DNA binding domain  
GRMZM2G089640_T01|PACid:20822081   0.0824   5-48   Type II restriction endonuclease effector domain  
GRMZM2G174610_T03|PACid:20823524   0.0133   136-158   B3 DNA binding domain  
GRMZM2G355906_T03|PACid:20847877   0.000184   125-172   B3 DNA binding domain  
GRMZM2G371056_T01|PACid:20852039   0.0392   192-255   B3 DNA binding domain  
GRMZM2G423315_T01|PACid:20867035   0.000863   28-65   B3 DNA binding domain  
GRMZM2G490971_T01|PACid:20871123   0.0373   17-74   Type II restriction endonuclease effector domain  
GRMZM2G508983_T01|PACid:20829649   0.0373   17-74   Type II restriction endonuclease effector domain  
GRMZM5G883882_T01|PACid:20841571   0.0373   17-74   Type II restriction endonuclease effector domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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