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DNA-binding pseudobarrel domain superfamily domain assignments
in
Thellungiella halophila v173

Assignment details

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Thellungiella halophila v173 has 198 significant domains in 126 proteins.

     

Sequence ID   Evalue   Region   Family  
Thhalv10000010m|PACid:20208455   7.46e-23   809-904   B3 DNA binding domain  
  1.31e-22   1225-1320   B3 DNA binding domain  
  2.75e-22   359-457   B3 DNA binding domain  
  9.42e-22   64-164   B3 DNA binding domain  
  6.87e-21   648-747   B3 DNA binding domain  
  2.16e-19   1380-1478   B3 DNA binding domain  
  8.83e-18   200-295   B3 DNA binding domain  
  0.00000000000000275   1085-1162   B3 DNA binding domain  
  0.0569   962-991   B3 DNA binding domain  
Thhalv10000028m|PACid:20208357   3.92e-22   612-716   B3 DNA binding domain  
  1.04e-20   455-557   B3 DNA binding domain  
  3.34e-19   136-237   B3 DNA binding domain  
  2.94e-17   937-1034   B3 DNA binding domain  
  1e-16   297-393   B3 DNA binding domain  
  0.00000000000000149   834-913   B3 DNA binding domain  
  0.000000000294   1-81   B3 DNA binding domain  
Thhalv10000097m|PACid:20208741   1.1e-18   174-275   B3 DNA binding domain  
  1.84e-18   342-446   B3 DNA binding domain  
  0.00000000000000167   9-107   B3 DNA binding domain  
  0.0000000000000961   495-600   B3 DNA binding domain  
Thhalv10000111m|PACid:20208496   3.53e-24   288-388   B3 DNA binding domain  
  7.65e-19   443-541   B3 DNA binding domain  
  8.83e-19   3-105   B3 DNA binding domain  
  1.14e-18   135-232   B3 DNA binding domain  
Thhalv10000130m|PACid:20208871   6.87e-22   147-242   B3 DNA binding domain  
  3.14e-21   275-371   B3 DNA binding domain  
  6.47e-19   10-109   B3 DNA binding domain  
  1.2e-16   417-514   B3 DNA binding domain  
Thhalv10000279m|PACid:20208355   8.83e-21   140-235   B3 DNA binding domain  
  1.86e-18   38-133   B3 DNA binding domain  
Thhalv10000515m|PACid:20208843   3.14e-19   136-235   B3 DNA binding domain  
  3.53e-19   286-385   B3 DNA binding domain  
  1.18e-18   4-104   B3 DNA binding domain  
Thhalv10000528m|PACid:20208661   0.000000471   13-113   B3 DNA binding domain  
Thhalv10000541m|PACid:20208467   0.00000824   14-118   B3 DNA binding domain  
Thhalv10000579m|PACid:20208620   5.1e-22   21-121   B3 DNA binding domain  
  0.000000000000844   295-375   B3 DNA binding domain  
  0.0000000000314   197-253   B3 DNA binding domain  
Thhalv10000608m|PACid:20208283   0.0000000000883   1-96   B3 DNA binding domain  
Thhalv10000676m|PACid:20208372   0.00000000149   131-216   B3 DNA binding domain  
Thhalv10000689m|PACid:20208748   0.0000011   14-114   B3 DNA binding domain  
Thhalv10000711m|PACid:20208463   0.0000981   13-113   B3 DNA binding domain  
Thhalv10000999m|PACid:20202791   3.34e-23   11-103   B3 DNA binding domain  
  0.00000000255   165-249   B3 DNA binding domain  
Thhalv10001365m|PACid:20188811   7.19e-40   109-253   B3 DNA binding domain  
Thhalv10001555m|PACid:20188796   4.58e-30   30-125   B3 DNA binding domain  
Thhalv10001785m|PACid:20189016   6.08e-22   186-280   B3 DNA binding domain  
  0.0000000000000049   14-114   B3 DNA binding domain  
Thhalv10003110m|PACid:20196814   2.94e-22   578-672   B3 DNA binding domain  
Thhalv10003384m|PACid:20208196   0.000000334   164-269   B3 DNA binding domain  
Thhalv10003641m|PACid:20199612   3.01e-40   160-293   B3 DNA binding domain  
Thhalv10004496m|PACid:20199788   2.35e-21   14-116   B3 DNA binding domain  
  0.0000000000000124   232-322   B3 DNA binding domain  
Thhalv10004508m|PACid:20200254   7.06e-30   184-287   B3 DNA binding domain  
Thhalv10004752m|PACid:20199853   0.000000000000294   13-112   B3 DNA binding domain  
  0.000000000706   176-265   B3 DNA binding domain  
Thhalv10005481m|PACid:20199536   1.57e-22   101-203   B3 DNA binding domain  
Thhalv10005614m|PACid:20199273   0.00000216   17-109   B3 DNA binding domain  
Thhalv10005857m|PACid:20190472   2.88e-39   111-252   B3 DNA binding domain  
Thhalv10006123m|PACid:20190422   3.66e-32   18-129   B3 DNA binding domain  
Thhalv10006635m|PACid:20185449   3.4e-44   116-255   B3 DNA binding domain  
Thhalv10006747m|PACid:20185923   1.7e-48   114-258   B3 DNA binding domain  
Thhalv10006748m|PACid:20187001   1.29e-45   145-284   B3 DNA binding domain  
Thhalv10006754m|PACid:20185924   1.7e-48   114-258   B3 DNA binding domain  
Thhalv10007983m|PACid:20187835   1.44e-31   194-305   B3 DNA binding domain  
Thhalv10008068m|PACid:20187490   7.06e-30   53-145   B3 DNA binding domain  
Thhalv10009082m|PACid:20186232   3.92e-22   7-100   B3 DNA binding domain  
Thhalv10009348m|PACid:20188047   0.00000000000000961   92-217   B3 DNA binding domain  
Thhalv10009500m|PACid:20186111   3.53e-20   9-111   B3 DNA binding domain  
  1.82e-16   263-349   B3 DNA binding domain  
  0.00000000000000179   151-251   B3 DNA binding domain  
Thhalv10009508m|PACid:20187652   0.000000000373   159-293   B3 DNA binding domain  
Thhalv10009706m|PACid:20185609   0.00000000000153   16-122   B3 DNA binding domain  
Thhalv10009730m|PACid:20186320   0.0000000000167   216-322   B3 DNA binding domain  
Thhalv10009849m|PACid:20185584   5.1e-21   172-276   B3 DNA binding domain  
Thhalv10009984m|PACid:20186046   0.0000000000373   143-259   B3 DNA binding domain  
Thhalv10010019m|PACid:20188671   3.66e-33   179-288   B3 DNA binding domain  
Thhalv10010633m|PACid:20207509   1.02e-23   11-102   B3 DNA binding domain  
  0.0000000000255   177-258   B3 DNA binding domain  
Thhalv10011760m|PACid:20184627   7.26e-20   28-122   B3 DNA binding domain  
Thhalv10012062m|PACid:20185054   1.26e-22   120-221   B3 DNA binding domain  
Thhalv10012074m|PACid:20185111   2.35e-33   5-112   B3 DNA binding domain  
Thhalv10012152m|PACid:20184762   4.19e-28   182-283   B3 DNA binding domain  
Thhalv10012161m|PACid:20185016   6.93e-28   152-250   B3 DNA binding domain  
Thhalv10012233m|PACid:20184972   0.000000000255   192-311   B3 DNA binding domain  
Thhalv10012253m|PACid:20184169   0.000000000000182   3-96   B3 DNA binding domain  
Thhalv10012266m|PACid:20184241   3.66e-16   1-84   B3 DNA binding domain  
Thhalv10012356m|PACid:20184298   2.88e-27   180-280   B3 DNA binding domain  
Thhalv10012377m|PACid:20184279   1.31e-25   207-311   B3 DNA binding domain  
Thhalv10012513m|PACid:20203957   1.31e-42   60-199   B3 DNA binding domain  
Thhalv10012728m|PACid:20205149   4.71e-42   168-280   B3 DNA binding domain  
Thhalv10014143m|PACid:20206480   1.06e-18   14-118   B3 DNA binding domain  
  0.00000000000000765   213-309   B3 DNA binding domain  
Thhalv10014229m|PACid:20204077   7.65e-19   5-102   B3 DNA binding domain  
  0.000122   203-283   B3 DNA binding domain  
Thhalv10014488m|PACid:20206065   1.14e-17   10-104   B3 DNA binding domain  
  0.00000000000804   145-242   B3 DNA binding domain  
Thhalv10014972m|PACid:20203483   4.51e-23   9-104   B3 DNA binding domain  
Thhalv10015617m|PACid:20203507   1.14e-19   14-119   B3 DNA binding domain  
  5.1e-18   193-283   B3 DNA binding domain  
Thhalv10015675m|PACid:20205196   3.92e-30   40-161   B3 DNA binding domain  
Thhalv10015705m|PACid:20206714   2.35e-21   14-118   B3 DNA binding domain  
  3.14e-18   203-294   B3 DNA binding domain  
Thhalv10016118m|PACid:20206561   0.00000051   20-100   B3 DNA binding domain  
Thhalv10016263m|PACid:20180001   1.57e-18   302-400   B3 DNA binding domain  
Thhalv10016329m|PACid:20180956   3.79e-29   110-216   B3 DNA binding domain  
Thhalv10016394m|PACid:20181239   2.22e-42   151-278   B3 DNA binding domain  
Thhalv10017156m|PACid:20181075   4.58e-31   35-144   B3 DNA binding domain  
Thhalv10017517m|PACid:20181248   0.00000000011   133-237   B3 DNA binding domain  
Thhalv10017854m|PACid:20180436   0.00000942   65-106   B3 DNA binding domain  
Thhalv10017938m|PACid:20179876   0.0000000157   2-124   B3 DNA binding domain  
Thhalv10018139m|PACid:20192001   4.58e-48   113-256   B3 DNA binding domain  
Thhalv10018331m|PACid:20192490   6.15e-29   110-222   B3 DNA binding domain  
Thhalv10019015m|PACid:20192089   6.28e-25   118-214   B3 DNA binding domain  
Thhalv10019518m|PACid:20192323   0.000000000000143   18-120   B3 DNA binding domain  
Thhalv10019566m|PACid:20192106   8.11e-32   182-283   B3 DNA binding domain  
Thhalv10019801m|PACid:20191643   0.0000667   3-72   B3 DNA binding domain  
Thhalv10021075m|PACid:20182250   4.32e-22   237-338   B3 DNA binding domain  
  1.35e-21   3-97   B3 DNA binding domain  
Thhalv10021305m|PACid:20183091   1.27e-30   31-145   B3 DNA binding domain  
Thhalv10021356m|PACid:20183715   0.000000000000314   8-104   B3 DNA binding domain  
  0.0000000000844   158-243   B3 DNA binding domain  
Thhalv10021527m|PACid:20183453   3.53e-24   24-124   B3 DNA binding domain  
Thhalv10022043m|PACid:20183918   5.1e-17   24-126   B3 DNA binding domain  
Thhalv10022138m|PACid:20181474   3.53e-18   15-118   B3 DNA binding domain  
  5.49e-17   218-308   B3 DNA binding domain  
Thhalv10022244m|PACid:20182095   0.0000000000022   65-172   B3 DNA binding domain  
Thhalv10022269m|PACid:20183256   0.0000745   5-75   B3 DNA binding domain  
Thhalv10022336m|PACid:20182221   4.71e-20   7-107   B3 DNA binding domain  
  1.67e-17   141-230   B3 DNA binding domain  
Thhalv10022780m|PACid:20202142   0.0000000000122   218-316   B3 DNA binding domain  
  0.000000000128   15-47,80-136   B3 DNA binding domain  
Thhalv10023005m|PACid:20202014   0.00000000129   5-93   B3 DNA binding domain  
Thhalv10023054m|PACid:20202135   7.46e-16   3-84   B3 DNA binding domain  
  0.000000011   169-247   B3 DNA binding domain  
Thhalv10023325m|PACid:20201174   1.86e-44   117-257   B3 DNA binding domain  
Thhalv10023326m|PACid:20201173   1.86e-44   117-257   B3 DNA binding domain  
Thhalv10024065m|PACid:20200950   0.000000000765   15-76   B3 DNA binding domain  
Thhalv10024481m|PACid:20195016   5.49e-20   270-373   B3 DNA binding domain  
Thhalv10024526m|PACid:20195208   1.31e-19   329-430   B3 DNA binding domain  
Thhalv10024554m|PACid:20195557   1.44e-38   182-320   B3 DNA binding domain  
Thhalv10024601m|PACid:20195479   7.72e-30   115-223   B3 DNA binding domain  
Thhalv10024662m|PACid:20195558   1.16e-38   110-248   B3 DNA binding domain  
Thhalv10024698m|PACid:20195209   1.11e-17   216-313   B3 DNA binding domain  
Thhalv10024778m|PACid:20195017   3.53e-20   270-373   B3 DNA binding domain  
Thhalv10024893m|PACid:20192994   2.75e-18   153-254   B3 DNA binding domain  
  8.83e-17   294-392   B3 DNA binding domain  
  0.0000000000549   27-88   B3 DNA binding domain  
Thhalv10025105m|PACid:20195192   3.53e-22   9-102   B3 DNA binding domain  
  2.55e-20   119-218   B3 DNA binding domain  
  6.47e-16   223-294   B3 DNA binding domain  
  0.000000000000314   364-465   B3 DNA binding domain  
Thhalv10025812m|PACid:20193747   0.0000000000171   4-49   B3 DNA binding domain  
  0.00001   207-302   B3 DNA binding domain  
Thhalv10026054m|PACid:20194502   0.0000000000216   4-49   B3 DNA binding domain  
  0.00000175   155-250   B3 DNA binding domain  
Thhalv10026818m|PACid:20193545   1.39e-19   8-105   B3 DNA binding domain  
  3.14e-19   126-218   B3 DNA binding domain  
  4.9e-18   251-353   B3 DNA binding domain  
Thhalv10027046m|PACid:20194382   0.00000000000000153   10-101   B3 DNA binding domain  
  0.00000000000000235   184-274   B3 DNA binding domain  
  0.00000000000000275   299-396   B3 DNA binding domain  
Thhalv10027164m|PACid:20194005   7.06e-25   9-109   B3 DNA binding domain  
  3.14e-21   145-244   B3 DNA binding domain  
  0.0000000000000294   249-333   B3 DNA binding domain  
Thhalv10027291m|PACid:20195068   8.89e-21   126-218   B3 DNA binding domain  
Thhalv10027418m|PACid:20195830   1.77e-21   172-275   B3 DNA binding domain  
  0.000000000000255   8-101   B3 DNA binding domain  
  0.0000000255   312-409   B3 DNA binding domain  
Thhalv10027563m|PACid:20194119   2.35e-17   2-99   B3 DNA binding domain  
  4.51e-17   125-204   B3 DNA binding domain  
  0.00000000000000275   219-314   B3 DNA binding domain  
Thhalv10028002m|PACid:20189500   0.00000000000000922   12-91   B3 DNA binding domain  
Thhalv10028050m|PACid:20189955   2.35e-20   265-365   B3 DNA binding domain  
  7.19e-20   132-227   B3 DNA binding domain  
  1.14e-18   3-106   B3 DNA binding domain  
  0.00000000000000196   411-487   B3 DNA binding domain  
Thhalv10028136m|PACid:20189592   0.00000000000000687   87-171   B3 DNA binding domain  
  0.0000000000235   8-65   B3 DNA binding domain  
Thhalv10028240m|PACid:20189403   4.12e-20   12-110   B3 DNA binding domain  
  4.19e-20   280-377   B3 DNA binding domain  
  2.75e-16   144-234   B3 DNA binding domain  
Thhalv10028286m|PACid:20189501   0.0000000000000353   71-188   B3 DNA binding domain  
Thhalv10028330m|PACid:20189517   5.1e-18   149-251   B3 DNA binding domain  
  0.00000000000000153   3-113   B3 DNA binding domain  
  0.0000000000112   279-359   B3 DNA binding domain  
Thhalv10028696m|PACid:20196953   1.18e-21   5-103   B3 DNA binding domain  
  0.00000824   325-406   B3 DNA binding domain  
Thhalv10028783m|PACid:20197484   3.79e-30   30-117   B3 DNA binding domain  
Thhalv10029127m|PACid:20197407   0.0000000765   19-119   B3 DNA binding domain  
Thhalv10029136m|PACid:20197544   1.22e-17   244-362   B3 DNA binding domain  
Thhalv10029137m|PACid:20197359   1.29e-20   215-316   B3 DNA binding domain  
  8.83e-17   341-435   B3 DNA binding domain  
  3.73e-16   76-166   B3 DNA binding domain  
Thhalv10029161m|PACid:20197833   6.93e-31   116-241   B3 DNA binding domain  
Thhalv10029259m|PACid:20197343   6.67e-16   284-406   B3 DNA binding domain  
Thhalv10029268m|PACid:20197469   0.0000000451   7-112   B3 DNA binding domain  
Thhalv10029379m|PACid:20196948   2.35e-32   124-252   B3 DNA binding domain  
Thhalv10029469m|PACid:20197619   0.000000000000569   222-344   B3 DNA binding domain  
Thhalv10029471m|PACid:20197403   1.96e-17   214-334   B3 DNA binding domain  
 
Weak hits:
Thhalv10000701m|PACid:20208319   0.000471   35-78   B3 DNA binding domain  
Thhalv10005695m|PACid:20198438   0.00243   88-151   B3 DNA binding domain  
Thhalv10012343m|PACid:20184712   0.00133   182-278   B3 DNA binding domain  
Thhalv10029394m|PACid:20198053   0.000149   20-120   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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