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DNA-binding pseudobarrel domain superfamily domain assignments
in
Capsella rubella v183

Assignment details

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Capsella rubella v183 has 179 significant domains in 122 proteins.

     

Sequence ID   Evalue   Region   Family  
Carubv10000065m|PACid:20907860   1.7e-38   117-224   B3 DNA binding domain  
Carubv10001406m|PACid:20911106   1.24e-29   36-123   B3 DNA binding domain  
Carubv10001579m|PACid:20908342   3.92e-17   14-111   B3 DNA binding domain  
  0.0000000000000196   202-296   B3 DNA binding domain  
Carubv10001689m|PACid:20908400   5.23e-31   43-152   B3 DNA binding domain  
Carubv10001768m|PACid:20908401   4.45e-31   43-152   B3 DNA binding domain  
Carubv10002417m|PACid:20910712   1.18e-20   16-118   B3 DNA binding domain  
  7.46e-20   215-306   B3 DNA binding domain  
Carubv10002458m|PACid:20907889   0.00000000000000143   11-105   B3 DNA binding domain  
Carubv10002495m|PACid:20908585   0.000000000314   17-112   B3 DNA binding domain  
Carubv10002566m|PACid:20908147   0.00000000000000255   14-115   B3 DNA binding domain  
  0.00000000153   174-264   B3 DNA binding domain  
Carubv10002738m|PACid:20909534   0.000000000157   10-85   B3 DNA binding domain  
Carubv10002744m|PACid:20909591   0.00000000000647   5-96   B3 DNA binding domain  
Carubv10002886m|PACid:20910706   0.00000000000000216   3-96   B3 DNA binding domain  
Carubv10002967m|PACid:20908182   0.00000863   24-97   B3 DNA binding domain  
Carubv10003066m|PACid:20909466   0.000000000000569   10-107   B3 DNA binding domain  
Carubv10003165m|PACid:20909306   0.0000000471   21-108   B3 DNA binding domain  
Carubv10003379m|PACid:20907784   0.00000000000000262   10-106   B3 DNA binding domain  
Carubv10003492m|PACid:20907820   0.0000000000000171   13-114   B3 DNA binding domain  
  0.000000000000294   173-262   B3 DNA binding domain  
Carubv10003677m|PACid:20910516   2.55e-17   210-302   B3 DNA binding domain  
  7.26e-17   14-117   B3 DNA binding domain  
Carubv10003750m|PACid:20909480   1.63e-21   7-103   B3 DNA binding domain  
Carubv10004139m|PACid:20894890   1.05e-47   112-255   B3 DNA binding domain  
Carubv10004192m|PACid:20897215   1.31e-18   356-457   B3 DNA binding domain  
Carubv10004194m|PACid:20896645   4.84e-20   281-384   B3 DNA binding domain  
Carubv10004220m|PACid:20896769   9.03e-30   189-297   B3 DNA binding domain  
Carubv10004222m|PACid:20894891   8.89e-48   30-173   B3 DNA binding domain  
Carubv10004462m|PACid:20895752   1.02e-19   286-388   B3 DNA binding domain  
  1.14e-17   179-281   B3 DNA binding domain  
  2.55e-16   468-568   B3 DNA binding domain  
  0.00000000000000432   60-144   B3 DNA binding domain  
Carubv10004562m|PACid:20895929   3.73e-18   422-517   B3 DNA binding domain  
  4.12e-18   9-110   B3 DNA binding domain  
  0.00000000000373   294-386   B3 DNA binding domain  
  0.00000000000471   145-236   B3 DNA binding domain  
Carubv10004653m|PACid:20893631   1.18e-19   133-235   B3 DNA binding domain  
  0.00000000235   266-363   B3 DNA binding domain  
  0.00000000255   11-71   B3 DNA binding domain  
Carubv10004702m|PACid:20894362   1.35e-22   9-110   B3 DNA binding domain  
  2.94e-20   142-237   B3 DNA binding domain  
  0.0000000000149   262-363   B3 DNA binding domain  
Carubv10004710m|PACid:20896219   1.53e-20   271-370   B3 DNA binding domain  
  0.000000000000294   6-96   B3 DNA binding domain  
  0.0000000000049   143-238   B3 DNA binding domain  
Carubv10004975m|PACid:20896719   6.67e-21   8-111   B3 DNA binding domain  
  1.12e-18   161-249   B3 DNA binding domain  
  0.000000000000746   289-393   B3 DNA binding domain  
Carubv10005377m|PACid:20893512   7.85e-19   190-285   B3 DNA binding domain  
  0.0000235   2-30   B3 DNA binding domain  
Carubv10006245m|PACid:20894220   9.61e-19   1-80   B3 DNA binding domain  
  0.000129   254-339   B3 DNA binding domain  
Carubv10006513m|PACid:20894871   5.62e-39   117-255   B3 DNA binding domain  
Carubv10006696m|PACid:20895811   4.51e-20   276-377   B3 DNA binding domain  
  1.75e-17   157-250   B3 DNA binding domain  
  0.000000000184   30-88   B3 DNA binding domain  
Carubv10006905m|PACid:20894516   1.77e-22   8-108   B3 DNA binding domain  
  2.55e-19   145-240   B3 DNA binding domain  
  1.82e-16   270-371   B3 DNA binding domain  
Carubv10007011m|PACid:20894547   0.00000000000149   251-376   B3 DNA binding domain  
Carubv10007012m|PACid:20895441   0.000000000000235   164-287   B3 DNA binding domain  
Carubv10007553m|PACid:20893672   7.85e-22   8-109   B3 DNA binding domain  
  2.55e-18   130-210   B3 DNA binding domain  
  0.00000000000275   249-331   B3 DNA binding domain  
Carubv10008159m|PACid:20891006   3.27e-44   116-255   B3 DNA binding domain  
Carubv10008165m|PACid:20891007   3.27e-44   101-240   B3 DNA binding domain  
Carubv10008239m|PACid:20889064   1.83e-48   114-258   B3 DNA binding domain  
Carubv10008258m|PACid:20888916   1.44e-45   149-288   B3 DNA binding domain  
Carubv10009540m|PACid:20890696   8.11e-30   52-144   B3 DNA binding domain  
Carubv10009612m|PACid:20889422   8.63e-34   185-296   B3 DNA binding domain  
Carubv10010224m|PACid:20890230   4.32e-22   123-224   B3 DNA binding domain  
Carubv10010429m|PACid:20888910   5.89e-32   12-117   B3 DNA binding domain  
Carubv10010882m|PACid:20891342   1.44e-18   161-260   B3 DNA binding domain  
Carubv10011010m|PACid:20892221   7.98e-30   120-248   B3 DNA binding domain  
Carubv10011257m|PACid:20893150   1.15e-26   156-257   B3 DNA binding domain  
Carubv10011321m|PACid:20892601   2.49e-29   120-248   B3 DNA binding domain  
Carubv10011592m|PACid:20890196   3.4e-27   179-277   B3 DNA binding domain  
Carubv10011639m|PACid:20892821   0.00000000000589   98-205   B3 DNA binding domain  
Carubv10012044m|PACid:20888777   0.000000000824   147-262   B3 DNA binding domain  
Carubv10012060m|PACid:20890743   9.42e-20   489-587   B3 DNA binding domain  
  3.73e-19   9-111   B3 DNA binding domain  
  0.00000000000000451   146-247   B3 DNA binding domain  
  0.00000000000373   397-469   B3 DNA binding domain  
  0.000000000863   255-319   B3 DNA binding domain  
Carubv10012424m|PACid:20892847   5.49e-29   120-240   B3 DNA binding domain  
Carubv10012547m|PACid:20892947   3.14e-21   2-82   B3 DNA binding domain  
Carubv10012589m|PACid:20890121   1.77e-16   80-199   B3 DNA binding domain  
Carubv10012600m|PACid:20890454   0.0000000000000981   15-123   B3 DNA binding domain  
Carubv10012735m|PACid:20888708   0.00000000000000143   11-105   B3 DNA binding domain  
Carubv10014376m|PACid:20897875   6.15e-29   34-152   B3 DNA binding domain  
Carubv10014420m|PACid:20899097   2.16e-24   118-216   B3 DNA binding domain  
Carubv10014872m|PACid:20899728   0.0000000000000216   22-127   B3 DNA binding domain  
Carubv10015086m|PACid:20900340   6.87e-19   4-103   B3 DNA binding domain  
  2.16e-16   224-314   B3 DNA binding domain  
  0.00000000000000194   137-222   B3 DNA binding domain  
Carubv10015240m|PACid:20897717   1.96e-19   7-104   B3 DNA binding domain  
Carubv10015496m|PACid:20899404   6.08e-20   15-120   B3 DNA binding domain  
  0.00000000000000569   208-302   B3 DNA binding domain  
Carubv10015637m|PACid:20900975   4.9e-22   237-338   B3 DNA binding domain  
  5.1e-22   3-97   B3 DNA binding domain  
Carubv10015789m|PACid:20900427   2.35e-17   18-119   B3 DNA binding domain  
  2.55e-16   227-319   B3 DNA binding domain  
Carubv10015809m|PACid:20898079   9.61e-24   24-122   B3 DNA binding domain  
Carubv10016094m|PACid:20897840   2.75e-22   572-666   B3 DNA binding domain  
Carubv10016124m|PACid:20897752   0.0000000151   13-47   B3 DNA binding domain  
  0.00000051   128-206   B3 DNA binding domain  
Carubv10016176m|PACid:20899217   0.0000000000000137   91-197   B3 DNA binding domain  
Carubv10016313m|PACid:20900418   7.46e-19   196-322   B3 DNA binding domain  
Carubv10016530m|PACid:20893346   0.00000000000000102   201-315   B3 DNA binding domain  
Carubv10017696m|PACid:20886408   3.14e-32   22-133   B3 DNA binding domain  
Carubv10018954m|PACid:20887524   8.37e-41   113-257   B3 DNA binding domain  
Carubv10019207m|PACid:20887526   2.22e-30   182-289   B3 DNA binding domain  
Carubv10019277m|PACid:20885718   8.24e-23   11-105   B3 DNA binding domain  
  0.000000235   183-277   B3 DNA binding domain  
Carubv10019353m|PACid:20885769   1.83e-23   92-195   B3 DNA binding domain  
Carubv10019454m|PACid:20885881   6.93e-29   121-249   B3 DNA binding domain  
Carubv10019991m|PACid:20905306   2.62e-27   139-247   B3 DNA binding domain  
Carubv10020536m|PACid:20904479   2.35e-32   191-294   B3 DNA binding domain  
Carubv10021689m|PACid:20906037   0.0000000000053   133-242   B3 DNA binding domain  
Carubv10022396m|PACid:20905587   0.000000051   60-151   B3 DNA binding domain  
Carubv10022415m|PACid:20907031   3.53e-44   113-253   B3 DNA binding domain  
Carubv10022654m|PACid:20901581   2.22e-19   303-401   B3 DNA binding domain  
Carubv10022672m|PACid:20901898   2.55e-22   274-369   B3 DNA binding domain  
  3.92e-22   113-211   B3 DNA binding domain  
  3.73e-20   607-700   B3 DNA binding domain  
Carubv10022755m|PACid:20901993   2.88e-29   108-216   B3 DNA binding domain  
Carubv10022841m|PACid:20903373   1.07e-38   110-254   B3 DNA binding domain  
Carubv10022859m|PACid:20901899   1.67e-22   243-338   B3 DNA binding domain  
  2.55e-22   82-180   B3 DNA binding domain  
Carubv10022918m|PACid:20901093   5.3e-21   147-246   B3 DNA binding domain  
  1.18e-17   456-558   B3 DNA binding domain  
  2.16e-17   294-391   B3 DNA binding domain  
  0.00000000000000549   21-121   B3 DNA binding domain  
Carubv10022974m|PACid:20902913   8.24e-21   258-354   B3 DNA binding domain  
  5.1e-19   138-233   B3 DNA binding domain  
  8.44e-18   9-111   B3 DNA binding domain  
  0.00000000000000216   435-530   B3 DNA binding domain  
Carubv10023444m|PACid:20901847   5.49e-22   278-376   B3 DNA binding domain  
  8.24e-22   134-235   B3 DNA binding domain  
  3.4e-19   4-100   B3 DNA binding domain  
Carubv10023656m|PACid:20902797   6.41e-30   40-135   B3 DNA binding domain  
Carubv10023826m|PACid:20901776   0.0000000000000275   13-107   B3 DNA binding domain  
  0.00000765   186-262   B3 DNA binding domain  
Carubv10023925m|PACid:20903913   8.24e-31   35-143   B3 DNA binding domain  
Carubv10024004m|PACid:20901058   0.000000000000255   108-212   B3 DNA binding domain  
Carubv10024576m|PACid:20901961   0.0000000000000536   23-119   B3 DNA binding domain  
Carubv10024841m|PACid:20902589   0.00000000000000615   10-112   B3 DNA binding domain  
Carubv10024885m|PACid:20901612   0.00000141   169-293   B3 DNA binding domain  
Carubv10024937m|PACid:20902477   0.0000000000000981   166-273   B3 DNA binding domain  
Carubv10024960m|PACid:20902510   0.0000000000405   72-183   B3 DNA binding domain  
Carubv10025070m|PACid:20901514   0.0000175   127-187   B3 DNA binding domain  
Carubv10025168m|PACid:20902116   0.000000000000011   11-107   B3 DNA binding domain  
Carubv10025185m|PACid:20903510   1.96e-42   149-276   B3 DNA binding domain  
Carubv10025274m|PACid:20903527   0.0000000000000147   157-266   B3 DNA binding domain  
Carubv10025316m|PACid:20903979   0.0000000000141   164-277   B3 DNA binding domain  
Carubv10025359m|PACid:20902726   0.00000000000000523   20-116   B3 DNA binding domain  
Carubv10025498m|PACid:20901406   1.57e-19   125-214   B3 DNA binding domain  
  1.24e-18   3-99   B3 DNA binding domain  
  0.00000000000000129   251-334   B3 DNA binding domain  
Carubv10025616m|PACid:20903740   0.000000000569   84-198   B3 DNA binding domain  
Carubv10025683m|PACid:20904275   0.000000000000275   177-290   B3 DNA binding domain  
Carubv10025688m|PACid:20903671   1.1e-17   20-122   B3 DNA binding domain  
  0.00000000000647   449-544   B3 DNA binding domain  
  0.00000000000844   137-220   B3 DNA binding domain  
Carubv10025860m|PACid:20911685   3.27e-40   161-293   B3 DNA binding domain  
Carubv10025912m|PACid:20911347   1.03e-42   164-283   B3 DNA binding domain  
Carubv10026561m|PACid:20912935   3.34e-21   95-189   B3 DNA binding domain  
  0.000135   296-385   B3 DNA binding domain  
Carubv10026947m|PACid:20912886   5.89e-23   125-223   B3 DNA binding domain  
Carubv10027266m|PACid:20913054   1.86e-24   58-153   B3 DNA binding domain  
Carubv10027756m|PACid:20912318   0.00000000161   10-122   B3 DNA binding domain  
Carubv10027909m|PACid:20912869   3.14e-19   12-111   B3 DNA binding domain  
  0.0000000000412   215-319   B3 DNA binding domain  
Carubv10028109m|PACid:20912281   4.9e-19   9-106   B3 DNA binding domain  
  0.0000000000000608   217-305   B3 DNA binding domain  
Carubv10028336m|PACid:20912722   0.0000000235   35-91   B3 DNA binding domain  
Carubv10028409m|PACid:20912293   0.00000000000000192   1-79   B3 DNA binding domain  
  0.00000000116   163-257   B3 DNA binding domain  
Carubv10028515m|PACid:20912784   1.04e-17   3-106   B3 DNA binding domain  
  0.000000124   258-352   B3 DNA binding domain  
 
Weak hits:
Carubv10003362m|PACid:20907266   0.00216   47-151   B3 DNA binding domain  
Carubv10003756m|PACid:20909095   0.000804   15-69   B3 DNA binding domain  
Carubv10025305m|PACid:20903447   0.000294   19-85   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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