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DNA-binding pseudobarrel domain superfamily domain assignments
in
Solanum tuberosum

Assignment details

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Solanum tuberosum has 226 significant domains in 171 proteins.

     

Sequence ID   Evalue   Region   Family  
PGSC0003DMP400000239   2.55e-16   69-171   B3 DNA binding domain  
PGSC0003DMP400000240   8.83e-16   72-171   B3 DNA binding domain  
PGSC0003DMP400000261   2.45e-40   103-240   B3 DNA binding domain  
PGSC0003DMP400000262   1.26e-39   103-240   B3 DNA binding domain  
PGSC0003DMP400000732   3.66e-17   123-220   B3 DNA binding domain  
PGSC0003DMP400000736   0.00000000883   240-326   B3 DNA binding domain  
PGSC0003DMP400001547   3.79e-31   205-304   B3 DNA binding domain  
PGSC0003DMP400003216   0.00000000000000922   24-124   B3 DNA binding domain  
PGSC0003DMP400003217   0.0000000000000131   43-143   B3 DNA binding domain  
PGSC0003DMP400004261   1.57e-42   63-204   B3 DNA binding domain  
PGSC0003DMP400004262   1.7e-42   114-255   B3 DNA binding domain  
PGSC0003DMP400004998   2.55e-22   129-221   B3 DNA binding domain  
PGSC0003DMP400004999   5.1e-22   225-317   B3 DNA binding domain  
  2.94e-19   17-114   B3 DNA binding domain  
PGSC0003DMP400005000   6.28e-19   13-111   B3 DNA binding domain  
  1.96e-16   225-316   B3 DNA binding domain  
PGSC0003DMP400006184   0.0000000667   252-355   B3 DNA binding domain  
  0.000000143   131-235   B3 DNA binding domain  
  0.000000196   3-109   B3 DNA binding domain  
PGSC0003DMP400006185   0.0000000667   252-355   B3 DNA binding domain  
  0.000000143   131-235   B3 DNA binding domain  
  0.000000196   3-109   B3 DNA binding domain  
PGSC0003DMP400006186   0.0000000667   252-355   B3 DNA binding domain  
  0.000000143   131-235   B3 DNA binding domain  
  0.000000196   3-109   B3 DNA binding domain  
PGSC0003DMP400006187   0.0000000667   252-355   B3 DNA binding domain  
  0.000000143   131-235   B3 DNA binding domain  
  0.000000196   3-109   B3 DNA binding domain  
PGSC0003DMP400006736   3.4e-47   134-276   B3 DNA binding domain  
PGSC0003DMP400010383   1.44e-31   46-155   B3 DNA binding domain  
PGSC0003DMP400010384   1.83e-31   46-155   B3 DNA binding domain  
PGSC0003DMP400010438   8.83e-18   128-223   B3 DNA binding domain  
  0.00000000000000188   2-81   B3 DNA binding domain  
PGSC0003DMP400010522   2.55e-24   10-110   B3 DNA binding domain  
  0.0000000000275   156-250   B3 DNA binding domain  
PGSC0003DMP400011164   0.00000000235   728-847   B3 DNA binding domain  
PGSC0003DMP400013222   8.5e-29   199-294   B3 DNA binding domain  
PGSC0003DMP400014111   1.37e-23   119-217   B3 DNA binding domain  
PGSC0003DMP400014193   2.88e-29   168-239   B3 DNA binding domain  
PGSC0003DMP400014194   3.66e-44   168-293   B3 DNA binding domain  
PGSC0003DMP400014218   1.83e-29   108-214   B3 DNA binding domain  
PGSC0003DMP400015721   2.35e-30   26-141   B3 DNA binding domain  
PGSC0003DMP400015722   2.22e-30   35-150   B3 DNA binding domain  
PGSC0003DMP400016848   8.63e-18   107-203   B3 DNA binding domain  
  0.0000000000000746   4-77   B3 DNA binding domain  
PGSC0003DMP400016855   4.51e-19   52-151   B3 DNA binding domain  
PGSC0003DMP400016858   1.88e-19   5-103   B3 DNA binding domain  
  1.94e-16   136-236   B3 DNA binding domain  
PGSC0003DMP400016859   1.88e-19   5-103   B3 DNA binding domain  
  1.94e-16   136-236   B3 DNA binding domain  
PGSC0003DMP400016860   6.47e-19   48-146   B3 DNA binding domain  
PGSC0003DMP400016861   1.82e-19   259-353   B3 DNA binding domain  
  5.69e-19   5-103   B3 DNA binding domain  
  8.44e-18   403-501   B3 DNA binding domain  
  6.28e-16   137-236   B3 DNA binding domain  
PGSC0003DMP400016862   1.88e-19   5-103   B3 DNA binding domain  
  1.94e-16   136-236   B3 DNA binding domain  
PGSC0003DMP400016863   3.79e-19   21-114   B3 DNA binding domain  
  7.32e-17   143-235   B3 DNA binding domain  
  1.1e-16   246-337   B3 DNA binding domain  
PGSC0003DMP400016864   1.23e-19   87-182   B3 DNA binding domain  
  1.49e-16   211-303   B3 DNA binding domain  
  1.49e-16   314-405   B3 DNA binding domain  
  0.000000000000163   2-57   B3 DNA binding domain  
PGSC0003DMP400016865   3.34e-21   48-140   B3 DNA binding domain  
PGSC0003DMP400016866   6.28e-18   8-83   B3 DNA binding domain  
PGSC0003DMP400016867   1.77e-20   208-300   B3 DNA binding domain  
  5.49e-16   87-181   B3 DNA binding domain  
  0.000000000000106   2-57   B3 DNA binding domain  
PGSC0003DMP400017257   2.35e-43   128-267   B3 DNA binding domain  
PGSC0003DMP400017857   1.82e-20   22-124   B3 DNA binding domain  
PGSC0003DMP400018858   1.1e-18   5-98   B3 DNA binding domain  
  3.34e-17   241-339   B3 DNA binding domain  
PGSC0003DMP400018859   0.000000000139   1-63   B3 DNA binding domain  
PGSC0003DMP400018860   0.000000000139   1-63   B3 DNA binding domain  
PGSC0003DMP400021619   1.96e-29   65-171   B3 DNA binding domain  
PGSC0003DMP400021707   3.27e-41   113-254   B3 DNA binding domain  
PGSC0003DMP400021708   3.4e-41   116-257   B3 DNA binding domain  
PGSC0003DMP400022399   0.000000000569   69-148   B3 DNA binding domain  
  0.0000196   232-306   B3 DNA binding domain  
PGSC0003DMP400023206   0.000000000412   2-78   B3 DNA binding domain  
PGSC0003DMP400023208   0.0000000000053   213-290   B3 DNA binding domain  
  0.000000000102   7-66   B3 DNA binding domain  
PGSC0003DMP400024048   3.53e-19   5-102   B3 DNA binding domain  
PGSC0003DMP400024049   1.08e-18   5-102   B3 DNA binding domain  
  5.3e-18   150-245   B3 DNA binding domain  
PGSC0003DMP400024050   2.55e-18   65-160   B3 DNA binding domain  
PGSC0003DMP400024204   6.93e-41   121-259   B3 DNA binding domain  
PGSC0003DMP400024934   2.75e-40   142-275   B3 DNA binding domain  
PGSC0003DMP400025461   4.71e-41   124-257   B3 DNA binding domain  
PGSC0003DMP400025462   4.19e-40   124-257   B3 DNA binding domain  
PGSC0003DMP400025605   5.1e-21   641-740   B3 DNA binding domain  
  1.55e-19   12-111   B3 DNA binding domain  
PGSC0003DMP400025606   4.71e-22   106-205   B3 DNA binding domain  
PGSC0003DMP400026163   0.000000628   238-351   B3 DNA binding domain  
PGSC0003DMP400026625   2.94e-22   22-119   B3 DNA binding domain  
PGSC0003DMP400026626   3.73e-22   22-119   B3 DNA binding domain  
PGSC0003DMP400026627   4.9e-22   22-119   B3 DNA binding domain  
  0.0000000000706   419-492   B3 DNA binding domain  
PGSC0003DMP400027661   4.51e-22   160-258   B3 DNA binding domain  
PGSC0003DMP400027662   2.16e-21   162-253   B3 DNA binding domain  
PGSC0003DMP400027742   0.0000824   23-51   B3 DNA binding domain  
PGSC0003DMP400027883   1.44e-49   115-259   B3 DNA binding domain  
PGSC0003DMP400027884   1.44e-49   114-258   B3 DNA binding domain  
PGSC0003DMP400029745   4.32e-21   240-340   B3 DNA binding domain  
  7.85e-19   25-118   B3 DNA binding domain  
PGSC0003DMP400032011   4.51e-26   220-321   B3 DNA binding domain  
  0.0000108   2-47   B3 DNA binding domain  
PGSC0003DMP400032405   0.00000000000275   5-83   B3 DNA binding domain  
PGSC0003DMP400032526   0.0000000000000235   11-86   B3 DNA binding domain  
PGSC0003DMP400032528   6.02e-31   111-186   Type II restriction endonuclease effector domain  
PGSC0003DMP400032529   5.89e-49   15-160   B3 DNA binding domain  
PGSC0003DMP400032530   0.000000000000405   7-82   B3 DNA binding domain  
PGSC0003DMP400032531   0.000000000000458   7-82   B3 DNA binding domain  
PGSC0003DMP400034841   8.24e-22   445-539   B3 DNA binding domain  
PGSC0003DMP400034979   8.83e-23   482-575   B3 DNA binding domain  
PGSC0003DMP400035159   7.32e-20   84-179   B3 DNA binding domain  
PGSC0003DMP400035160   0.000000000194   8-59   B3 DNA binding domain  
PGSC0003DMP400035877   3.34e-25   135-237   B3 DNA binding domain  
PGSC0003DMP400036010   3.92e-43   119-257   B3 DNA binding domain  
PGSC0003DMP400036011   3.92e-43   119-257   B3 DNA binding domain  
PGSC0003DMP400036012   3.4e-43   119-257   B3 DNA binding domain  
PGSC0003DMP400036415   0.0000000000000131   43-143   B3 DNA binding domain  
PGSC0003DMP400036418   0.00000000001   18-76   B3 DNA binding domain  
PGSC0003DMP400037379   4.32e-29   112-219   B3 DNA binding domain  
PGSC0003DMP400037381   3.53e-29   112-219   B3 DNA binding domain  
PGSC0003DMP400037382   4.32e-29   112-219   B3 DNA binding domain  
PGSC0003DMP400037417   8.44e-25   13-109   B3 DNA binding domain  
PGSC0003DMP400040357   1.57e-17   4-73   B3 DNA binding domain  
PGSC0003DMP400040358   1.57e-17   4-73   B3 DNA binding domain  
PGSC0003DMP400040360   4.32e-28   124-232   B3 DNA binding domain  
PGSC0003DMP400042077   4.45e-26   93-205   B3 DNA binding domain  
PGSC0003DMP400043066   1.96e-18   35-123   B3 DNA binding domain  
PGSC0003DMP400043067   1e-17   153-241   B3 DNA binding domain  
  3.92e-17   12-106   B3 DNA binding domain  
PGSC0003DMP400043392   5.49e-16   49-134   B3 DNA binding domain  
PGSC0003DMP400044696   6.08e-22   30-126   B3 DNA binding domain  
PGSC0003DMP400044697   4.51e-22   59-153   B3 DNA binding domain  
PGSC0003DMP400044698   1.24e-21   59-155   B3 DNA binding domain  
PGSC0003DMP400044699   3.92e-22   59-155   B3 DNA binding domain  
PGSC0003DMP400044701   3.14e-22   82-179   B3 DNA binding domain  
PGSC0003DMP400044702   3.34e-22   62-159   B3 DNA binding domain  
PGSC0003DMP400044703   2.16e-22   12-109   B3 DNA binding domain  
PGSC0003DMP400044704   2.16e-22   12-109   B3 DNA binding domain  
PGSC0003DMP400044705   2.75e-22   119-216   B3 DNA binding domain  
PGSC0003DMP400044706   4.12e-22   119-216   B3 DNA binding domain  
PGSC0003DMP400044708   6.47e-25   122-220   B3 DNA binding domain  
PGSC0003DMP400044803   0.00000000000000392   254-346   B3 DNA binding domain  
PGSC0003DMP400044804   0.0000000000667   59-137   B3 DNA binding domain  
PGSC0003DMP400044805   0.0000000000000216   66-152   B3 DNA binding domain  
PGSC0003DMP400044806   0.0000000000000106   269-368   B3 DNA binding domain  
  0.000000000000765   81-175   B3 DNA binding domain  
PGSC0003DMP400044807   0.00000000000000216   77-176   B3 DNA binding domain  
PGSC0003DMP400045681   1.96e-20   3-98   B3 DNA binding domain  
  0.00000000000000863   149-238   B3 DNA binding domain  
PGSC0003DMP400047332   1.51e-23   41-141   B3 DNA binding domain  
PGSC0003DMP400047333   1.51e-23   41-141   B3 DNA binding domain  
PGSC0003DMP400047334   1.71e-23   52-152   B3 DNA binding domain  
PGSC0003DMP400047335   1.51e-23   41-141   B3 DNA binding domain  
PGSC0003DMP400048339   7.72e-29   104-218   B3 DNA binding domain  
PGSC0003DMP400048917   9.03e-31   25-133   B3 DNA binding domain  
PGSC0003DMP400048918   3.14e-31   25-133   B3 DNA binding domain  
PGSC0003DMP400050216   1.7e-46   113-257   B3 DNA binding domain  
PGSC0003DMP400050217   1.7e-46   114-258   B3 DNA binding domain  
PGSC0003DMP400053785   0.0000000000126   123-224   B3 DNA binding domain  
PGSC0003DMP400054031   0.00000000000000114   2-69   B3 DNA binding domain  
  0.00000000175   226-306   B3 DNA binding domain  
PGSC0003DMP400054032   4.9e-17   31-111   B3 DNA binding domain  
  0.000000000471   347-414   B3 DNA binding domain  
PGSC0003DMP400054033   1.35e-21   29-124   B3 DNA binding domain  
  0.000000000194   374-460   B3 DNA binding domain  
PGSC0003DMP400054034   8.04e-22   29-124   B3 DNA binding domain  
PGSC0003DMP400054998   6.67e-40   157-263   B3 DNA binding domain  
PGSC0003DMP400054999   6.67e-40   156-262   B3 DNA binding domain  
PGSC0003DMP400056467   0.0000000000589   115-232   B3 DNA binding domain  
PGSC0003DMP400056863   1.45e-21   20-117   B3 DNA binding domain  
PGSC0003DMP400057277   1.96e-23   9-97   B3 DNA binding domain  
PGSC0003DMP400057446   1.53e-18   27-111   B3 DNA binding domain  
PGSC0003DMP400057492   8.83e-22   417-516   B3 DNA binding domain  
  0.00000000000000961   288-372   B3 DNA binding domain  
  0.0000000000000124   15-105   B3 DNA binding domain  
PGSC0003DMP400057509   0.0000000235   2-54   B3 DNA binding domain  
  0.000000235   184-242   B3 DNA binding domain  
PGSC0003DMP400057516   0.0000000000151   215-334   B3 DNA binding domain  
PGSC0003DMP400058124   4.71e-17   146-221   B3 DNA binding domain  
  3.34e-16   37-114   B3 DNA binding domain  
  0.00000275   115-144   B3 DNA binding domain  
PGSC0003DMP400058422   0.00000000000216   142-252   B3 DNA binding domain  
PGSC0003DMP400058490   7.65e-17   5-98   B3 DNA binding domain  
  0.0000000112   206-292   B3 DNA binding domain  
PGSC0003DMP400059414   0.00000000000116   163-270   B3 DNA binding domain  
PGSC0003DMP400059571   8.24e-16   10-100   B3 DNA binding domain  
PGSC0003DMP400059633   0.00000000000353   166-239   B3 DNA binding domain  
  0.000000000161   2-54   B3 DNA binding domain  
PGSC0003DMP400059938   1.8e-18   158-243   B3 DNA binding domain  
PGSC0003DMP400062061   0.000000000000746   81-188   B3 DNA binding domain  
PGSC0003DMP400062129   0.00000000000000314   51-132   B3 DNA binding domain  
PGSC0003DMP400062312   7.06e-16   10-109   B3 DNA binding domain  
PGSC0003DMP400062767   6.67e-16   195-285   B3 DNA binding domain  
  0.000000000157   5-65   B3 DNA binding domain  
PGSC0003DMP400062968   2.16e-24   32-128   B3 DNA binding domain  
PGSC0003DMP400063770   0.00000000216   22-116   B3 DNA binding domain  
PGSC0003DMP400063991   6.8e-17   2-74   B3 DNA binding domain  
PGSC0003DMP400064115   0.00000000235   10-79   B3 DNA binding domain  
PGSC0003DMP400064726   1.55e-16   20-118   B3 DNA binding domain  
PGSC0003DMP400065457   0.00000000000392   144-234   B3 DNA binding domain  
  0.0000000000145   2-77   B3 DNA binding domain  
PGSC0003DMP400065540   0.0000000000051   205-325   B3 DNA binding domain  
PGSC0003DMP400065634   0.000000824   148-261   B3 DNA binding domain  
PGSC0003DMP400065665   0.0000000102   170-283   B3 DNA binding domain  
PGSC0003DMP400065826   9.81e-20   246-340   B3 DNA binding domain  
  1.94e-17   3-97   B3 DNA binding domain  
  8.83e-16   125-218   B3 DNA binding domain  
PGSC0003DMP400066132   1.43e-21   15-113   B3 DNA binding domain  
PGSC0003DMP400066709   0.0000012   197-253   B3 DNA binding domain  
  0.00000392   19-58   B3 DNA binding domain  
PGSC0003DMP400066829   0.00000000175   2-54   B3 DNA binding domain  
  0.0000000155   90-153   B3 DNA binding domain  
PGSC0003DMP400067145   0.000000000000235   167-254   B3 DNA binding domain  
  0.000000255   20-64   B3 DNA binding domain  
PGSC0003DMP400067181   1.49e-23   31-128   B3 DNA binding domain  
PGSC0003DMP400067807   7.65e-19   5-98   B3 DNA binding domain  
  0.0000000216   207-267   B3 DNA binding domain  
PGSC0003DMP400068112   6.67e-21   19-117   B3 DNA binding domain  
PGSC0003DMP400068613   2.16e-16   3-80   B3 DNA binding domain  
PGSC0003DMP400068898   3.14e-21   19-117   B3 DNA binding domain  
 
Weak hits:
PGSC0003DMP400000735   0.0216   2-31   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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