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DNA-binding pseudobarrel domain superfamily domain assignments
in
Musa acuminata 22

Assignment details

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Musa acuminata 22 has 109 significant domains in 107 proteins.

     

Sequence ID   Evalue   Region   Family  
GSMUA_Achr10P04600_001   2.35e-22   118-209   B3 DNA binding domain  
GSMUA_Achr10P12070_001   1.77e-41   157-292   B3 DNA binding domain  
GSMUA_Achr10P15100_001   2.75e-39   122-268   B3 DNA binding domain  
GSMUA_Achr10P16170_001   3.4e-42   114-253   B3 DNA binding domain  
GSMUA_Achr10P16680_001   0.0000000153   40-112   B3 DNA binding domain  
GSMUA_Achr10P19690_001   2.62e-18   164-232   B3 DNA binding domain  
GSMUA_Achr10P26140_001   1.31e-41   118-231   B3 DNA binding domain  
GSMUA_Achr11P00640_001   0.00000000000000183   109-183   B3 DNA binding domain  
GSMUA_Achr11P01610_001   1.27e-48   115-257   B3 DNA binding domain  
GSMUA_Achr11P06170_001   0.00000000000000294   158-219   B3 DNA binding domain  
GSMUA_Achr11P12530_001   1.44e-17   40-110   B3 DNA binding domain  
GSMUA_Achr11P18520_001   9.55e-46   112-262   B3 DNA binding domain  
GSMUA_Achr11P22870_001   5.89e-29   84-189   B3 DNA binding domain  
GSMUA_Achr11P25770_001   1.24e-48   113-257   B3 DNA binding domain  
GSMUA_Achr1P03600_001   1.7e-29   72-182   B3 DNA binding domain  
GSMUA_Achr1P05400_001   2.49e-30   140-248   B3 DNA binding domain  
GSMUA_Achr1P08230_001   6.8e-35   147-274   B3 DNA binding domain  
GSMUA_Achr1P20000_001   2.35e-31   195-284   B3 DNA binding domain  
GSMUA_Achr1P20010_001   5.1e-36   257-400   B3 DNA binding domain  
GSMUA_Achr1P20040_001   5.49e-44   136-274   B3 DNA binding domain  
GSMUA_Achr1P21250_001   3.27e-30   147-255   B3 DNA binding domain  
GSMUA_Achr2P00400_001   0.0000000000000255   48-122   B3 DNA binding domain  
GSMUA_Achr2P04720_001   1.92e-19   125-218   B3 DNA binding domain  
GSMUA_Achr2P07840_001   9.42e-27   261-359   B3 DNA binding domain  
  1.51e-18   2-67   B3 DNA binding domain  
GSMUA_Achr2P09390_001   1.29e-23   228-324   B3 DNA binding domain  
  1.96e-21   17-99   B3 DNA binding domain  
GSMUA_Achr2P10230_001   2.49e-19   60-141   B3 DNA binding domain  
GSMUA_Achr2P18110_001   0.0000000000000628   98-193   B3 DNA binding domain  
GSMUA_Achr2P19760_001   1.57e-39   114-254   B3 DNA binding domain  
GSMUA_Achr2P22560_001   3.4e-30   129-233   B3 DNA binding domain  
GSMUA_Achr3P00120_001   2.62e-20   2-98   B3 DNA binding domain  
GSMUA_Achr3P05460_001   1.27e-38   118-277   B3 DNA binding domain  
GSMUA_Achr3P10240_001   4.05e-43   140-279   B3 DNA binding domain  
GSMUA_Achr3P19210_001   8.89e-31   37-140   B3 DNA binding domain  
GSMUA_Achr3P21100_001   6.54e-32   140-244   B3 DNA binding domain  
GSMUA_Achr3P23290_001   1.44e-47   113-257   B3 DNA binding domain  
GSMUA_Achr3P29380_001   7.06e-18   141-207   B3 DNA binding domain  
GSMUA_Achr3P31350_001   3.01e-41   202-311   B3 DNA binding domain  
GSMUA_Achr3P32440_001   1.11e-19   34-132   B3 DNA binding domain  
GSMUA_Achr4P02750_001   6.02e-38   147-273   B3 DNA binding domain  
GSMUA_Achr4P03670_001   1.31e-18   165-229   B3 DNA binding domain  
GSMUA_Achr4P06710_001   2.22e-31   140-244   B3 DNA binding domain  
GSMUA_Achr4P10590_001   5.89e-42   152-266   B3 DNA binding domain  
GSMUA_Achr4P12210_001   0.00000000000000706   25-84   B3 DNA binding domain  
GSMUA_Achr4P18240_001   1.23e-28   94-201   B3 DNA binding domain  
GSMUA_Achr4P23790_001   1.06e-19   432-538   B3 DNA binding domain  
GSMUA_Achr4P24970_001   0.0000000000000085   69-137   B3 DNA binding domain  
GSMUA_Achr4P25960_001   3.53e-48   114-257   B3 DNA binding domain  
GSMUA_Achr4P26430_001   1.19e-29   59-167   B3 DNA binding domain  
GSMUA_Achr4P30170_001   1.22e-28   52-143   B3 DNA binding domain  
GSMUA_Achr5P00590_001   3.92e-49   112-256   B3 DNA binding domain  
GSMUA_Achr5P02450_001   1.7e-49   112-256   B3 DNA binding domain  
GSMUA_Achr5P03960_001   0.000000000000183   110-181   B3 DNA binding domain  
GSMUA_Achr5P05010_001   1.57e-42   29-168   B3 DNA binding domain  
GSMUA_Achr5P09950_001   1.05e-30   143-249   B3 DNA binding domain  
GSMUA_Achr5P10220_001   0.00000000000000471   70-143   B3 DNA binding domain  
GSMUA_Achr5P12850_001   0.0000000000000159   59-133   B3 DNA binding domain  
GSMUA_Achr5P14030_001   5.89e-17   549-643   B3 DNA binding domain  
GSMUA_Achr5P14630_001   2.22e-18   81-154   B3 DNA binding domain  
GSMUA_Achr5P16260_001   1.49e-16   116-208   B3 DNA binding domain  
GSMUA_Achr5P18540_001   5.89e-19   64-133   B3 DNA binding domain  
GSMUA_Achr5P20340_001   1.7e-28   80-187   B3 DNA binding domain  
GSMUA_Achr5P26580_001   3.27e-48   113-257   B3 DNA binding domain  
GSMUA_Achr5P27930_001   1.19e-20   343-445   B3 DNA binding domain  
GSMUA_Achr6P01420_001   1.15e-30   139-245   B3 DNA binding domain  
GSMUA_Achr6P01740_001   3.01e-38   145-247   B3 DNA binding domain  
GSMUA_Achr6P06220_001   2.55e-23   125-223   B3 DNA binding domain  
GSMUA_Achr6P07390_001   1.18e-42   115-254   B3 DNA binding domain  
GSMUA_Achr6P08090_001   4.51e-42   156-292   B3 DNA binding domain  
GSMUA_Achr6P09880_001   1.31e-20   152-228   B3 DNA binding domain  
GSMUA_Achr6P12100_001   1.77e-16   41-124   B3 DNA binding domain  
GSMUA_Achr6P12780_001   1.05e-42   112-251   B3 DNA binding domain  
GSMUA_Achr6P13140_001   4.84e-30   43-146   B3 DNA binding domain  
GSMUA_Achr6P16450_001   1.47e-40   154-290   B3 DNA binding domain  
GSMUA_Achr6P18320_001   4.45e-16   72-141   B3 DNA binding domain  
GSMUA_Achr6P19850_001   2.22e-48   112-256   B3 DNA binding domain  
GSMUA_Achr6P29070_001   9.42e-42   131-271   B3 DNA binding domain  
GSMUA_Achr6P35600_001   6.8e-33   43-153   B3 DNA binding domain  
GSMUA_Achr6P36980_001   6.97e-40   130-293   B3 DNA binding domain  
GSMUA_Achr7P00120_001   3.79e-19   344-446   B3 DNA binding domain  
GSMUA_Achr7P04630_001   0.00000000000000732   33-89   B3 DNA binding domain  
GSMUA_Achr7P11000_001   3.01e-39   143-239   B3 DNA binding domain  
GSMUA_Achr7P23040_001   1.18e-22   584-680   B3 DNA binding domain  
GSMUA_Achr7P24330_001   9.42e-41   102-242   B3 DNA binding domain  
GSMUA_Achr7P25330_001   3.14e-41   145-265   B3 DNA binding domain  
GSMUA_Achr8P01750_001   1.44e-19   326-428   B3 DNA binding domain  
GSMUA_Achr8P03800_001   8.37e-20   349-452   B3 DNA binding domain  
GSMUA_Achr8P13630_001   2.09e-47   116-257   B3 DNA binding domain  
GSMUA_Achr8P14650_001   2.49e-28   134-240   B3 DNA binding domain  
GSMUA_Achr8P18070_001   1.06e-19   28-128   B3 DNA binding domain  
GSMUA_Achr8P18260_001   5.1e-30   151-257   B3 DNA binding domain  
GSMUA_Achr8P18930_001   1.83e-29   87-199   B3 DNA binding domain  
GSMUA_Achr8P23850_001   1.29e-42   161-300   B3 DNA binding domain  
GSMUA_Achr9P02600_001   7.46e-31   39-134   B3 DNA binding domain  
GSMUA_Achr9P08310_001   8.5e-43   113-253   B3 DNA binding domain  
GSMUA_Achr9P08980_001   2.62e-17   43-117   B3 DNA binding domain  
GSMUA_Achr9P14090_001   4.32e-43   124-263   B3 DNA binding domain  
GSMUA_Achr9P18170_001   1.29e-44   112-251   B3 DNA binding domain  
GSMUA_Achr9P18780_001   0.000000000000017   69-125   B3 DNA binding domain  
GSMUA_Achr9P21470_001   3.66e-19   187-252   B3 DNA binding domain  
GSMUA_Achr9P29480_001   4.84e-31   78-191   B3 DNA binding domain  
GSMUA_AchrUn_randomP04070_001   0.0000000000000451   35-95   B3 DNA binding domain  
GSMUA_AchrUn_randomP06460_001   5.49e-44   195-339   B3 DNA binding domain  
GSMUA_AchrUn_randomP06880_001   1.12e-29   141-248   B3 DNA binding domain  
GSMUA_AchrUn_randomP11300_001   2.75e-41   111-253   B3 DNA binding domain  
GSMUA_AchrUn_randomP14770_001   1.37e-39   155-291   B3 DNA binding domain  
GSMUA_AchrUn_randomP18520_001   2.35e-22   513-609   B3 DNA binding domain  
GSMUA_AchrUn_randomP18890_001   1.79e-23   112-207   B3 DNA binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

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