SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


DNA-binding pseudobarrel domain superfamily domain assignments
in
Triticum urartu 22

Assignment details

(show help)


Triticum urartu 22 has 181 significant domains in 115 proteins.

     

Sequence ID   Evalue   Region   Family  
TRIUR3_00423-P1   4.12e-18   102-197   B3 DNA binding domain  
  0.000000000000108   620-701   B3 DNA binding domain  
TRIUR3_01206-P1   0.00000108   31-144   B3 DNA binding domain  
TRIUR3_01515-P1   2.75e-27   38-123   B3 DNA binding domain  
TRIUR3_02033-P1   3.53e-20   139-237   B3 DNA binding domain  
  1.8e-18   553-653   B3 DNA binding domain  
TRIUR3_02309-P1   0.00000000000000118   58-155   B3 DNA binding domain  
  0.0000000000000334   202-293   B3 DNA binding domain  
TRIUR3_02890-P1   1.23e-38   67-202   B3 DNA binding domain  
TRIUR3_03112-P1   0.000000000000314   294-369   B3 DNA binding domain  
  0.00000196   116-209   B3 DNA binding domain  
  0.0275   60-91   B3 DNA binding domain  
TRIUR3_03303-P1   9.61e-25   10-107   B3 DNA binding domain  
TRIUR3_03692-P1   0.00000000000235   82-153   B3 DNA binding domain  
TRIUR3_03736-P1   0.0000000000192   9-92   B3 DNA binding domain  
TRIUR3_04208-P1   0.00000000000147   48-139   B3 DNA binding domain  
  0.00000000000155   384-476   B3 DNA binding domain  
  0.000000151   202-306   B3 DNA binding domain  
TRIUR3_04216-P1   1.88e-22   177-273   B3 DNA binding domain  
TRIUR3_04238-P1   2.88e-21   245-348   B3 DNA binding domain  
TRIUR3_05541-P1   0.00000000000000106   176-263   B3 DNA binding domain  
TRIUR3_05542-P1   3.73e-20   291-389   B3 DNA binding domain  
TRIUR3_05544-P1   4.71e-20   161-257   B3 DNA binding domain  
TRIUR3_05747-P1   9.42e-17   468-573   B3 DNA binding domain  
  0.00000000000000628   194-296   B3 DNA binding domain  
  0.0000000000000706   44-123   B3 DNA binding domain  
TRIUR3_05886-P1   0.00000000000000922   38-125   B3 DNA binding domain  
  0.00000000106   423-529   B3 DNA binding domain  
  0.000000373   200-305   B3 DNA binding domain  
TRIUR3_06013-P1   0.000000373   64-131   B3 DNA binding domain  
  0.000001   207-298   B3 DNA binding domain  
TRIUR3_06365-P1   1.06e-22   13-114   B3 DNA binding domain  
  9.61e-20   246-329   B3 DNA binding domain  
TRIUR3_06598-P1   1.96e-28   1157-1248   B3 DNA binding domain  
TRIUR3_07102-P1   3.34e-18   113-209   B3 DNA binding domain  
  0.00000000000216   272-357   B3 DNA binding domain  
TRIUR3_07261-P1   0.0000961   8-39   B3 DNA binding domain  
TRIUR3_09120-P1   8.63e-21   21-118   B3 DNA binding domain  
  0.0000000000000334   425-513   B3 DNA binding domain  
  0.0000000000628   234-336   B3 DNA binding domain  
TRIUR3_09121-P1   4.32e-19   19-107   B3 DNA binding domain  
TRIUR3_10132-P1   1.44e-47   264-406   B3 DNA binding domain  
TRIUR3_10266-P1   0.000000000589   401-488   B3 DNA binding domain  
  0.000451   238-310   B3 DNA binding domain  
TRIUR3_10777-P1   0.00000000000000432   20-71   B3 DNA binding domain  
TRIUR3_10778-P1   9.55e-16   10-65   B3 DNA binding domain  
TRIUR3_10779-P1   4.05e-18   4-65   B3 DNA binding domain  
TRIUR3_10947-P1   7.26e-21   129-223   B3 DNA binding domain  
TRIUR3_11236-P1   0.000000000108   193-278   B3 DNA binding domain  
TRIUR3_11727-P1   9.02e-21   7-114   B3 DNA binding domain  
TRIUR3_12004-P1   1.08e-23   22-119   B3 DNA binding domain  
  3.14e-17   273-359   B3 DNA binding domain  
TRIUR3_12005-P1   1.24e-22   95-190   B3 DNA binding domain  
  2.22e-21   301-400   B3 DNA binding domain  
TRIUR3_12102-P1   1.33e-16   155-254   B3 DNA binding domain  
TRIUR3_12103-P1   1.08e-19   120-217   B3 DNA binding domain  
TRIUR3_12386-P1   1.83e-40   171-330   B3 DNA binding domain  
TRIUR3_12424-P1   5.69e-17   2-84   B3 DNA binding domain  
  0.0000000000112   213-322   B3 DNA binding domain  
  0.0000000000179   433-543   B3 DNA binding domain  
TRIUR3_12529-P1   0.00000863   395-488   B3 DNA binding domain  
  0.0275   301-336   B3 DNA binding domain  
TRIUR3_13028-P1   1.31e-24   132-228   B3 DNA binding domain  
TRIUR3_13571-P1   4.51e-17   419-512   B3 DNA binding domain  
  1.53e-16   82-176   B3 DNA binding domain  
  1.65e-16   229-333   B3 DNA binding domain  
TRIUR3_14606-P1   4.71e-22   120-219   B3 DNA binding domain  
  2.75e-18   328-423   B3 DNA binding domain  
  1.49e-16   1-79   B3 DNA binding domain  
TRIUR3_14607-P1   8.63e-20   355-455   B3 DNA binding domain  
  1.47e-17   3-82   B3 DNA binding domain  
  1.67e-16   532-643   B3 DNA binding domain  
  0.00000000000353   194-258   B3 DNA binding domain  
TRIUR3_14746-P1   3.73e-18   155-250   B3 DNA binding domain  
  0.000000000569   6-47   B3 DNA binding domain  
TRIUR3_14814-P1   1.83e-42   163-309   B3 DNA binding domain  
TRIUR3_14925-P1   7.46e-17   2-83   B3 DNA binding domain  
  0.00000000000196   394-511   B3 DNA binding domain  
  0.00000000141   134-227   B3 DNA binding domain  
TRIUR3_14926-P1   0.0000000000000549   53-138   B3 DNA binding domain  
  0.000000000000608   542-661   B3 DNA binding domain  
  0.00000000216   359-456   B3 DNA binding domain  
  0.00000961   182-263   B3 DNA binding domain  
TRIUR3_15106-P1   3.14e-19   578-684   B3 DNA binding domain  
  1.53e-17   196-277   B3 DNA binding domain  
  0.00000000000000628   438-542   B3 DNA binding domain  
TRIUR3_16157-P1   5.89e-19   89-169   B3 DNA binding domain  
  0.0000000000144   33-92   B3 DNA binding domain  
TRIUR3_16915-P1   2.94e-18   87-182   B3 DNA binding domain  
  6.47e-16   591-691   B3 DNA binding domain  
  0.00000000000139   392-472   B3 DNA binding domain  
TRIUR3_17030-P1   0.000000000196   150-224   B3 DNA binding domain  
  0.000000000255   448-556   B3 DNA binding domain  
  0.0000000112   305-359   B3 DNA binding domain  
TRIUR3_17243-P1   4.32e-20   19-117   B3 DNA binding domain  
  8.24e-19   234-338   B3 DNA binding domain  
TRIUR3_17244-P1   4.9e-19   23-121   B3 DNA binding domain  
  3.92e-17   237-341   B3 DNA binding domain  
TRIUR3_17479-P1   0.0000000000000804   231-348   B3 DNA binding domain  
  0.000000000929   13-120   B3 DNA binding domain  
TRIUR3_17755-P1   1.09e-36   114-262   B3 DNA binding domain  
TRIUR3_17997-P1   0.000000000549   154-264   B3 DNA binding domain  
TRIUR3_18658-P1   9.16e-21   281-384   B3 DNA binding domain  
  4.71e-17   1-76   B3 DNA binding domain  
  4.84e-16   495-596   B3 DNA binding domain  
TRIUR3_18663-P1   6.47e-24   25-126   B3 DNA binding domain  
TRIUR3_19080-P1   4.51e-17   619-724   B3 DNA binding domain  
  3.14e-16   852-952   B3 DNA binding domain  
TRIUR3_19224-P1   1.05e-36   112-217   B3 DNA binding domain  
TRIUR3_19833-P1   0.0000000000000471   152-244   B3 DNA binding domain  
TRIUR3_19927-P1   0.00000000000000155   3-66   B3 DNA binding domain  
TRIUR3_20025-P1   0.0000000000000922   80-175   B3 DNA binding domain  
TRIUR3_20767-P1   3.34e-20   534-643   B3 DNA binding domain  
  2.16e-19   386-485   B3 DNA binding domain  
TRIUR3_20929-P1   0.0000883   12-60   B3 DNA binding domain  
TRIUR3_21195-P1   0.00000000000000151   76-164   B3 DNA binding domain  
  0.000000000000294   224-323   B3 DNA binding domain  
TRIUR3_21279-P1   0.000000143   132-222   B3 DNA binding domain  
TRIUR3_21370-P1   0.0000000000000353   231-320   B3 DNA binding domain  
TRIUR3_21617-P1   0.000000000133   163-260   B3 DNA binding domain  
TRIUR3_21946-P1   0.000000118   45-119   B3 DNA binding domain  
TRIUR3_22120-P1   4.32e-21   403-502   B3 DNA binding domain  
  8.83e-19   254-344   B3 DNA binding domain  
  2.55e-17   611-707   B3 DNA binding domain  
  0.00000000000000255   767-871   B3 DNA binding domain  
TRIUR3_22410-P1   1.83e-33   45-160   B3 DNA binding domain  
TRIUR3_22986-P1   0.0000000000000628   179-254   B3 DNA binding domain  
TRIUR3_23520-P1   0.000000000235   216-283   B3 DNA binding domain  
TRIUR3_24252-P1   0.000000000000373   9-76   B3 DNA binding domain  
  0.00000000116   144-249   B3 DNA binding domain  
TRIUR3_24313-P1   5.3e-22   252-346   B3 DNA binding domain  
  4.9e-20   15-123   B3 DNA binding domain  
TRIUR3_24520-P1   9.81e-42   103-219   B3 DNA binding domain  
TRIUR3_24820-P1   0.000000000000902   10-81   B3 DNA binding domain  
TRIUR3_24850-P1   3.53e-30   3-111   B3 DNA binding domain  
TRIUR3_24851-P1   2.22e-28   392-500   B3 DNA binding domain  
TRIUR3_24950-P1   3.53e-19   34-107   B3 DNA binding domain  
TRIUR3_25576-P1   1.14e-19   22-117   B3 DNA binding domain  
  6.47e-18   428-526   B3 DNA binding domain  
  1.02e-17   174-278   B3 DNA binding domain  
TRIUR3_25641-P1   3.53e-16   259-353   B3 DNA binding domain  
  0.0432   99-126   B3 DNA binding domain  
TRIUR3_25737-P1   3.34e-21   16-114   B3 DNA binding domain  
  0.00000000000000196   234-335   B3 DNA binding domain  
TRIUR3_25750-P1   2.22e-42   173-313   B3 DNA binding domain  
TRIUR3_26420-P1   1.14e-27   244-355   B3 DNA binding domain  
TRIUR3_26567-P1   5.3e-16   2-81   B3 DNA binding domain  
  0.00000000000000118   150-254   B3 DNA binding domain  
  0.00000000000000314   379-481   B3 DNA binding domain  
TRIUR3_26890-P1   5.3e-23   273-367   B3 DNA binding domain  
TRIUR3_27457-P1   1.44e-16   149-237   B3 DNA binding domain  
TRIUR3_27886-P1   2.35e-29   156-250   B3 DNA binding domain  
TRIUR3_28399-P1   0.00000000000000785   273-347   B3 DNA binding domain  
TRIUR3_28704-P1   2.35e-36   73-213   B3 DNA binding domain  
TRIUR3_28877-P1   0.00000000000000165   495-602   B3 DNA binding domain  
TRIUR3_28948-P1   3.14e-48   52-196   B3 DNA binding domain  
TRIUR3_29312-P1   0.0000000000471   755-850   B3 DNA binding domain  
TRIUR3_29627-P1   7.06e-16   13-104   B3 DNA binding domain  
  0.000000000000334   395-508   B3 DNA binding domain  
  0.000000000000942   206-312   B3 DNA binding domain  
TRIUR3_29732-P1   4.19e-26   1-90   B3 DNA binding domain  
TRIUR3_30460-P1   0.00000334   4-62   B3 DNA binding domain  
TRIUR3_30996-P1   6.08e-23   93-188   B3 DNA binding domain  
  0.000000196   569-637   B3 DNA binding domain  
TRIUR3_32260-P1   4.12e-20   230-326   B3 DNA binding domain  
  6.08e-18   20-118   B3 DNA binding domain  
  6.08e-17   446-551   B3 DNA binding domain  
TRIUR3_32580-P1   6.28e-17   222-317   B3 DNA binding domain  
TRIUR3_32597-P1   9.94e-26   112-212   B3 DNA binding domain  
TRIUR3_32813-P1   0.0000133   76-134   B3 DNA binding domain  
TRIUR3_32822-P1   5.69e-17   36-124   B3 DNA binding domain  
TRIUR3_33045-P1   2.22e-43   82-221   B3 DNA binding domain  
TRIUR3_33140-P1   0.0000000667   37-66   B3 DNA binding domain  
TRIUR3_33205-P1   0.000000000235   219-275   B3 DNA binding domain  
TRIUR3_33405-P1   1.83e-17   70-119   B3 DNA binding domain  
TRIUR3_33501-P1   1.16e-44   101-241   B3 DNA binding domain  
TRIUR3_33948-P1   9.16e-44   114-236   B3 DNA binding domain  
TRIUR3_34439-P1   0.000000000000255   324-416   B3 DNA binding domain  
  0.00000000000922   892-953   B3 DNA binding domain  
TRIUR3_34518-P1   0.000000000000124   151-221   B3 DNA binding domain  
  0.000000549   86-148   B3 DNA binding domain  
TRIUR3_35130-P1   1.22e-20   138-237   B3 DNA binding domain  
  9.42e-17   343-440   B3 DNA binding domain  
  0.0000000000000196   1-79   B3 DNA binding domain  
  0.00981   506-540   B3 DNA binding domain  
TRIUR3_35254-P1   6.8e-45   41-196   B3 DNA binding domain  
 
Weak hits:
TRIUR3_03863-P1   0.00161   107-189   B3 DNA binding domain  
TRIUR3_04453-P1   0.000667   42-117   B3 DNA binding domain  
TRIUR3_07621-P1   0.00053   107-163   B3 DNA binding domain  
TRIUR3_07703-P1   0.00451   129-159   B3 DNA binding domain  
TRIUR3_10030-P1   0.0549   50-99   B3 DNA binding domain  
TRIUR3_10509-P1   0.00562   118-154   B3 DNA binding domain  
TRIUR3_14733-P1   0.000161   59-116   B3 DNA binding domain  
TRIUR3_19017-P1   0.00177   178-241   B3 DNA binding domain  
TRIUR3_20032-P1   0.00746   1-64   B3 DNA binding domain  
TRIUR3_20094-P1   0.0204   190-240   B3 DNA binding domain  
TRIUR3_20374-P1   0.00314   144-229   B3 DNA binding domain  
TRIUR3_23398-P1   0.00122   21-57   B3 DNA binding domain  
TRIUR3_24032-P1   0.0726   25-57   B3 DNA binding domain  
TRIUR3_26066-P1   0.00726   410-491   B3 DNA binding domain  
TRIUR3_27962-P1   0.0053   109-168   B3 DNA binding domain  
TRIUR3_28416-P1   0.000334   2-77   B3 DNA binding domain  
TRIUR3_31057-P1   0.000255   18-54   B3 DNA binding domain  
TRIUR3_31270-P1   0.00294   54-109   B3 DNA binding domain  
TRIUR3_32155-P1   0.00196   304-349   B3 DNA binding domain  
TRIUR3_34834-P1   0.00177   1277-1354   B3 DNA binding domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a DNA-binding pseudobarrel domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   57946 57946
No Yes Selaginella moellendorffii   61 54
No Yes Pinus taeda Loblolly pine 54 49
No Yes Picea abies Norway spruce 29 27
No Yes Eucalyptus grandis v201 Rose gum 189 148
No Yes Theobroma cacao B97-61/B2 v1 Cacao 150 125
No Yes Gossypium raimondii v221   404 319
No Yes Citrus clementina v165   159 123
No Yes Citrus sinensis v154 Sweet orange 172 150
No Yes Thellungiella halophila v173   198 126
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 211
No Yes Capsella rubella v183   179 122
No Yes Arabidopsis lyrata Lyrate rockcress 225 140
No Yes Arabidopsis thaliana 10 Thale cress 224 149
No Yes Carica papaya Papaya 75 59
No Yes Medicago truncatula Barrel medic 363 273
No Yes Phaseolus vulgaris v186 French bean 133 99
No Yes Glycine max v109 Soybean 186 164
No Yes Cucumis sativus v122 Cucumber 105 89
No Yes Fragaria vesca Wild strawberry 202 132
No Yes Malus domestica v196 Apple 188 146
No Yes Prunus persica v139 Peach 143 114
No Yes Linum usitatissimum v200 Flax 224 162
No Yes Manihot esculenta v147 Cassava 184 148
No Yes Populus trichocarpa v156 Black cottonwood 212 195
No Yes Vitis vinifera Wine grape 61 50
No Yes Mimulus guttatus v140 Spotted monkey flower 118 99
No Yes Solanum lycopersicum v.2.3 Tomato 164 113
No Yes Solanum tuberosum Potato 226 171
No Yes Actinidia chinensis Hongyang   150 115
No Yes Aquilegia coerulea v195   183 147
No Yes Triticum urartu 22   181 115
No Yes Triticum aestivum 22 Bread wheat 237 190
No Yes Aegilops tauschii 22   232 142
No Yes Brachypodium distachyon Stiff brome 128 95
No Yes Oryza barthii 22 African wild rice 177 124
No Yes Oryza meridionalis 22   193 117
No Yes Oryza glumaepatula 22   181 126
No Yes Oryza glaberrima African rice 109 80
No Yes Oryza punctata 22   172 112
No Yes Oryza nivara 22   190 137
No Yes Oryza brachyantha 22 Malo sina 96 77
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 173 134
No Yes Oryza sativa v193 Rice 168 132
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 91 82
No Yes Panicum virgatum v202 Switchgrass 293 217
No Yes Setaria italica v164 Foxtail millet 153 114
No Yes Zea mays subsp. mays Maize 157 141
No Yes Zea mays v181 Maize 171 153
No Yes Sorghum bicolor Sorghum 129 94
No Yes Musa balbisiana Balbis banana 117 112
No Yes Musa acuminata 22 Wild Malaysian banana 109 107
No Yes Amborella trichopoda 22   54 49
No Yes Physcomitrella patens   68 53
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   8 8
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 140 116
No Yes Hordeum vulgare 22 Domesticated barley 308 227
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 135 95
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Lotus japonicus (Early assembly)   83 76
No Yes Malus x domestica (Duplicate) Apple 188 146
No Yes Ricinus communis (Early assembly) Castor bean 89 70
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   217 160
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 157 111
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 164 113
No Yes Phoenix dactylifera (Early draft) Date palm 47 39
No Yes Arabidopsis thaliana 10 Thale cress 188 121
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21482 16439
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1243 923
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   19880 14856
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   34 34
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   28 28
No Yes TargetDB (Targets)   78 63
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]