SUPERFAMILY 1.75 HMM library and genome assignments server

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Creatininase superfamily domain assignments
in
Vibrio vulnificus YJ016


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Select to display   Genome       Domains   Proteins
No Yes ALL   39928 39928
No Yes Amphimedon queenslandica   1 1
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Cyanophora paradoxa   3 3
No Yes Ectocarpus siliculosus   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   2 2
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Trichodesmium erythraeum IMS101   2 2
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   3 3
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   2 2
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   1 1
No Yes Conexibacter woesei DSM 14684   6 6
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Rubrobacter xylanophilus DSM 9941   3 3
No Yes Ilumatobacter coccineus   3 3
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Modestobacter marinus   2 2
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Streptomyces coelicolor A3(2)   2 2
No Yes Streptomyces bingchenggensis BCW-1   3 3
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   3 3
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Gordonia sp. KTR9   2 2
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   2 2
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Nocardia cyriacigeorgica GUH-2   3 3
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium massiliense str. GO 06   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   2 2
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Corynebacterium variabile DSM 44702   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Microbacterium testaceum StLB037   2 2
No Yes Arthrobacter aurescens TC1   2 2
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   4 4
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   2 2
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Megamonas hypermegale   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes Sulfobacillus acidophilus DSM 10332   2 2
No Yes Oscillibacter valericigenes Sjm18-20   2 2
No Yes butyrate-producing bacterium SS3/4   3 3
No Yes Thermincola potens JR   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Acetobacterium woodii DSM 1030   2 2
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Roseburia intestinalis   1 1
No Yes Clostridium tetani E88   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   2 2
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   3 3
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Gemmatimonas aurantiaca T-27   4 4
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Bacteroides sp. CF50   2 2
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Zobellia galactanivorans   3 3
No Yes Muricauda ruestringensis DSM 13258   1 1
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Fretibacterium fastidiosum   2 2
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Spirochaeta smaragdinae DSM 11293   5 5
No Yes Sphaerochaeta pleomorpha str. Grapes   2 2
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema primitia ZAS-2   2 2
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Thermodesulfobacterium sp. OPB45   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Persephonella marina EX-H1   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Caldisericum exile AZM16c01   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Sebaldella termitidis ATCC 33386   2 2
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   1 1
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Pelobacter propionicus DSM 2379   1 1
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Haliangium ochraceum DSM 14365   2 2
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Thiomonas arsenitoxydans   1 1
No Yes Burkholderia phymatum STM815   2 2
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   1 1
No Yes Burkholderia ambifaria AMMD   2 2
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Verminephrobacter eiseniae EF01-2   4 4
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   2 2
No Yes Polaromonas naphthalenivorans CJ2   2 2
No Yes Variovorax paradoxus S110   3 3
No Yes Rhodoferax ferrireducens T118   1 1
No Yes Acidovorax ebreus TPSY   1 1
No Yes Acidovorax sp. KKS102   2 2
No Yes Acidovorax sp. JS42   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Sideroxydans lithotrophicus ES-1   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Maricaulis maris MCS10   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   2 2
No Yes Pseudovibrio sp. FO-BEG1   2 2
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ketogulonicigenium vulgare Y25   4 4
No Yes Ketogulonigenium vulgarum WSH-001   4 4
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Paracoccus denitrificans PD1222   2 2
No Yes Tistrella mobilis KA081020-065   2 2
No Yes Rhodospirillum centenum SW   2 2
No Yes Rhodospirillum rubrum F11   2 2
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   2 2
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Acetobacter pasteurianus IFO 3283-01   1 1
No Yes Polymorphum gilvum SL003B-26A1   2 2
No Yes Starkeya novella DSM 506   3 3
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium chloromethanicum CM4   3 3
No Yes Methylobacterium extorquens AM1   3 3
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   3 3
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   2 2
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   3 3
No Yes Agrobacterium sp. H13-3   2 2
No Yes Agrobacterium vitis S4   3 3
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   4 4
No Yes Mesorhizobium opportunistum WSM2075   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   3 3
No Yes Mesorhizobium loti MAFF303099   3 3
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Pelagibacterium halotolerans B2   2 2
No Yes Hyphomicrobium sp. MC1   3 3
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Chromohalobacter salexigens DSM 3043   1 1
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Pantoea sp. At-9b   2 2
No Yes Erwinia billingiae Eb661   2 2
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   2 2
No Yes Acidilobus saccharovorans 345-15   2 2
No Yes Pyrolobus fumarii 1A   1 1
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Aeropyrum pernix K1   1 1
No Yes Ignicoccus hospitalis KIN4/I   3 3
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   1 1
No Yes Metallosphaera cuprina Ar-4   1 1
No Yes Metallosphaera sedula DSM 5348   1 1
No Yes Acidianus hospitalis W1   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Thermofilum sp. 1910b   2 2
No Yes Thermofilum pendens Hrk 5   2 2
No Yes Vulcanisaeta moutnovskia 768-28   2 2
No Yes Vulcanisaeta distributa DSM 14429   2 2
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   2 2
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Thermoproteus uzoniensis 768-20   2 2
No Yes Thermoproteus tenax Kra 1   2 2
No Yes halophilic archaeon DL31   6 6
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanopyrus kandleri AV19   1 1
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   2 2
No Yes Salinarchaeum sp. Harcht-Bsk1   4 4
No Yes Halopiger xanaduensis SH-6   2 2
No Yes Haloterrigena turkmenica DSM 5511   6 6
No Yes Natrinema sp. J7-2   3 3
No Yes Natrialba magadii ATCC 43099   3 3
No Yes Halorubrum lacusprofundi ATCC 49239   3 3
No Yes Haloquadratum walsbyi DSM 16790   2 2
No Yes Halogeometricum borinquense DSM 11551   4 4
No Yes Haloferax mediterranei ATCC 33500   3 3
No Yes Haloferax volcanii DS2   5 5
No Yes Halomicrobium mukohataei DSM 12286   2 2
No Yes Halorhabdus utahensis DSM 12940   2 2
No Yes Natronomonas pharaonis DSM 2160   2 2
No Yes Haloarcula hispanica ATCC 33960   4 4
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halalkalicoccus jeotgali B3   5 5
No Yes Halobacterium salinarum R1   2 2
No Yes Halobacterium sp. NRC-1   2 2
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Methanococcus aeolicus Nankai-3   1 1
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanococcus voltae A3   1 1
No Yes Methanococcus vannielii SB   1 1
No Yes Methanothermus fervidus DSM 2088   1 1
No Yes Methanothermobacter marburgensis str. Marburg   1 1
No Yes Methanothermobacter thermautotrophicus str. Delta H   1 1
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   2 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I   2 2
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Cyanobium gracile PCC 6307   2 2
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   2 2
No Yes Synechococcus sp. RCC307   2 2
No Yes Synechococcus sp. CC9605   2 2
No Yes Synechococcus sp. WH 8102   2 2
No Yes Synechococcus sp. WH 7803   2 2
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   2 2
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   2 2
No Yes Prochlorococcus marinus str. MIT 9313   2 2
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   2 2
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   2 2
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Arthrospira platensis NIES-39   2 2
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   2 2
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   2 2
No Yes Cyanobacterium stanieri PCC 7202   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   4 4
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis mediterranei S699   3 3
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Mycobacterium sp. MOTT36Y   3 3
No Yes Mycobacterium sp. JDM601   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   2 2
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium yongonense 05-1390   2 2
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Mycobacterium kansasii ATCC 12478   2 2
No Yes Corynebacterium callunae DSM 20147   1 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   2 2
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Sulfobacillus acidophilus TPY   2 2
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   3 3
No Yes Paenibacillus mucilaginosus K02   3 3
No Yes Listeria monocytogenes EGD sequence   2 2
No Yes Listeria monocytogenes N53-1   2 2
No Yes Listeria monocytogenes La111   2 2
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   2 2
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC7179   2 2
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   2 2
No Yes Listeria monocytogenes 08-5923   2 2
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   2 2
No Yes Listeria monocytogenes J0161   2 2
No Yes Listeria monocytogenes Finland 1998   2 2
No Yes Listeria monocytogenes FSL R2-561   2 2
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Thermotoga maritima MSB8   1 1
No Yes Leptospirillum ferriphilum ML-04   2 2
No Yes Geobacter sp. M18   1 1
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   3 3
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Caulobacter crescentus CB15   1 1
No Yes Octadecabacter antarcticus 307   2 2
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Rhodospirillum rubrum ATCC 11170   2 2
No Yes Gluconobacter oxydans H24   2 2
No Yes Acetobacter pasteurianus 386B   1 1
No Yes Acetobacter pasteurianus IFO 3283-12   1 1
No Yes Acetobacter pasteurianus IFO 3283-01-42C   1 1
No Yes Acetobacter pasteurianus IFO 3283-32   1 1
No Yes Acetobacter pasteurianus IFO 3283-26   1 1
No Yes Acetobacter pasteurianus IFO 3283-22   1 1
No Yes Acetobacter pasteurianus IFO 3283-07   1 1
No Yes Acetobacter pasteurianus IFO 3283-03   1 1
No Yes Methylobacterium extorquens DM4   3 3
No Yes Methylobacterium extorquens PA1   3 3
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   2 2
No Yes Rhizobium etli bv. mimosae str. Mim1   2 2
No Yes Rhizobium tropici CIAT 899   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Liberibacter crescens BT-1   1 1
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   1 1
No Yes Candidatus Liberibacter americanus str. Sao Paulo   1 1
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   2 2
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   2 2
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Caldisphaera lagunensis DSM 15908   2 2
No Yes Aeropyrum camini SY1 = JCM 12091   1 1
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   1 1
No Yes Halovivax ruber XH-70   3 3
No Yes Natrinema pellirubrum DSM 15624   4 4
No Yes Natronococcus occultus SP4   4 4
No Yes Natronobacterium gregoryi SP2   2 2
No Yes Haloquadratum walsbyi C23   2 2
No Yes Halorhabdus tiamatea SARL4B   2 2
No Yes Natronomonas moolapensis 8.8.11   4 4
No Yes Haloarcula hispanica N601   4 4
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Methanococcus maripaludis S2   1 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes 1_050719N (meta-genome)   11 11
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_050719S (meta-genome)   11 11
No Yes 3_Below_base_of_euphotic (meta-genome)   7 7
No Yes 4_050719Q (meta-genome)   6 6
No Yes 4_Deep_abyss (meta-genome)   3 3
No Yes 5_050719P (meta-genome)   6 6
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 3
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   4 4
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   8 8
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   8 8
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 2
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   6 6
No Yes Combined (meta-genome)   14 14
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   13 13
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   8 8
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   6 6
No Yes Dump bottom (Dump bottom) (meta-genome)   51 51
No Yes Dump top (Dump top) (meta-genome)   49 49
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   10 10
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   11 11
No Yes Fungus garden combined (combined) (meta-genome)   7 7
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   13 13
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   29 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   7 7
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   19 19
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   18 18
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   53 52
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   18 18
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   11 11
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   7 6
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   11 11
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   38 38
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   12 12
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   7 7
No Yes NCBI 2017_08 genome   25240 25221
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   18 18
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   4 4
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 13
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   18 18
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   69 69
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   84 84
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   51 51
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   51 51
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   48 48
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   55 55
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   15 15
No Yes STRING v9.0.5 (STRING)   398 398
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   9 9
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   43 43
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   12 12
No Yes Uniprot 2018_03 genome   10351 10297
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   15 15
No Yes Global Ocean Sampling Expedition (GOS)   568 568
No Yes NCBI plasmid sequences (Plasmids)   44 44
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   87 87
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   246 246
No Yes TargetDB (Targets)   26 26

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