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Steroid-binding domain family domain assignments
in
all genomes

Assignment details

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25 selected genomes have 38 significant domains in 38 proteins.

Showing genomes 1 to 25 of 67
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Picea abies has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
MA_3440g0010   4.71e-32   0.0000203   20-120   1t0g A:  
MA_56416g0010   3.14e-32   0.0000212   48-149   1t0g A:  
 
Weak hits:
MA_82655g0010   6.28e-28   0.00014   57-162   1t0g A:  

Eucalyptus grandis v201 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Eucgr.C04037.1|PACid:23573423   5.1e-31   0.0000186   2-99   1t0g A:  
 
Weak hits:
Eucgr.K00245.1|PACid:23601702   2.26e-28   0.00015   62-167   1t0g A:  
Eucgr.K01331.1|PACid:23602842   4.58e-25   0.00053   66-167   1t0g A:  
Eucgr.K01553.1|PACid:23603069   3.09e-26   0.00016   70-173   1t0g A:  
Eucgr.L01881.1|PACid:23606737   0.0000000116   0.01   62-102   1t0g A:  

Theobroma cacao B97-61/B2 v1 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Tc03_g007470   1.44e-25   0.0000923   54-156   1t0g A:  
Tc09_g001170   8.24e-30   0.0000192   64-164   1t0g A:  
 
Weak hits:
Tc01_g014860   3.93e-26   0.00034   27-130   1t0g A:  
Tc03_g020750   7.74e-29   0.00015   62-167   1t0g A:  

Gossypium raimondii v221 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Gorai.006G192800.1|PACid:26833523   4.45e-25   0.0000881   54-156   1t0g A:  
Gorai.010G244800.1|PACid:26756302   2.22e-30   0.000023   57-155   1t0g A:  
 
Weak hits:
Gorai.005G203300.1|PACid:26805124   0.0000000000108   0.0023   122-197   1t0g A:  
Gorai.006G048000.1|PACid:26834219   5.95e-28   0.00014   63-167   1t0g A:  
Gorai.007G262800.1|PACid:26781706   0.0000000000000864   0.0023   59-127   1t0g A:  
Gorai.008G096000.1|PACid:26818713   8.07e-21   0.00072   33-153   1t0g A:  
Gorai.008G096000.2|PACid:26818715   1.55e-25   0.0004   33-132   1t0g A:  
Gorai.008G096000.3|PACid:26818714   1.2e-21   0.00054   33-149   1t0g A:  
Gorai.008G278100.1|PACid:26818314   1.31e-28   0.00017   63-168   1t0g A:  
Gorai.008G278100.2|PACid:26818315   1.31e-28   0.00017   63-168   1t0g A:  

Citrus clementina v165 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
clementine0.9_026364m|PACid:19251945   5.89e-32   0.0000132   2-99   1t0g A:  
 
Weak hits:
clementine0.9_020034m|PACid:19261997   4.71e-26   0.00042   33-136   1t0g A:  
clementine0.9_020268m|PACid:19275311   1.83e-27   0.00015   63-167   1t0g A:  
clementine0.9_021457m|PACid:19278475   4.71e-27   0.00014   92-194   1t0g A:  
clementine0.9_022140m|PACid:19278476   3.93e-27   0.00014   78-180   1t0g A:  

Citrus sinensis v154 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
orange1.1g034288m|PACid:18108965   5.89e-32   0.0000132   2-99   1t0g A:  
 
Weak hits:
orange1.1g026393m|PACid:18101247   1.83e-27   0.00015   63-167   1t0g A:  
orange1.1g028815m|PACid:18122608   5.23e-27   0.00015   79-180   1t0g A:  
orange1.1g029303m|PACid:18122609   4.28e-27   0.00015   71-172   1t0g A:  
orange1.1g029324m|PACid:18122610   4.28e-27   0.00015   71-172   1t0g A:  
orange1.1g039896m|PACid:18105391   4.71e-26   0.00042   33-136   1t0g A:  
orange1.1g045369m|PACid:18097944   0.0000000632   0.012   78-115   1t0g A:  

Thellungiella halophila v173 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Thhalv10000388m|PACid:20208290   3.14e-31   0.00000606   2-99   1t0g A:  
 
Weak hits:
Thhalv10010688m|PACid:20207075   4.71e-28   0.00016   62-167   1t0g A:  
Thhalv10014624m|PACid:20206553   1.03e-28   0.00016   66-170   1t0g A:  
Thhalv10026107m|PACid:20195280   7.85e-26   0.00033   33-135   1t0g A:  

Brassica rapa Chiifu-401 1.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Bra032055   1.83e-30   0.00000634   2-99   1t0g A:  
 
Weak hits:
Bra018028   9.99e-29   0.00015   62-167   1t0g A:  
Bra019571   2.9e-21   0.00044   1-78   1t0g A:  
Bra028301   6.28e-29   0.00015   67-170   1t0g A:  
Bra037079   1.31e-26   0.00037   32-136   1t0g A:  

Capsella rubella v183 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Carubv10024390m|PACid:20901749   2.49e-31   0.00000664   2-99   1t0g A:  
 
Weak hits:
Carubv10005613m|PACid:20897323   6.15e-26   0.00033   34-137   1t0g A:  
Carubv10017968m|PACid:20887695   1.2e-27   0.00015   62-167   1t0g A:  
Carubv10027102m|PACid:20914068   1.7e-28   0.00016   67-170   1t0g A:  

Arabidopsis lyrata has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
jgi|Araly1|901094|scaffold_400595.1   4.71e-32   0.0000047   2-99   1t0g A:  
 
Weak hits:
jgi|Araly1|485244|fgenesh2_kg.5__1236__AT3G48890.1   8.77e-28   0.00015   62-167   1t0g A:  
jgi|Araly1|495293|fgenesh2_kg.8__1109__AT5G52240.1   1.7e-28   0.00016   67-170   1t0g A:  
jgi|Araly1|859302|Al_scaffold_0007_2801   2.62e-25   0.00038   35-138   1t0g A:  

Arabidopsis thaliana 10 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
AT2G24940.1   4.06e-32   0.00000443   2-99   1t0g A:  
 
Weak hits:
AT3G48890.1   7.97e-28   0.00015   62-167   1t0g A:  
AT4G14965.1   3.66e-25   0.0003   35-138   1t0g A:  
AT5G52240.1   1.31e-28   0.00016   67-170   1t0g A:  
AT5G52240.2   7.2e-29   0.00016   67-170   1t0g A:  

Carica papaya has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
evm.TU.supercontig_148.34   1.02e-31   0.0000144   2-99   1t0g A:  
 
Weak hits:
evm.TU.supercontig_107.39   1.9e-28   0.00015   60-165   1t0g A:  

Medicago truncatula has 4 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Medtr3g105860.1   5.89e-31   0.0000167   2-99   1t0g A:  
Medtr6g027160.1   4.4e-26   0.0000985   73-174   1t0g A:  
Medtr6g027160.2   4.4e-26   0.0000985   73-174   1t0g A:  
Medtr6g027160.3   4.4e-26   0.0000985   73-174   1t0g A:  
 
Weak hits:
Medtr1g100727.1   1.07e-28   0.00016   65-170   1t0g A:  
Medtr3g081290.1   1.05e-26   0.00048   28-131   1t0g A:  
Medtr6g027060.1   0.000000262   0.001   25-86   1t0g A:  
Medtr6g027130.1   0.0379   0.0034   49-100   1t0g A:  
Medtr6g054890.1   7.07e-27   0.00018   66-168   1t0g A:  
Medtr6g054890.2   7.07e-27   0.00018   66-168   1t0g A:  

Phaseolus vulgaris v186 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Phvulv091028004m|PACid:23539218   1.57e-32   0.0000148   3-99   1t0g A:  
 
Weak hits:
Phvulv091009133m|PACid:23541219   3.05e-27   0.00017   64-167   1t0g A:  
Phvulv091017295m|PACid:23549781   1.15e-26   0.00011   69-171   1t0g A:  
Phvulv091023339m|PACid:23553728   7.39e-28   0.00015   62-167   1t0g A:  
Phvulv091028532m|PACid:23556659   4.58e-25   0.00049   33-134   1t0g A:  

Glycine max v109 has 5 significant domains in 5 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Glyma02g21120.1|PACid:16248511   1.23e-16   0.0000996   1-70   1t0g A:  
Glyma04g06340.1|PACid:16255052   1.18e-31   0.000015   2-99   1t0g A:  
Glyma06g06390.1|PACid:16261923   5.76e-32   0.0000149   11-110   1t0g A:  
Glyma10g00860.1|PACid:16278147   1.83e-19   0.0001   1-70   1t0g A:  
Glyma19g15780.1|PACid:16312423   6.15e-27   0.0001   68-171   1t0g A:  
 
Weak hits:
Glyma01g27410.1|PACid:16244582   4.11e-16   0.00012   1-70   1t0g A:  
Glyma09g25940.1|PACid:16276259   4.14e-27   0.00016   65-168   1t0g A:  
Glyma10g38150.1|PACid:16281370   4.04e-28   0.00013   63-168   1t0g A:  
Glyma12g15710.1|PACid:16287592   0.00000000000000654   0.00012   1-70   1t0g A:  
Glyma13g10750.1|PACid:16290247   1.31e-25   0.0004   33-134   1t0g A:  
Glyma15g41780.1|PACid:16300762   0.000000916   0.013   66-105   1t0g A:  
Glyma17g19480.1|PACid:16306083   0.0000000000036   0.00014   1-66   1t0g A:  
Glyma19g15780.2|PACid:16312424   0.0000000206   0.0084   68-108   1t0g A:  
Glyma20g15970.1|PACid:16315987   8.64e-25   0.00035   33-134   1t0g A:  
Glyma20g29660.1|PACid:16317285   7.35e-28   0.00013   64-169   1t0g A:  

Cucumis sativus v122 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Cucsa.162900.1|PACid:16965754   4.71e-30   0.0000205   3-99   1t0g A:  
Cucsa.162910.1|PACid:16965755   1.05e-26   0.0000561   4-101   1t0g A:  
 
Weak hits:
Cucsa.058560.1|PACid:16954699   2.36e-24   0.00048   1-99   1t0g A:  
Cucsa.313970.1|PACid:16977077   2.84e-27   0.00015   60-165   1t0g A:  
Cucsa.337260.1|PACid:16978580   3.4e-25   0.00013   81-179   1t0g A:  

Fragaria vesca has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gene14994   2.49e-30   0.0000173   672-771   1t0g A:  
 
Weak hits:
gene02782   1.18e-23   0.0002   75-167   1t0g A:  
gene13290   8.45e-29   0.00016   60-165   1t0g A:  
gene14996   0.000497   0.001   127-167   1t0g A:  
gene24277   1.6e-18   0.0008   30-129   1t0g A:  

Malus domestica v196 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
MDP0000266448|PACid:22626569   1.44e-31   0.0000144   2-98   1t0g A:  
 
Weak hits:
MDP0000128949|PACid:22650519   0.00000000000822   0.0023   30-83   1t0g A:  
MDP0000132930|PACid:22649729   0.00000000000105   0.00062   4-68   1t0g A:  
MDP0000132934|PACid:22629138   0.00000000000105   0.00062   4-68   1t0g A:  
MDP0000152585|PACid:22620104   7.2e-28   0.00015   61-165   1t0g A:  
MDP0000156145|PACid:22648368   3.27e-25   0.00021   85-184   1t0g A:  
MDP0000156658|PACid:22636476   9.55e-17   0.00067   211-297   1t0g A:  
MDP0000171672|PACid:22630022   0.00000000114   0.0024   159-213   1t0g A:  
MDP0000255731|PACid:22636080   0.000575   0.0042   94-159   1t0g A:  
MDP0000264722|PACid:22670484   0.0000000000000733   0.00095   222-304   1t0g A:  
MDP0000264843|PACid:22654807   0.00000000000000916   0.00081   150-236   1t0g A:  
MDP0000266215|PACid:22626075   0.0000000000000602   0.00095   240-323   1t0g A:  
MDP0000268977|PACid:22648054   0.00115   0.0071   61-123   1t0g A:  
MDP0000343864|PACid:22679984   0.00000654   0.016   56-91   1t0g A:  
MDP0000565184|PACid:22668706   0.00000288   0.015   85-120   1t0g A:  
MDP0000680569|PACid:22652772   3.27e-25   0.00021   85-184   1t0g A:  
MDP0000778798|PACid:22645010   0.00000281   0.013   85-119   1t0g A:  
MDP0000896377|PACid:22681127   1.22e-27   0.00012   61-165   1t0g A:  

Prunus persica v139 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ppa013839m|PACid:17640858   1.96e-31   0.0000149   2-99   1t0g A:  
 
Weak hits:
ppa010670m|PACid:17668979   1.02e-25   0.00054   30-133   1t0g A:  
ppa011573m|PACid:17643974   1.55e-28   0.00013   61-165   1t0g A:  
ppa011693m|PACid:17648226   3.05e-25   0.00016   76-180   1t0g A:  
ppa011700m|PACid:17648225   3.05e-25   0.00016   76-180   1t0g A:  

Linum usitatissimum v200 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Lus10002241|PACid:23172028   1.96e-32   0.0000144   2-99   1t0g A:  
Lus10029567|PACid:23152141   1.18e-31   0.0000149   311-414   1t0g A:  
 
Weak hits:
Lus10005746|PACid:23169816   5.42e-28   0.00015   61-166   1t0g A:  
Lus10014988|PACid:23152815   8.66e-28   0.00015   61-166   1t0g A:  
Lus10018026|PACid:23147886   3.01e-24   0.00058   56-159   1t0g A:  
Lus10027449|PACid:23144620   5.42e-28   0.00015   61-166   1t0g A:  
Lus10034799|PACid:23142152   0.00000000000000903   0.001   5-56   1t0g A:  
Lus10038356|PACid:23158227   8.37e-27   0.00017   65-170   1t0g A:  
Lus10038868|PACid:23150508   1.81e-27   0.00015   61-166   1t0g A:  
Lus10042022|PACid:23153761   1.18e-18   0.00063   35-154   1t0g A:  

Manihot esculenta v147 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
cassava4.1_019974m|PACid:17985793   3.66e-31   0.0000114   2-99   1t0g A:  
 
Weak hits:
cassava4.1_011977m|PACid:17985529   1.7e-27   0.00016   169-273   1t0g A:  
cassava4.1_014795m|PACid:17961223   2.49e-25   0.00034   37-139   1t0g A:  
cassava4.1_016116m|PACid:17960774   9.71e-29   0.00014   61-166   1t0g A:  
cassava4.1_016811m|PACid:17982523   5.54e-27   0.00013   72-172   1t0g A:  

Populus trichocarpa v156 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
POPTR_0006s28200.1|PACid:18211547   1.7e-29   0.000019   3-99   1t0g A:  
POPTR_0018s02770.1|PACid:18215297   3.27e-31   0.0000147   2-99   1t0g A:  
 
Weak hits:
POPTR_0012s13510.1|PACid:18229533   1.09e-28   0.00016   62-167   1t0g A:  
POPTR_0015s13500.1|PACid:18232950   1.43e-28   0.00014   62-167   1t0g A:  
POPTR_0015s14990.1|PACid:18232699   1.59e-27   0.00018   76-179   1t0g A:  
POPTR_0016s02300.1|PACid:18250045   4.19e-25   0.00048   43-143   1t0g A:  
POPTR_0016s02300.2|PACid:18250046   4.19e-25   0.00048   43-143   1t0g A:  

Vitis vinifera has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
GSVIVT01035991001   1.7e-30   0.0000125   2-99   1t0g A:  
 
Weak hits:
GSVIVT01012987001   1.83e-25   0.00055   41-144   1t0g A:  

Mimulus guttatus v140 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
mgv1a016919m|PACid:17688144   5.37e-31   0.0000248   2-99   1t0g A:  
 
Weak hits:
mgv1a012737m|PACid:17676387   4.91e-23   0.00045   30-134   1t0g A:  
mgv1a012966m|PACid:17687381   2.26e-26   0.00014   64-169   1t0g A:  
mgv1a015217m|PACid:17680058   9.55e-28   0.00017   36-135   1t0g A:  

Solanum lycopersicum v.2.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Solyc08g029160.1.1   3.79e-29   0.0000167   2-99   1t0g A:  
 
Weak hits:
Solyc03g025950.2.1   4.76e-28   0.00015   62-167   1t0g A:  
Solyc04g049790.2.1   1.1e-24   0.00016   58-156   1t0g A:  
Solyc06g035870.2.1   1.55e-27   0.00017   63-167   1t0g A:  
Solyc07g044830.2.1   1.44e-24   0.00071   35-136   1t0g A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   381 381
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 2
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 4 4
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 5 5
No Yes Cucumis sativus v122 Cucumber 2 2
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 2
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes NCBI 2017_08 genome   106 106
No Yes STRING v9.0.5 (STRING)   11 11
No Yes Uniprot 2018_03 genome   127 127
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   2 2

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