SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


NinB superfamily domain assignments
in
Clostridium perfringens ATCC 13124


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a NinB domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   22141 22141
No Yes Trichinella spiralis 22   1 1
No Yes Fibrella aestuarina   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Herminiimonas arsenicoxydans   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Taylorella asinigenitalis MCE3   2 2
No Yes Bordetella bronchiseptica RB50   2 2
No Yes Achromobacter xylosoxidans   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Haemophilus parasuis SH0165   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Frateuria aurantia DSM 6220   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Sodalis glossinidius str. 'morsitans'   5 5
No Yes Erwinia billingiae Eb661   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia fergusonii ATCC 35469   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. 638   2 2
No Yes Enterobacter asburiae LF7a   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Sinorhizobium meliloti SM11   2 2
No Yes Liberibacter crescens BT-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Haemophilus parasuis ZJ0906   4 4
No Yes Haemophilus influenzae F3047   3 3
No Yes Haemophilus influenzae F3031   2 2
No Yes Haemophilus influenzae 10810   2 2
No Yes Haemophilus influenzae PittGG   2 2
No Yes Haemophilus influenzae 86-028NP   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Cronobacter sakazakii CMCC 45402   2 2
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   2 2
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Klebsiella pneumoniae JM45   2 2
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2071   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   2 2
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   3 3
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   3 3
No Yes Escherichia coli IHE3034   2 2
No Yes Escherichia coli UMNK88   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   2 2
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli UMN026   2 2
No Yes Escherichia coli 55989   2 2
No Yes Escherichia coli S88   2 2
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   2 2
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   2 2
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   4 4
No Yes Escherichia coli O26:H11 str. 11368   5 5
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   3 3
No Yes Escherichia coli O127:H6 str. E2348/69   3 3
No Yes Escherichia coli O157:H7 str. TW14359   4 4
No Yes Escherichia coli O157:H7 str. EC4115   3 3
No Yes Escherichia coli O157:H7 str. Sakai   3 3
No Yes Escherichia coli O157:H7 str. EDL933   3 3
No Yes Escherichia coli BW2952   2 2
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   3 3
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   2 2
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   3 3
No Yes Combined (meta-genome)   4 4
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   7 7
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   5 5
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   23 23
No Yes Dump top (Dump top) (meta-genome)   15 15
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   9 9
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes NCBI 2017_08 genome   19606 19606
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   105 105
No Yes Uniprot 2018_03 genome   1842 1842
No Yes Global Ocean Sampling Expedition (GOS)   37 37
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes NCBI viral sequences (Viral)   55 55
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   1 1
No Yes The Salmonella enterica Pan-genome (meta-genome)   12 12
No Yes UniProt viral sequences (Viral)   40 40

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]