SUPERFAMILY 1.75 HMM library and genome assignments server

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Antivirulence factor superfamily domain assignments
in
Vanderwaltozyma polyspora DSM 70294

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   446 446
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 3
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes NCBI 2017_08 genome   287 287
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Uniprot 2018_03 genome   117 117
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]