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PetM subunit of the cytochrome b6f complex superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 44 significant domains in 44 proteins.

Showing genomes 1 to 25 of 76
  1 2 3 4   Next Last

Selaginella moellendorffii has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|438339|estExt_fgenesh2_pg.C_20723   0.0000000968   80-111   PetM subunit of the cytochrome b6f complex  
jgi|Selmo1|444444|estExt_fgenesh2_pg.C_440032   0.0000000968   80-111   PetM subunit of the cytochrome b6f complex  

Pinus taeda has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PITA_000027089-RA   0.0000000146   93-125   PetM subunit of the cytochrome b6f complex  

Picea abies has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
MA_10294942g0010   0.0000000162   93-125   PetM subunit of the cytochrome b6f complex  

Eucalyptus grandis v201 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Eucgr.G01518.1|PACid:23587079   0.00000000000262   86-118   PetM subunit of the cytochrome b6f complex  
 
Weak hits:
Eucgr.I01216.1|PACid:23595755   0.000837   86-106   PetM subunit of the cytochrome b6f complex  

Theobroma cacao B97-61/B2 v1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc02_g001990   0.0000000000186   86-118   PetM subunit of the cytochrome b6f complex  
Tc08_g001260   0.000000000314   503-535   PetM subunit of the cytochrome b6f complex  

Gossypium raimondii v221 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.002G214600.1|PACid:26792121   0.0000000000196   89-121   PetM subunit of the cytochrome b6f complex  
Gorai.005G264100.1|PACid:26805083   0.00000000000706   89-121   PetM subunit of the cytochrome b6f complex  
Gorai.010G015700.1|PACid:26758338   0.0000000000194   89-122   PetM subunit of the cytochrome b6f complex  

Citrus clementina v165 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
clementine0.9_025412m|PACid:19252661   0.000000000011   93-125   PetM subunit of the cytochrome b6f complex  
clementine0.9_025522m|PACid:19252662   0.0000000000107   90-122   PetM subunit of the cytochrome b6f complex  

Citrus sinensis v154 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
orange1.1g033208m|PACid:18096054   0.0000000000167   90-122   PetM subunit of the cytochrome b6f complex  

Thellungiella halophila v173 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Thhalv10001257m|PACid:20208983   0.0000000000139   141-173   PetM subunit of the cytochrome b6f complex  

Brassica rapa Chiifu-401 1.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Bra007750   0.00000000000706   88-120   PetM subunit of the cytochrome b6f complex  

Capsella rubella v183 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Carubv10024324m|PACid:20903317   0.0000000000105   88-120   PetM subunit of the cytochrome b6f complex  

Arabidopsis lyrata has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Araly1|901414|scaffold_400915.1   0.0000000000228   153-185   PetM subunit of the cytochrome b6f complex  

Arabidopsis thaliana 10 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
AT2G26500.1   0.0000000000105   88-120   PetM subunit of the cytochrome b6f complex  
AT2G26500.2   0.0000000000105   88-120   PetM subunit of the cytochrome b6f complex  
 
Weak hits:
AT2G26500.3   0.00241   67-88   PetM subunit of the cytochrome b6f complex  
AT2G46390.1   0.0523   11-33   PetM subunit of the cytochrome b6f complex  

Carica papaya has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
evm.TU.supercontig_64.16   0.00000000000837   87-119   PetM subunit of the cytochrome b6f complex  

Medicago truncatula has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr1g034260.1   0.00000000000157   92-124   PetM subunit of the cytochrome b6f complex  

Phaseolus vulgaris v186 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Phvulv091019715m|PACid:23536029   0.0000000000654   92-124   PetM subunit of the cytochrome b6f complex  
Phvulv091022669m|PACid:23558514   0.000000000259   87-119   PetM subunit of the cytochrome b6f complex  

Glycine max v109 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma03g17360.1|PACid:16251868   0.00000000811   72-103   PetM subunit of the cytochrome b6f complex  
Glyma04g03820.1|PACid:16254763   0.0000000000654   87-119   PetM subunit of the cytochrome b6f complex  
Glyma06g03920.1|PACid:16261627   0.0000000000654   85-117   PetM subunit of the cytochrome b6f complex  
Glyma07g21150.1|PACid:16267882   0.00000000000706   89-121   PetM subunit of the cytochrome b6f complex  
Glyma20g01120.1|PACid:16315120   0.00000000000732   92-124   PetM subunit of the cytochrome b6f complex  

Cucumis sativus v122 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Cucsa.220200.1|PACid:16969918   0.0000000000445   90-122   PetM subunit of the cytochrome b6f complex  

Fragaria vesca has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gene00437   0.00000000000188   89-121   PetM subunit of the cytochrome b6f complex  
gene31645   0.00000000000785   89-121   PetM subunit of the cytochrome b6f complex  
gene31956   0.00000000000188   89-121   PetM subunit of the cytochrome b6f complex  

Malus domestica v196 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000364491|PACid:22632887   0.0000000000115   130-162   PetM subunit of the cytochrome b6f complex  
MDP0000676293|PACid:22630561   0.0000000000188   186-218   PetM subunit of the cytochrome b6f complex  
MDP0000854250|PACid:22661381   0.0000000000068   90-122   PetM subunit of the cytochrome b6f complex  

Prunus persica v139 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ppa013368m|PACid:17668706   0.0000000000018   88-120   PetM subunit of the cytochrome b6f complex  

Linum usitatissimum v200 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Lus10011665|PACid:23149662   0.00000000000575   86-118   PetM subunit of the cytochrome b6f complex  

Manihot esculenta v147 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
cassava4.1_019210m|PACid:17964430   0.0000000000126   90-122   PetM subunit of the cytochrome b6f complex  
cassava4.1_019273m|PACid:17977711   0.0000000000115   89-121   PetM subunit of the cytochrome b6f complex  
cassava4.1_019278m|PACid:17977710   0.0000000000115   89-121   PetM subunit of the cytochrome b6f complex  

Populus trichocarpa v156 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
POPTR_0004s15440.1|PACid:18226695   0.00000000000523   87-119   PetM subunit of the cytochrome b6f complex  
POPTR_0009s11190.1|PACid:18227710   0.00000000000418   87-119   PetM subunit of the cytochrome b6f complex  
POPTR_0014s03630.1|PACid:18224099   0.000000000012   90-121   PetM subunit of the cytochrome b6f complex  

Vitis vinifera has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
GSVIVT01009587001   0.0000000000654   87-119   PetM subunit of the cytochrome b6f complex  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1169 1169
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 2
No Yes Gossypium raimondii v221   3 3
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 5 5
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 3 3
No Yes Malus domestica v196 Apple 3 3
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Manihot esculenta v147 Cassava 3 3
No Yes Populus trichocarpa v156 Black cottonwood 3 3
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 2
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 3 3
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 4_050719Q (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   371 371
No Yes STRING v9.0.5 (STRING)   29 29
No Yes Uniprot 2018_03 genome   475 475
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   15 15
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   30 30

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