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LacY-like proton/sugar symporter family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1pv7A   8.35e-48   0.000000000000542   6-401   1pv7 A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   38703 38703
No Yes Coriobacterium glomerans PW2   2 2
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 2
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Melissococcus plutonius DAT561   2 2
No Yes Weissella koreensis KACC 15510   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   2 2
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus buchneri NRRL B-30929   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus megaterium DSM 319   2 2
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Rahnella sp. Y9602   4 4
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   4 4
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Serratia sp. AS12   3 3
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   3 3
No Yes Serratia proteamaculans 568   2 2
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   3 3
No Yes Pectobacterium sp. SCC3193   3 3
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   4 4
No Yes Cronobacter sakazakii ES15   3 3
No Yes Enterobacteriaceae bacterium strain FGI 57   2 2
No Yes Shigella sonnei Ss046   1 1
No Yes Klebsiella oxytoca E718   4 4
No Yes Klebsiella variicola At-22   5 5
No Yes Klebsiella pneumoniae NTUH-K2044   4 4
No Yes Enterobacter aerogenes KCTC 2190   3 3
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   2 2
No Yes Enterobacter asburiae LF7a   2 2
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 2
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   3 3
No Yes Azotobacter vinelandii DJ   2 2
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Streptomyces albus J1074   1 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   1 1
No Yes Bifidobacterium thermophilum RBL67   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Bifidobacterium asteroides PRL2011   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 2
No Yes Leuconostoc gelidum JB7   2 2
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Proteus mirabilis BB2000   1 1
No Yes Rahnella aquatilis HX2   5 5
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   3 3
No Yes Serratia plymuthica S13   4 4
No Yes Serratia plymuthica 4Rx13   3 3
No Yes Serratia marcescens FGI94   3 3
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   2 2
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Cronobacter sakazakii CMCC 45402   3 3
No Yes Cronobacter sakazakii SP291   4 4
No Yes Cronobacter sakazakii ATCC BAA-894   2 2
No Yes Raoultella ornithinolytica B6   6 6
No Yes Shigella sonnei 53G   2 2
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   2 2
No Yes Klebsiella oxytoca KCTC 1686   5 5
No Yes Klebsiella pneumoniae JM45   5 5
No Yes Klebsiella pneumoniae CG43   5 5
No Yes Klebsiella pneumoniae KCTC 2242   5 5
No Yes Klebsiella pneumoniae 342   5 5
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   6 6
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   5 5
No Yes Enterobacter aerogenes EA1509E   3 3
No Yes Escherichia coli E24377A   3 3
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   2 2
No Yes Escherichia coli APEC O78   2 2
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2071   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   2 2
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   2 2
No Yes Escherichia coli 55989   2 2
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   2 2
No Yes Escherichia coli W   2 2
No Yes Escherichia coli W   2 2
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   2 2
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   2 2
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   2 2
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   2 2
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   2 2
No Yes Escherichia coli O55:H7 str. CB9615   2 2
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   3 3
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   3 3
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   3 3
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   3 3
No Yes Azotobacter vinelandii CA6   2 2
No Yes Azotobacter vinelandii CA   2 2
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   14 14
No Yes Combined (meta-genome)   11 11
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   12 12
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   9 9
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   11 11
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   25 25
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   34 34
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   4 4
No Yes NCBI 2017_08 genome   35074 35074
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   119 119
No Yes Uniprot 2018_03 genome   2751 2751
No Yes Global Ocean Sampling Expedition (GOS)   8 8
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   16 16
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   60 60
No Yes The Salmonella enterica Pan-genome (meta-genome)   2 2

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