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Mitochondrial carrier superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 45 significant domains in 42 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|109686|estExt_Genewise1.C_12_t10352   3.66e-67   21-339   Mitochondrial carrier  
jgi|Conpu1|112529|estExt_Genewise1.C_17_t10324   2.62e-65   21-329   Mitochondrial carrier  
jgi|Conpu1|115923|estExt_Genewise1Plus.C_1_t50349   1.44e-71   9-306   Mitochondrial carrier  
jgi|Conpu1|117595|estExt_Genewise1Plus.C_2_t20495   3.01e-55   27-325   Mitochondrial carrier  
jgi|Conpu1|118285|estExt_Genewise1Plus.C_2_t40288   1.7e-16   67-166,193-228,260-323   Mitochondrial carrier  
jgi|Conpu1|121282|estExt_Genewise1Plus.C_4_t20302   1.96e-41   204-339   Mitochondrial carrier  
  1.7e-35   24-161   Mitochondrial carrier  
jgi|Conpu1|122049|estExt_Genewise1Plus.C_4_t40170   1.96e-73   3-289   Mitochondrial carrier  
jgi|Conpu1|123937|estExt_Genewise1Plus.C_6_t10377   1.83e-54   15-293   Mitochondrial carrier  
jgi|Conpu1|125336|estExt_Genewise1Plus.C_7_t20148   1.31e-73   7-298   Mitochondrial carrier  
jgi|Conpu1|130198|estExt_Genewise1Plus.C_13_t20078   2.62e-72   6-279   Mitochondrial carrier  
jgi|Conpu1|132840|estExt_Genewise1Plus.C_190230   6.67e-40   14-286   Mitochondrial carrier  
jgi|Conpu1|137326|estExt_fgenesh1_pm.C_6_t10336   8.11e-79   8-104,132-323   Mitochondrial carrier  
jgi|Conpu1|143016|estExt_fgenesh1_pg.C_4_t10256   2.62e-20   14-251,283-314   Mitochondrial carrier  
jgi|Conpu1|144664|estExt_fgenesh1_pg.C_7_t10421   7.85e-66   4-277   Mitochondrial carrier  
jgi|Conpu1|149775|gm1.1766_g   0.00000000798   271-298,326-362   Mitochondrial carrier  
  0.000131   12-31,85-123   Mitochondrial carrier  
jgi|Conpu1|154328|gm1.6319_g   0.00000000000017   3-94   Mitochondrial carrier  
jgi|Conpu1|155946|gm1.7937_g   1.44e-79   18-290   Mitochondrial carrier  
jgi|Conpu1|161268|estExt_Genemark1.C_1_t20110   2.22e-29   4-28,96-327,355-376   Mitochondrial carrier  
jgi|Conpu1|162224|estExt_Genemark1.C_2_t10282   0.0000000235   224-300,336-371   Mitochondrial carrier  
  0.0000248   27-51,93-185   Mitochondrial carrier  
jgi|Conpu1|163175|estExt_Genemark1.C_3_t10322   3.92e-57   12-330   Mitochondrial carrier  
jgi|Conpu1|164781|estExt_Genemark1.C_5_t10455   1.06e-59   3-294   Mitochondrial carrier  
jgi|Conpu1|166445|estExt_Genemark1.C_8_t10269   0.000000000000549   3-94   Mitochondrial carrier  
jgi|Conpu1|166446|estExt_Genemark1.C_8_t10270   3.79e-27   52-205   Mitochondrial carrier  
jgi|Conpu1|168210|estExt_Genemark1.C_120224   6.28e-65   21-158,185-354   Mitochondrial carrier  
jgi|Conpu1|44728|e_gw1.1.2268.1   2.22e-71   10-297   Mitochondrial carrier  
jgi|Conpu1|46401|e_gw1.1.2614.1   3.66e-72   344-624   Mitochondrial carrier  
jgi|Conpu1|54658|e_gw1.5.221.1   3.53e-67   1-272   Mitochondrial carrier  
jgi|Conpu1|55201|e_gw1.5.656.1   3.01e-65   293-583   Mitochondrial carrier  
jgi|Conpu1|56479|e_gw1.6.556.1   2.62e-63   1-268   Mitochondrial carrier  
jgi|Conpu1|58322|e_gw1.8.553.1   0.0000000000000101   174-249,281-314   Mitochondrial carrier  
  0.000000183   4-196   Mitochondrial carrier  
jgi|Conpu1|71212|fgenesh1_pg.3_#_657   3.4e-60   25-175,225-349   Mitochondrial carrier  
jgi|Conpu1|78752|fgenesh1_kg.1_#_230_#_isotig08334   3.4e-65   4-280   Mitochondrial carrier  
jgi|Conpu1|82816|fgenesh1_kg.7_#_318_#_isotig07938   2.75e-19   23-256,286-317   Mitochondrial carrier  
jgi|Conpu1|85446|fgenesh1_kg.17_#_38_#_isotig07859   8.37e-65   2-225,273-319   Mitochondrial carrier  
jgi|Conpu1|88158|fgenesh1_pm.3_#_45   9.94e-71   2-279   Mitochondrial carrier  
jgi|Conpu1|91208|fgenesh1_pm.8_#_348   0.00000000000000116   90-164,197-230   Mitochondrial carrier  
jgi|Conpu1|91570|fgenesh1_pm.9_#_339   7.72e-49   23-300   Mitochondrial carrier  
jgi|Conpu1|92314|fgenesh1_pm.11_#_278   5.1e-33   125-380   Mitochondrial carrier  
jgi|Conpu1|93301|fgenesh1_pm.16_#_38   3.53e-57   32-292   Mitochondrial carrier  
jgi|Conpu1|93641|fgenesh1_pm.18_#_64   9.94e-74   7-283   Mitochondrial carrier  
jgi|Conpu1|95763|estExt_Genewise1.C_1_t50030   3.53e-38   12-292   Mitochondrial carrier  
jgi|Conpu1|95799|estExt_Genewise1.C_1_t50066   8.5e-77   870-1148   Mitochondrial carrier  
 
Weak hits:
jgi|Conpu1|73781|fgenesh1_pg.7_#_462   0.0017   241-278   Mitochondrial carrier  
  0.0183   393-417,450-469   Mitochondrial carrier  

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Select to display   Genome       Domains   Proteins
No Yes ALL   174478 174478
No Yes Homo sapiens 76_38 Human 222 220
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 53 53
No Yes Gorilla gorilla 76_3.1 Western gorilla 67 67
No Yes Pongo abelii 76_2 Sumatran orangutan 59 58
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 54 54
No Yes Papio anubis 76 Olive baboon 63 62
No Yes Macaca mulatta 76_1 Rhesus monkey 95 93
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 110 109
No Yes Otolemur garnettii 76_3 Small-eared galago 59 59
No Yes Microcebus murinus 76_1 Gray mouse lemur 63 53
No Yes Rattus norvegicus 76_5.0 Norway rat 68 67
No Yes Mus musculus 76_38 House mouse 129 129
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 58 49
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 57 57
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 66 65
No Yes Cavia porcellus 76_3 Domestic guinea pig 51 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 56 55
No Yes Ochotona princeps 76 American pika 50 45
No Yes Tupaia belangeri 76 Northern tree shrew 52 43
No Yes Sus scrofa 76_10.2 Pig 66 66
No Yes Bos taurus 76_3.1 Cattle 62 62
No Yes Ovis aries 76_3.1 Sheep 62 61
No Yes Vicugna pacos 76_1 Alpaca 43 37
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 52 49
No Yes Mustela putorius furo 76_1.0 Domestic ferret 51 51
No Yes Ailuropoda melanoleuca 76_1 Giant panda 58 58
No Yes Canis familiaris 76_3.1 Dog 69 69
No Yes Felis catus 76_6.2 Domestic cat 61 60
No Yes Equus caballus 76_2 Horse 53 53
No Yes Myotis lucifugus 76_2.0 Little brown bat 56 56
No Yes Pteropus vampyrus 76_1 Large flying fox 52 50
No Yes Sorex araneus 76_1 European shrew 42 39
No Yes Erinaceus europaeus 76 Western European hedgehog 57 45
No Yes Procavia capensis 76_1 Cape rock hyrax 54 46
No Yes Loxodonta africana 76_3 African savanna elephant 73 72
No Yes Echinops telfairi 76 Small Madagascar hedgehog 63 57
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 81 76
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 33 29
No Yes Macropus eugenii 76_1.0 Tammar wallaby 53 50
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 58 58
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 61 61
No Yes Ornithorhynchus anatinus 76_5 Platypus 51 51
No Yes Saccoglossus kowalevskii v3.0   77 75
No Yes Petromyzon marinus 76_7.0 Sea lamprey 28 27
No Yes Meleagris gallopavo 76_2 Turkey 42 42
No Yes Gallus gallus 76_4 Chicken 40 40
No Yes Anas platyrhynchos 76_1.0 Mallard 38 38
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 52 52
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 45 44
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 54 54
No Yes Anolis carolinensis 76_2.0 Green anole 51 51
No Yes Xenopus laevis African clawed frog 110 110
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 57 57
No Yes Latimeria chalumnae 76_1 Coelacanth 66 66
No Yes Lepisosteus oculatus 76 Spotted gar 59 59
No Yes Gadus morhua 76_1 Atlantic cod 68 67
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 67 66
No Yes Takifugu rubripes 76_4 Torafugu 136 136
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 87 87
No Yes Oryzias latipes 76_1 Japanese medaka 96 95
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 65 65
No Yes Poecilia formosa 76 Amazon molly 72 71
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 78 78
No Yes Astyanax mexicanus 76 Mexican tetra 66 66
No Yes Danio rerio 76_9 Zebrafish 98 98
No Yes Oikopleura dioica   39 39
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 45 45
No Yes Ciona intestinalis 76 Vase tunicate 31 31
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 55 54
No Yes Adineta vaga   123 122
No Yes Octopus bimaculoides 280   47 47
No Yes Crassostrea gigas 22 Pacific oyster 39 38
No Yes Lottia gigantea Owl limpet 37 36
No Yes Helobdella robusta   34 33
No Yes Capitella sp. I   44 44
No Yes Danaus plexippus OGS1.0 Monarch butterfly 41 41
No Yes Heliconius melpomene Postman butterfly 36 35
No Yes Bombyx mori Domestic silkworm 38 38
No Yes Nasonia vitripennis Jewel wasp 32 32
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 122 122
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 34 33
No Yes Linepithema humile v1.1 Argentine ant 33 33
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 37 37
No Yes Solenopsis invicta v.2.2.3 Red fire ant 29 29
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 33 33
No Yes Atta cephalotes v1.1   41 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 37 37
No Yes Lucilia cuprina Australian sheep blowfly 37 33
No Yes Drosophila grimshawi 1.3   47 46
No Yes Drosophila willistoni 1.3   45 45
No Yes Drosophila pseudoobscura 2.13   51 50
No Yes Drosophila persimilis 1.3   62 61
No Yes Drosophila suzukii   67 51
No Yes Drosophila yakuba 1.3   53 52
No Yes Drosophila simulans 1.3   48 47
No Yes Drosophila sechellia 1.3   53 52
No Yes Drosophila melanogaster 76_5 Fruit fly 101 101
No Yes Drosophila erecta 1.3   50 49
No Yes Drosophila ananassae 1.3   54 53
No Yes Drosophila virilis 1.2   47 46
No Yes Drosophila mojavensis 1.3   44 43
No Yes Megaselia scalaris 22   20 20
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 46 46
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 49
No Yes Anopheles darlingi 22 American malaria mosquito 30 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 36 36
No Yes Tribolium castaneum 3.0 Red flour beetle 38 38
No Yes Pediculus humanus corporis (Early assembly) Human body louse 41 40
No Yes Acyrthosiphon pisum Pea aphid 35 34
No Yes Rhodnius prolixus 22   37 37
No Yes Daphnia pulex Common water flea 35 35
No Yes Strigamia maritima 22   37 36
No Yes Sarcoptes scabiei   32 32
No Yes Tetranychus urticae Two-spotted spider mite 40 40
No Yes Ixodes scapularis (Preliminary) Black-legged tick 36 36
No Yes Pristionchus pacificus   37 36
No Yes Meloidogyne incognita Southern root-knot nematode 43 40
No Yes Meloidogyne hapla   27 26
No Yes Onchocerca volvulus 22   25 25
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 34 34
No Yes Caenorhabditis japonica   37 37
No Yes Caenorhabditis brenneri   53 53
No Yes Caenorhabditis remanei   45 44
No Yes Caenorhabditis elegans 76_235 Roundworm 108 108
No Yes Caenorhabditis briggsae 2   38 37
No Yes Trichinella spiralis 22   24 24
No Yes Hymenolepis microstoma   28 26
No Yes Echinococcus multilocularis   28 27
No Yes Echinococcus granulosus   26 26
No Yes Taenia solium Pork tapeworm 28 27
No Yes Schistosoma mansoni   30 30
No Yes Mnemiopsis leidyi Sea walnut 36 36
No Yes Thelohanellus kitauei   12 12
No Yes Acropora digitifera v1.0   38 38
No Yes Nematostella vectensis 1.0 Starlet sea anemone 56 56
No Yes Hydra vulgaris   37 37
No Yes Amphimedon queenslandica   43 43
No Yes Trichoplax adhaerens   34 33
No Yes Proterospongia sp. ATCC 50818   40 39
No Yes Monosiga brevicollis   38 38
No Yes Sphaeroforma arctica JP610   57 55
No Yes Capsaspora owczarzaki ATCC 30864   43 41
No Yes Conidiobolus coronatus NRRL28638 v1.0   35 35
No Yes Mortierella verticillata NRRL 6337   65 64
No Yes Phycomyces blakesleeanus   54 53
No Yes Rhizopus oryzae RA 99-880   65 65
No Yes Mucor circinelloides   61 61
No Yes Rhizomucor miehei CAU432   49 48
No Yes Malassezia globosa CBS 7966   68 66
No Yes Sporisorium reilianum 22   38 38
No Yes Ustilago maydis   41 39
No Yes Mixia osmundae IAM 14324 v1.0   35 35
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   33 33
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   36 36
No Yes Melampsora laricis-populina   35 35
No Yes Rhodotorula graminis WP1 v1.0   36 36
No Yes Sporobolomyces roseus IAM 13481   37 37
No Yes Microbotryum violaceum 22   42 41
No Yes Wallemia sebi v1.0   32 31
No Yes Sphaerobolus stellatus v1.0   46 45
No Yes Piloderma croceum F 1598 v1.0   44 43
No Yes Serpula lacrymans var. lacrymans S7.9   39 38
No Yes Coniophora puteana   45 42
No Yes Hydnomerulius pinastri v2.0   41 40
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   37 36
No Yes Pisolithus microcarpus 441 v1.0   38 38
No Yes Pisolithus tinctorius Marx 270 v1.0   38 37
No Yes Scleroderma citrinum Foug A v1.0   40 39
No Yes Coprinopsis cinerea okayama7 130 v3   39 38
No Yes Pleurotus ostreatus Oyster mushroom 37 36
No Yes Amanita thiersii Skay4041 v1.0   40 38
No Yes Amanita muscaria Koide v1.0 Fly agaric 39 38
No Yes Galerina marginata v1.0   44 43
No Yes Hebeloma cylindrosporum h7 v2.0   42 40
No Yes Laccaria bicolor S238N-H82   42 42
No Yes Agaricus bisporus var. bisporus   36 35
No Yes Schizophyllum commune   36 36
No Yes Stereum hirsutum FP-91666 SS1 v1.0   38 38
No Yes Heterobasidion annosum   37 37
No Yes Gloeophyllum trabeumv1.0   40 39
No Yes Punctularia strigosozonata v1.0   40 39
No Yes Sebacina vermifera MAFF 305830 v1.0   41 41
No Yes Fomitiporia mediterranea v1.0   36 36
No Yes Tulasnella calospora AL13/4D v1.0   42 41
No Yes Postia placenta   65 63
No Yes Wolfiporia cocos MD-104 SS10 v1.0   42 41
No Yes Fomitopsis pinicolav1.0   40 39
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   40 39
No Yes Phanerochaete chrysosporium RP-78 2.1   36 36
No Yes Dichomitus squalens   40 38
No Yes Trametes versicolor v1.0   38 37
No Yes Tremella mesenterica Witches' butter 35 35
No Yes Daldinia eschscholzii EC12 v1.0   39 38
No Yes Apiospora montagnei NRRL 25634 v1.0   40 40
No Yes Magnaporthe poae ATCC 64411 22   34 33
No Yes Magnaporthe grisea 70-15   39 39
No Yes Podospora anserina   37 37
No Yes Sporotrichum thermophile ATCC 42464   34 34
No Yes Thielavia terrestris NRRL 8126   34 34
No Yes Chaetomium globosum CBS 148.51   36 36
No Yes Neurospora tetrasperma   36 36
No Yes Neurospora discreta FGSC 8579   38 38
No Yes Neurospora crassa OR74A   38 38
No Yes Cryphonectria parasitica Chestnut blight fungus 38 38
No Yes Verticillium albo-atrum VaMs.102   36 36
No Yes Verticillium dahliae VdLs.17   39 39
No Yes Acremonium alcalophilumv 1.0   35 35
No Yes Glomerella graminicola 22   42 42
No Yes Fusarium graminearum   42 42
No Yes Nectria haematococca mpVI   50 50
No Yes Fusarium oxysporum f. sp. lycopersici 4286   44 44
No Yes Fusarium verticillioides 7600   42 42
No Yes Trichoderma asperellum CBS 433.97 v1.0   39 39
No Yes Trichoderma atroviride   38 38
No Yes Trichoderma citrinoviride v1.0   36 36
No Yes Trichoderma reesei 1.2   37 37
No Yes Trichoderma virens Gv29-8   39 39
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   36 36
No Yes Trichoderma harzianum CBS 226.95 v1.0   41 41
No Yes Amorphotheca resinae v1.0 Creosote fungus 38 38
No Yes Botrytis cinerea B05.10   36 36
No Yes Sclerotinia sclerotiorum   37 37
No Yes Blumeria graminis 22   33 33
No Yes Didymella exigua CBS 183.55 v1.0   40 40
No Yes Leptosphaeria maculans 22   42 40
No Yes Setosphaeria turcica v1.0   40 40
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   42 42
No Yes Cochliobolus victoriae FI3 v1.0   44 44
No Yes Cochliobolus carbonum 26-R-13 v1.0   45 45
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 40 40
No Yes Alternaria brassicicola   39 38
No Yes Cochliobolus lunatus m118 v2.0   40 40
No Yes Pyrenophora teres f. teres 22   41 41
No Yes Pyrenophora tritici-repentis   41 41
No Yes Stagonospora nodorum   44 44
No Yes Mycosphaerella graminicola IPO323   41 41
No Yes Zasmidium cellare ATCC 36951 v1.0   44 44
No Yes Dothistroma septosporum   39 39
No Yes Septoria musiva v1.0   40 39
No Yes Mycosphaerella fijiensis CIRAD86   36 36
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   42 42
No Yes Paracoccidioides brasiliensis Pb18   36 36
No Yes Coccidioides posadasii RMSCC 3488   36 35
No Yes Coccidioides immitis RS   36 36
No Yes Ajellomyces dermatitidis SLH14081   35 35
No Yes Histoplasma capsulatum class NAmI strain WU24   34 34
No Yes Microsporum canis CBS 113480   37 37
No Yes Trichophyton equinum CBS 127.97   34 34
No Yes Trichophyton verrucosum HKI 0517   31 31
No Yes Arthroderma benhamiae CBS 112371   30 30
No Yes Trichophyton tonsurans CBS 112818   36 36
No Yes Trichophyton rubrum CBS 118892   35 35
No Yes Uncinocarpus reesii 1704   37 36
No Yes Aspergillus zonatus v1.0   38 38
No Yes Penicillium chrysogenum Wisconsin 54-1255   41 41
No Yes Penicillium chrysogenum v1.0   43 43
No Yes Aspergillus acidus v1.0   42 42
No Yes Aspergillus fumigatus Af293   41 40
No Yes Aspergillus brasiliensis v1.0   40 40
No Yes Aspergillus nidulans FGSC A4   39 39
No Yes Aspergillus sydowii v1.0   46 46
No Yes Aspergillus versicolor v1.0   47 47
No Yes Aspergillus glaucus   42 41
No Yes Aspergillus carbonarius ITEM 5010   41 41
No Yes Neosartorya fischeri NRRL 181   40 39
No Yes Aspergillus terreus NIH2624   43 43
No Yes Aspergillus tubingensis v1.0   40 40
No Yes Aspergillus wentii v1.0   45 45
No Yes Aspergillus oryzae RIB40   44 44
No Yes Aspergillus niger 22   39 39
No Yes Aspergillus niger ATCC 1015   25 25
No Yes Aspergillus flavus NRRL3357   44 44
No Yes Aspergillus clavatus NRRL 1   39 38
No Yes Penicillium marneffei ATCC 18224   44 44
No Yes Tuber melanosporum Mel28 22   35 35
No Yes Tuber melanosporum Vittad Perigord truffle 36 36
No Yes Hansenula polymorpha v2.0   32 32
No Yes Dekkera bruxellensis CBS 2499 v2.0   32 32
No Yes Pichia membranifaciensv1.0   31 31
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   34 34
No Yes Candida dubliniensis CD36   34 34
No Yes Candida tropicalis MYA-3404   34 34
No Yes Candida parapsilosis   33 33
No Yes Candida albicans SC5314   34 34
No Yes Lodderomyces elongisporus NRRL YB-4239   35 34
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   35 35
No Yes Pichia stipitis CBS 6054   35 35
No Yes Candida guilliermondii ATCC 6260   33 33
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   34 34
No Yes Debaromyces hansenii   36 36
No Yes Wickerhamomyces anomalus   36 36
No Yes Pichia pastoris GS115   35 35
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   27 26
No Yes Yarrowia lipolytica CLIB122   39 39
No Yes Candida lusitaniae ATCC 42720   32 32
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   34 34
No Yes Vanderwaltozyma polyspora DSM 70294   35 35
No Yes Candida glabrata CBS138   31 31
No Yes Kluyveromyces thermotolerans CBS 6340   33 33
No Yes Lachancea kluyveri   34 34
No Yes Kluyveromyces waltii   33 33
No Yes Ashbya gossypii ATCC 10895   28 28
No Yes Zygosaccharomyces rouxii   34 34
No Yes Saccharomyces mikatae MIT   35 35
No Yes Saccharomyces paradoxus MIT   35 35
No Yes Saccharomyces cerevisiae 76 Baker's yeast 35 35
No Yes Saccharomyces bayanus MIT   37 37
No Yes Kluyveromyces lactis   30 30
No Yes Schizosaccharomyces cryophilus OY26 22   25 25
No Yes Schizosaccharomyces octosporus yFS286   24 24
No Yes Schizosaccharomyces japonicus yFS275   26 26
No Yes Schizosaccharomyces pombe Fission yeast 25 24
No Yes Catenaria anguillulae PL171 v1.0   41 41
No Yes Allomyces macrogynus ATCC 38327   80 77
No Yes Spizellomyces punctatus DAOM BR117   50 49
No Yes Dictyostelium discoideum   37 37
No Yes Dictyostelium purpureum   36 36
No Yes Entamoeba dispar 1.2   2 2
No Yes Entamoeba invadens 1.2   2 2
No Yes Entamoeba histolytica 1   3 3
No Yes Selaginella moellendorffii   108 107
No Yes Pinus taeda Loblolly pine 92 87
No Yes Picea abies Norway spruce 51 48
No Yes Eucalyptus grandis v201 Rose gum 106 105
No Yes Theobroma cacao B97-61/B2 v1 Cacao 66 65
No Yes Gossypium raimondii v221   241 240
No Yes Citrus clementina v165   98 98
No Yes Citrus sinensis v154 Sweet orange 123 123
No Yes Thellungiella halophila v173   66 66
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 98 97
No Yes Capsella rubella v183   71 71
No Yes Arabidopsis lyrata Lyrate rockcress 68 68
No Yes Arabidopsis thaliana 10 Thale cress 69 69
No Yes Carica papaya Papaya 59 59
No Yes Medicago truncatula Barrel medic 127 126
No Yes Phaseolus vulgaris v186 French bean 88 88
No Yes Glycine max v109 Soybean 171 170
No Yes Cucumis sativus v122 Cucumber 98 98
No Yes Fragaria vesca Wild strawberry 65 63
No Yes Malus domestica v196 Apple 174 165
No Yes Prunus persica v139 Peach 61 61
No Yes Linum usitatissimum v200 Flax 118 115
No Yes Manihot esculenta v147 Cassava 92 92
No Yes Populus trichocarpa v156 Black cottonwood 104 104
No Yes Vitis vinifera Wine grape 61 61
No Yes Mimulus guttatus v140 Spotted monkey flower 73 73
No Yes Solanum lycopersicum v.2.3 Tomato 65 65
No Yes Solanum tuberosum Potato 124 118
No Yes Actinidia chinensis Hongyang   116 113
No Yes Aquilegia coerulea v195   106 105
No Yes Triticum urartu 22   55 54
No Yes Triticum aestivum 22 Bread wheat 185 182
No Yes Aegilops tauschii 22   54 53
No Yes Brachypodium distachyon Stiff brome 70 69
No Yes Oryza barthii 22 African wild rice 74 73
No Yes Oryza meridionalis 22   79 79
No Yes Oryza glumaepatula 22   94 94
No Yes Oryza glaberrima African rice 51 51
No Yes Oryza punctata 22   86 86
No Yes Oryza nivara 22   79 78
No Yes Oryza brachyantha 22 Malo sina 63 63
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 94 94
No Yes Oryza sativa v193 Rice 92 92
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 97 91
No Yes Panicum virgatum v202 Switchgrass 142 142
No Yes Setaria italica v164 Foxtail millet 78 78
No Yes Zea mays subsp. mays Maize 151 151
No Yes Zea mays v181 Maize 162 162
No Yes Sorghum bicolor Sorghum 70 68
No Yes Musa balbisiana Balbis banana 111 107
No Yes Musa acuminata 22 Wild Malaysian banana 115 115
No Yes Amborella trichopoda 22   52 52
No Yes Physcomitrella patens   95 95
No Yes Coccomyxa subellipsoidea sp. C-169 v2   41 41
No Yes Asterochloris sp. Cgr/DA1pho v1.0   33 32
No Yes Chlorella variabilis sp. NC64A   34 33
No Yes Chlorella vulgaris   42 41
No Yes Volvox carteri f. nagariensis   41 40
No Yes Volvox carteri v199   44 43
No Yes Chlamydomonas reinhardtii 4.0   47 44
No Yes Ostreococcus sp. RCC809   40 39
No Yes Ostreococcus lucimarinus CCE9901   43 43
No Yes Ostreococcus tauri   40 39
No Yes Bathycoccus prasinos   38 37
No Yes Micromonas sp. RCC299   45 45
No Yes Micromonas pusilla CCMP1545 v3.0   45 43
No Yes Cyanidioschyzon merolae strain 10D 22   31 31
No Yes Cyanidioschyzon merolae   31 31
No Yes Porphyridium purpureum 02_2012   41 41
No Yes Thecamonas trahens ATCC 50062   48 48
No Yes Bigelowiella natans CCMP2755 22   82 79
No Yes Cyanophora paradoxa   58 57
No Yes Leishmania mexicana 2.4   35 34
No Yes Leishmania major strain Friedlin   42 41
No Yes Leishmania infantum JPCM5 2.4   37 36
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   35 34
No Yes Trypanosoma vivax   32 31
No Yes Trypanosoma cruzi strain CL Brener   31 29
No Yes Trypanosoma congolense 2.4   37 36
No Yes Trypanosoma brucei gambiense v4.1   29 28
No Yes Trypanosoma brucei TREU927 v4.1   31 30
No Yes Ectocarpus siliculosus   63 60
No Yes Aureococcus anophagefferens   62 62
No Yes Albugo laibachii 22   40 40
No Yes Pythium iwayamai DAOM BR242034 22   47 47
No Yes Pythium arrhenomanes ATCC 12531 22   48 45
No Yes Pythium ultimum v1.7-2   47 47
No Yes Pythium aphanidermatum DAOM BR444 22   46 46
No Yes Pythium irregulare DAOM BR486 22   44 43
No Yes Pythium vexans DAOM BR484 22   43 43
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 48 48
No Yes Phytophthora sojae 1.1   46 46
No Yes Phytophthora infestans T30-4   50 50
No Yes Phytophthora capsici   52 52
No Yes Hyaloperonospora arabidopsidis 22   44 43
No Yes Phaeodactylum tricornutumCCAP 1055/1   63 63
No Yes Fragilariopsis cylindrus   97 97
No Yes Thalassiosira pseudonana CCMP1335   59 58
No Yes Perkinsus marinus ATCC 50983   62 62
No Yes Paramecium tetraurelia   102 101
No Yes Tetrahymena thermophila SB210 1   56 54
No Yes Ichthyophthirius multifiliis strain G5   43 42
No Yes Cryptosporidium hominis   8 8
No Yes Cryptosporidium muris   14 13
No Yes Cryptosporidium parvum Iowa II   9 9
No Yes Neospora caninum   23 20
No Yes Toxoplasma gondii VEG   25 22
No Yes Toxoplasma gondii ME49   25 22
No Yes Toxoplasma gondii GT1   26 23
No Yes Babesia bovis T2Bo   18 18
No Yes Theileria parva   10 10
No Yes Theileria annulata   10 10
No Yes Plasmodium falciparum 3D7   15 13
No Yes Plasmodium vivax SaI-1 7.0   17 15
No Yes Plasmodium knowlesi strain H   15 13
No Yes Plasmodium yoelii ssp. yoelii 1   12 11
No Yes Plasmodium chabaudi   15 13
No Yes Plasmodium berghei ANKA   14 13
No Yes Symbiodinium minutum clade B1 v1.2   108 103
No Yes Naegleria gruberi   55 55
No Yes Trichomonas vaginalis   6 6
No Yes Guillardia theta CCMP2712 v1.0   92 91
No Yes Emiliania huxleyi CCMP1516   179 175
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Candidatus Cardinium hertigii   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Babela massiliensis   1 1
No Yes Neorickettsia sennetsu str. Miyayama   2 2
No Yes Neorickettsia risticii str. Illinois   2 2
No Yes Legionella longbeachae NSW150   3 3
No Yes Legionella pneumophila str. Corby   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 126 126
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 86 86
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 43 43
No Yes Ascaris suum Victoria/Ghent Pig roundworm 39 38
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 45 45
No Yes Cryptococcus neoformans var. grubii H99   38 37
No Yes Cryptococcus neoformans B-3501A   38 37
No Yes Cryptococcus neoformans JEC21   32 31
No Yes Paracoccidioides brasiliensis Pb01   35 35
No Yes Paracoccidioides brasiliensis Pb03   36 36
No Yes Coccidioides posadasii str. Silveira   37 37
No Yes Coccidioides immitis RMSCC 3703   34 34
No Yes Coccidioides immitis RMSCC 2394   34 34
No Yes Coccidioides immitis H538.4   36 36
No Yes Ajellomyces dermatitidis ER-3   35 35
No Yes Histoplasma capsulatum H143   36 36
No Yes Histoplasma capsulatum H88   35 35
No Yes Histoplasma capsulatum G186AR   35 35
No Yes Aspergillus fumigatus A1163   39 38
No Yes Candida albicans WO-1   34 34
No Yes Saccharomyces cerevisiae UC5   32 32
No Yes Saccharomyces cerevisiae PW5   29 29
No Yes Saccharomyces cerevisiae FL100   23 23
No Yes Saccharomyces cerevisiae CLIB382   4 4
No Yes Saccharomyces cerevisiae CLIB324   22 22
No Yes Saccharomyces cerevisiae CBS7960   28 28
No Yes Saccharomyces cerevisiae YJM269   30 30
No Yes Saccharomyces cerevisiae T7   35 35
No Yes Saccharomyces cerevisiae FostersB   35 35
No Yes Saccharomyces cerevisiae FostersO   33 33
No Yes Saccharomyces cerevisiae VL3   35 35
No Yes Saccharomyces cerevisiae Vin13   34 34
No Yes Saccharomyces cerevisiae LalvinQA23   35 35
No Yes Saccharomyces cerevisiae AWRI796   34 34
No Yes Saccharomyces cerevisiae Sigma1278b   35 35
No Yes Saccharomyces cerevisiae W303   35 35
No Yes Saccharomyces cerevisiae JAY291   35 35
No Yes Saccharomyces cerevisiae AWRI1631   26 26
No Yes Saccharomyces cerevisiae YPS163   21 21
No Yes Saccharomyces cerevisiae M22   12 12
No Yes Saccharomyces cerevisiae T73   18 18
No Yes Saccharomyces cerevisiae CLIB215   31 31
No Yes Saccharomyces cerevisiae Y10   19 19
No Yes Saccharomyces cerevisiae YJM789   35 35
No Yes Saccharomyces cerevisiae YJM789   35 35
No Yes Saccharomyces cerevisiae RM11-1a   35 35
No Yes Saccharomyces cerevisiae RM11-1a   35 35
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 35 35
No Yes Schizosaccharomyces pombe 972h-   25 24
No Yes Batrachochytrium dendrobatidis JEL423   36 36
No Yes Batrachochytrium dendrobatidis JAM81   35 35
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 67 63
No Yes Hordeum vulgare 22 Domesticated barley 137 136
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 69 65
No Yes Trypanosoma brucei Lister 427 v4.1   31 30
No Yes Neospora caninum Nc-Liverpool 6.2   23 20
No Yes Plasmodium falciparum HB3   13 12
No Yes Plasmodium falciparum Dd2   9 9
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 247 246
No Yes Homo sapiens (NCBI version) Human 75 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 52 52
No Yes Heliconius numata (Incomplete)   23 23
No Yes Loa loa v3.3 (Request) Eye worm 29 28
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 20 18
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 24 23
No Yes Moniliophthora perniciosa FA553 (Genome survey)   44 44
No Yes Picea sitchensis (Incomplete) Sitka spruce 10 10
No Yes Lotus japonicus (Early assembly)   92 92
No Yes Malus x domestica (Duplicate) Apple 174 165
No Yes Ricinus communis (Early assembly) Castor bean 66 66
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   162 151
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 65 65
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 65 65
No Yes Phoenix dactylifera (Early draft) Date palm 58 55
No Yes Homo sapiens 69_37 Human 57 56
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 51 51
No Yes Gorilla gorilla 69_3.1 Western gorilla 56 56
No Yes Pongo abelii 69_2 Sumatran orangutan 52 51
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 51 50
No Yes Macaca mulatta 69_1 Rhesus monkey 61 60
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 63 62
No Yes Otolemur garnettii 69_3 Small-eared galago 55 55
No Yes Microcebus murinus 69_1 Gray mouse lemur 63 53
No Yes Rattus norvegicus 69_3.4 Norway rat 63 62
No Yes Mus musculus 69_38 House mouse 52 52
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 58 49
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 54 54
No Yes Cavia porcellus 69_3 Domestic guinea pig 51 51
No Yes Oryctolagus cuniculus 69_2 Rabbit 50 50
No Yes Ochotona princeps 69 American pika 50 45
No Yes Tupaia belangeri 69 Northern tree shrew 52 43
No Yes Sus scrofa 69_10.2 Pig 49 49
No Yes Bos taurus 69_3.1 Cattle 54 54
No Yes Vicugna pacos 69_1 Alpaca 43 37
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 52 49
No Yes Mustela putorius furo 69_1.0 Domestic ferret 51 51
No Yes Ailuropoda melanoleuca 69_1 Giant panda 52 52
No Yes Canis familiaris 69_3.1 Dog 57 57
No Yes Felis catus 69 Domestic cat 49 44
No Yes Equus caballus 69_2 Horse 51 51
No Yes Myotis lucifugus 69_2.0 Little brown bat 55 55
No Yes Pteropus vampyrus 69_1 Large flying fox 52 50
No Yes Sorex araneus 69_1 European shrew 42 39
No Yes Erinaceus europaeus 69 Western European hedgehog 57 45
No Yes Procavia capensis 69_1 Cape rock hyrax 54 46
No Yes Loxodonta africana 69_3 African savanna elephant 55 54
No Yes Echinops telfairi 69 Small Madagascar hedgehog 63 57
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 42 36
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 33 29
No Yes Macropus eugenii 69_1.0 Tammar wallaby 53 50
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 51 51
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 61 61
No Yes Ornithorhynchus anatinus 69_5 Platypus 46 46
No Yes Petromyzon marinus 69_7.0 Sea lamprey 28 27
No Yes Meleagris gallopavo 69_2 Turkey 41 41
No Yes Gallus gallus 69_2 Chicken 39 39
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 51 51
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 50 50
No Yes Anolis carolinensis 69_2.0 Green anole 48 48
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 48 48
No Yes Latimeria chalumnae 69_1 Coelacanth 56 56
No Yes Gadus morhua 69_1 Atlantic cod 66 65
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 61 60
No Yes Takifugu rubripes 69_4 Torafugu 65 65
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 61 61
No Yes Oryzias latipes 69_1 Japanese medaka 63 62
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 65 65
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 67 67
No Yes Danio rerio 69_9 Zebrafish 68 68
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 30 30
No Yes Ciona intestinalis 69 Vase tunicate 29 29
No Yes Drosophila melanogaster 69_5 Fruit fly 49 49
No Yes Caenorhabditis elegans 69_215 Roundworm 38 38
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 35 35
No Yes Arabidopsis thaliana 10 Thale cress 59 59
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   7 7
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   8 8
No Yes Core Eukaryotic Genes 458 (CEGMA)   18 18
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   5 5
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   52101 51781
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Protozoadb 2010_08 (Protozoadb)   533 504
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   25 25
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   5 5
No Yes STRING v9.0.5 (STRING)   5154 5091
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   69169 68138
No Yes Global Ocean Sampling Expedition (GOS)   533 530
No Yes NCBI viral sequences (Viral)   8 8
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   20 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   23 23
No Yes TargetDB (Targets)   222 221
No Yes UniProt viral sequences (Viral)   3 3

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