SUPERFAMILY 1.75 HMM library and genome assignments server

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Sporulation related repeat superfamily domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
1utaA   1.02e-22   9-75   Sporulation related repeat  

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View all assignments containing a Sporulation related repeat domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   214348 214348
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Caenorhabditis japonica   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Phytophthora capsici   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Truepera radiovictrix DSM 17093   4 3
No Yes Deinococcus gobiensis I-0   2 1
No Yes Deinococcus deserti VCD115   2 1
No Yes Deinococcus maricopensis DSM 21211   2 1
No Yes Deinococcus geothermalis DSM 11300   2 1
No Yes Deinococcus proteolyticus MRP   2 1
No Yes Deinococcus radiodurans R1   2 1
No Yes Oceanithermus profundus DSM 14977   2 1
No Yes Marinithermus hydrothermalis DSM 14884   2 1
No Yes Meiothermus silvanus DSM 9946   2 1
No Yes Meiothermus ruber DSM 1279   2 1
No Yes Thermus sp. CCB_US3_UF1   2 1
No Yes Thermus scotoductus SA-01   2 1
No Yes Thermus thermophilus HB27   2 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridium cellulolyticum H10   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus sp.   1 1
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Clostridium novyi NT   1 1
No Yes Clostridium kluyveri DSM 555   2 2
No Yes Clostridium tetani E88   2 2
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   5 5
No Yes Mahella australiensis 50-1 BON   3 3
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 2
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   2 2
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   2 2
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halothermothrix orenii H 168   2 2
No Yes Halanaerobium hydrogeniformans   2 2
No Yes Halanaerobium praevalens DSM 2228   2 2
No Yes Kyrpidia tusciae DSM 2912   2 2
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus selenitireducens MLS10   3 3
No Yes Geobacillus thermoglucosidasius C56-YS93   2 2
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. JS   2 2
No Yes Bacillus sp. 1NLA3E   2 2
No Yes Bacillus amyloliquefaciens FZB42   2 2
No Yes Bacillus atrophaeus 1942   2 2
No Yes Bacillus subtilis subsp. subtilis str. 168   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus halodurans C-125   3 3
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Gemmatimonas aurantiaca T-27   3 3
No Yes Melioribacter roseus P3M   4 4
No Yes Ignavibacterium album JCM 16511   5 5
No Yes Pelodictyon phaeoclathratiforme BU-1   2 2
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   2 2
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   2 2
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   13 13
No Yes Saprospira grandis str. Lewin   3 3
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   3 3
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Flexibacter litoralis DSM 6794   6 6
No Yes Candidatus Cardinium hertigii   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Marivirga tractuosa DSM 4126   5 5
No Yes Fibrella aestuarina   2 2
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   2 2
No Yes Cytophaga hutchinsonii ATCC 33406   2 2
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Parabacteroides distasonis ATCC 8503   2 2
No Yes Tannerella forsythia ATCC 43037   3 3
No Yes Paludibacter propionicigenes WB4   3 3
No Yes Odoribacter splanchnicus DSM 20712   2 2
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   2 2
No Yes Prevotella intermedia 17   3 3
No Yes Prevotella denticola F0289   2 2
No Yes Prevotella ruminicola 23   3 3
No Yes Porphyromonas asaccharolytica DSM 20707   2 2
No Yes Porphyromonas gingivalis ATCC 33277   2 2
No Yes Bacteroides salanitronis DSM 18170   2 2
No Yes Bacteroides helcogenes P 36-108   2 2
No Yes Bacteroides vulgatus ATCC 8482   3 3
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Bacteroides fragilis YCH46   3 3
No Yes Pedobacter saltans DSM 12145   2 2
No Yes Sphingobacterium sp. 21   2 2
No Yes Fluviicola taffensis DSM 16823   2 2
No Yes Owenweeksia hongkongensis DSM 17368   2 2
No Yes Zunongwangia profunda SM-A87   2 2
No Yes Krokinobacter sp. 4H-3-7-5   3 3
No Yes Gramella forsetii KT0803   2 2
No Yes Lacinutrix sp. 5H-3-7-4   2 2
No Yes Maribacter sp. HTCC2170   2 2
No Yes Robiginitalea biformata HTCC2501   3 3
No Yes Croceibacter atlanticus HTCC2559   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   4 4
No Yes Muricauda ruestringensis DSM 13258   4 4
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Cellulophaga lytica DSM 7489   4 4
No Yes Polaribacter sp. MED152   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   2 2
No Yes Capnocytophaga canimorsus Cc5   2 2
No Yes Capnocytophaga ochracea DSM 7271   3 3
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   2 2
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 3
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Aminobacterium colombiense DSM 12261   2 2
No Yes Thermanaerovibrio acidaminovorans DSM 6589   1 1
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Turneriella parva DSM 21527   3 3
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   2 2
No Yes Leptospira interrogans serovar Lai str. IPAV   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   2 2
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Borrelia garinii PBi   2 2
No Yes Borrelia bissettii DN127   2 2
No Yes Borrelia afzelii PKo   2 2
No Yes Borrelia burgdorferi B31   2 2
No Yes Borrelia recurrentis A1   2 2
No Yes Borrelia duttonii Ly   2 2
No Yes Borrelia crocidurae str. Achema   2 2
No Yes Borrelia turicatae 91E135   2 2
No Yes Borrelia hermsii DAH   2 2
No Yes Spirochaeta smaragdinae DSM 11293   4 4
No Yes Spirochaeta caldaria DSM 7334   3 3
No Yes Treponema azotonutricium ZAS-9   4 4
No Yes Treponema primitia ZAS-2   5 5
No Yes Treponema brennaborense DSM 12168   3 3
No Yes Treponema paraluiscuniculi Cuniculi A   2 2
No Yes Treponema succinifaciens DSM 2489   2 2
No Yes Treponema pallidum subsp. pallidum SS14   3 3
No Yes Treponema denticola ATCC 35405   2 2
No Yes Spirochaeta africana DSM 8902   4 4
No Yes Spirochaeta thermophila DSM 6192   4 4
No Yes Thermodesulfatator indicus DSM 15286   2 2
No Yes Thermodesulfobacterium sp. OPB45   2 2
No Yes Desulfurispirillum indicum S5   2 2
No Yes Calditerrivibrio nitroreducens DSM 19672   3 3
No Yes Denitrovibrio acetiphilus DSM 12809   3 3
No Yes Deferribacter desulfuricans SSM1   2 2
No Yes Flexistipes sinusarabici DSM 4947   2 2
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermovibrio ammonificans HB-1   4 4
No Yes Desulfurobacterium thermolithotrophum DSM 11699   3 3
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Sulfurihydrogenibium azorense Az-Fu1   1 1
No Yes Persephonella marina EX-H1   6 6
No Yes Thermocrinis albus DSM 14484   2 2
No Yes Aquifex aeolicus VF5   4 4
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Candidatus Chloracidobacterium thermophilum B   4 4
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella tundricola MP5ACTX9   2 2
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Candidatus Koribacter versatilis Ellin345   2 2
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Terriglobus roseus DSM 18391   2 2
No Yes Acidobacterium capsulatum ATCC 51196   2 2
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 2
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Acidithiobacillus ferrivorans SS3   2 2
No Yes Acidithiobacillus caldus SM-1   3 3
No Yes Acidithiobacillus ferrooxidans ATCC 53993   2 2
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Nautilia profundicola AmH   2 2
No Yes Nitratifractor salsuginis DSM 16511   3 3
No Yes Sulfurospirillum deleyianum DSM 6946   2 2
No Yes Sulfurospirillum barnesii SES-3   2 2
No Yes Arcobacter sp. L   2 2
No Yes Arcobacter nitrofigilis DSM 7299   2 2
No Yes Arcobacter butzleri RM4018   2 2
No Yes Campylobacter hominis ATCC BAA-381   2 2
No Yes Campylobacter lari RM2100   2 2
No Yes Campylobacter curvus 525.92   2 2
No Yes Campylobacter concisus 13826   2 2
No Yes Campylobacter jejuni subsp. doylei 269.97   1 1
No Yes Campylobacter sp. 03-427   2 2
No Yes Campylobacter fetus subsp. fetus 82-40   2 2
No Yes uncultured Sulfuricurvum sp. RIFRC-1   2 2
No Yes Sulfuricurvum kujiense DSM 16994   2 2
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Sulfurimonas denitrificans DSM 1251   2 2
No Yes Wolinella succinogenes DSM 1740   2 2
No Yes Helicobacter cetorum MIT 00-7128   1 1
No Yes Helicobacter bizzozeronii CIII-1   1 1
No Yes Helicobacter hepaticus ATCC 51449   3 3
No Yes Helicobacter mustelae 12198   1 1
No Yes Helicobacter felis ATCC 49179   2 2
No Yes Helicobacter cinaedi PAGU611   3 3
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Helicobacter pylori B38   1 1
No Yes Nitratiruptor sp. SB155-2   2 2
No Yes Sulfurovum sp. NBC37-1   4 4
No Yes Desulfarculus baarsii DSM 2075   6 6
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophus aciditrophicus SB   4 4
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Syntrophobacter fumaroxidans MPOB   4 4
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfotalea psychrophila LSv54   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   7 6
No Yes Desulfobacterium autotrophicum HRM2   4 4
No Yes Desulfococcus oleovorans Hxd3   3 3
No Yes Desulfohalobium retbaense DSM 5692   3 3
No Yes Desulfomicrobium baculatum DSM 4028   2 2
No Yes Desulfovibrio piezophilus   4 4
No Yes Desulfovibrio aespoeensis Aspo-2   4 4
No Yes Desulfovibrio magneticus RS-1   4 4
No Yes Desulfovibrio alaskensis G20   5 5
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   3 3
No Yes Desulfovibrio salexigens DSM 2638   5 5
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   3 3
No Yes Desulfovibrio africanus str. Walvis Bay   2 2
No Yes Hippea maritima DSM 10411   2 2
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter sp. M21   5 5
No Yes Geobacter uraniireducens Rf4   5 5
No Yes Geobacter lovleyi SZ   3 3
No Yes Geobacter bemidjiensis Bem   5 5
No Yes Geobacter sulfurreducens KN400   4 4
No Yes Geobacter metallireducens GS-15   4 4
No Yes Pelobacter propionicus DSM 2379   5 5
No Yes Pelobacter carbinolicus DSM 2380   3 3
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   4 4
No Yes Thauera sp. MZ1T   5 5
No Yes Azoarcus sp. KH32C   5 5
No Yes Azoarcus sp. BH72   5 5
No Yes Aromatoleum aromaticum EbN1   4 4
No Yes Dechlorosoma suillum PS   6 6
No Yes Pseudogulbenkiania sp. NH8B   5 5
No Yes Laribacter hongkongensis HLHK9   5 5
No Yes Chromobacterium violaceum ATCC 12472   5 5
No Yes Neisseria meningitidis alpha14   2 2
No Yes Neisseria meningitidis FAM18   2 2
No Yes Neisseria lactamica 020-06   2 2
No Yes Neisseria gonorrhoeae NCCP11945   2 2
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   5 5
No Yes beta proteobacterium CB   2 2
No Yes Methylibium petroleiphilum PM1   3 3
No Yes Thiomonas arsenitoxydans   4 4
No Yes Thiomonas intermedia K12   4 4
No Yes Rubrivivax gelatinosus IL144   3 3
No Yes Leptothrix cholodnii SP-6   3 3
No Yes Burkholderia rhizoxinica HKI 454   2 2
No Yes Burkholderia phytofirmans PsJN   2 2
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia xenovorans LB400   2 2
No Yes Ralstonia eutropha JMP134   2 2
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Cupriavidus metallidurans CH34   3 3
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   3 3
No Yes Ralstonia pickettii 12D   3 3
No Yes Ralstonia solanacearum CFBP2957   3 3
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   2 2
No Yes Burkholderia sp. RPE64   2 2
No Yes Burkholderia sp. CCGE1002   2 2
No Yes Burkholderia thailandensis E264   2 2
No Yes Burkholderia pseudomallei 1106a   3 3
No Yes Burkholderia mallei SAVP1   2 2
No Yes Burkholderia ambifaria AMMD   2 2
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   2 2
No Yes Burkholderia glumae BGR1   2 2
No Yes Verminephrobacter eiseniae EF01-2   3 3
No Yes Alicycliphilus denitrificans K601   4 4
No Yes Ramlibacter tataouinensis TTB310   4 4
No Yes Delftia sp. Cs1-4   3 3
No Yes Delftia acidovorans SPH-1   3 3
No Yes Polaromonas sp. JS666   2 2
No Yes Polaromonas naphthalenivorans CJ2   2 2
No Yes Variovorax paradoxus S110   3 3
No Yes Rhodoferax ferrireducens T118   3 3
No Yes Acidovorax ebreus TPSY   2 2
No Yes Acidovorax sp. KKS102   4 4
No Yes Acidovorax sp. JS42   2 2
No Yes Acidovorax citrulli AAC00-1   3 3
No Yes Acidovorax avenae subsp. avenae ATCC 19860   3 3
No Yes Comamonas testosteroni CNB-2   4 4
No Yes Herminiimonas arsenicoxydans   4 4
No Yes Collimonas fungivorans Ter331   3 3
No Yes Janthinobacterium sp. Marseille   4 4
No Yes Herbaspirillum seropedicae SmR1   4 4
No Yes Pusillimonas sp. T7-7   4 4
No Yes Advenella kashmirensis WT001   2 2
No Yes Taylorella asinigenitalis MCE3   2 2
No Yes Taylorella equigenitalis MCE9   2 2
No Yes Bordetella petrii DSM 12804   5 5
No Yes Bordetella avium 197N   4 4
No Yes Bordetella pertussis Tohama I   3 3
No Yes Bordetella parapertussis 12822   3 3
No Yes Bordetella bronchiseptica RB50   3 3
No Yes Achromobacter xylosoxidans A8   3 3
No Yes Achromobacter xylosoxidans   4 4
No Yes Thiobacillus denitrificans ATCC 25259   3 3
No Yes Nitrosospira multiformis ATCC 25196   3 3
No Yes Nitrosomonas sp. Is79A3   4 4
No Yes Nitrosomonas eutropha C91   3 3
No Yes Nitrosomonas europaea ATCC 19718   3 3
No Yes Sideroxydans lithotrophicus ES-1   3 3
No Yes Gallionella capsiferriformans ES-2   5 5
No Yes Methylotenera versatilis 301   4 4
No Yes Methylotenera mobilis JLW8   4 4
No Yes Methylovorus sp. MP688   3 3
No Yes Methylovorus glucosetrophus SIP3-4   3 3
No Yes Methylobacillus flagellatus KT   3 3
No Yes Magnetococcus marinus MC-1   20 15
No Yes Parvularcula bermudensis HTCC2503   3 3
No Yes Asticcacaulis excentricus CB 48   4 4
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   2 2
No Yes Caulobacter crescentus NA1000   2 2
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   3 3
No Yes Erythrobacter litoralis HTCC2594   5 5
No Yes Sphingopyxis alaskensis RB2256   4 4
No Yes Novosphingobium sp. PP1Y   3 3
No Yes Novosphingobium aromaticivorans DSM 12444   4 4
No Yes Sphingobium sp. SYK-6   4 4
No Yes Sphingobium japonicum UT26S   3 3
No Yes Sphingobium chlorophenolicum L-1   3 3
No Yes Sphingomonas sp. MM-1   4 4
No Yes Sphingomonas wittichii RW1   6 6
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Maricaulis maris MCS10   3 3
No Yes Hirschia baltica ATCC 49814   3 3
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   2 2
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   2 2
No Yes Ruegeria sp. TM1040   2 2
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   3 3
No Yes Rhodobacter capsulatus SB 1003   3 3
No Yes Paracoccus denitrificans PD1222   2 2
No Yes Rhodospirillum photometricum DSM 122   3 3
No Yes Tistrella mobilis KA081020-065   2 2
No Yes Magnetospirillum magneticum AMB-1   3 3
No Yes Rhodospirillum centenum SW   3 3
No Yes Rhodospirillum rubrum F11   2 2
No Yes Azospirillum lipoferum 4B   4 4
No Yes Azospirillum sp. B510   6 6
No Yes Azospirillum brasilense Sp245   5 5
No Yes Granulibacter bethesdensis CGDNIH1   2 2
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Acidiphilium multivorum AIU301   2 2
No Yes Acidiphilium cryptum JF-5   2 2
No Yes Acetobacter pasteurianus IFO 3283-01   2 2
No Yes Polymorphum gilvum SL003B-26A1   2 2
No Yes Micavibrio aeruginosavorus ARL-13   2 2
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   1 1
No Yes Rickettsia philipii str. 364D   1 1
No Yes Rickettsia heilongjiangensis 054   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia slovaca 13-B   1 1
No Yes Rickettsia parkeri str. Portsmouth   1 1
No Yes Rickettsia massiliae MTU5   1 1
No Yes Rickettsia japonica YH   1 1
No Yes Rickettsia africae ESF-5   1 1
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   1 1
No Yes Rickettsia montanensis str. OSU 85-930   1 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   1 1
No Yes Rickettsia conorii str. Malish 7   1 1
No Yes Starkeya novella DSM 506   2 2
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium chloromethanicum CM4   2 2
No Yes Methylobacterium extorquens AM1   3 3
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   2 2
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Methylobacterium radiotolerans JCM 2831   2 2
No Yes Parvibaculum lavamentivorans DS-1   6 6
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Brucella microti CCM 4915   2 2
No Yes Brucella pinnipedialis B2/94   2 2
No Yes Brucella canis ATCC 23365   2 2
No Yes Brucella suis ATCC 23445   3 3
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   2 2
No Yes Sinorhizobium fredii NGR234   2 2
No Yes Sinorhizobium medicae WSM419   2 2
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Genome sequence of Rhizobium sp. strain IRBG74   3 3
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium tumefaciens str. C58   3 3
No Yes Agrobacterium radiobacter K84   3 3
No Yes Agrobacterium sp. H13-3   3 3
No Yes Agrobacterium vitis S4   2 2
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 2
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   2 2
No Yes Hyphomicrobium sp. MC1   4 4
No Yes Hyphomicrobium denitrificans ATCC 51888   3 3
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   2 2
No Yes Methylocystis sp. SC2   2 2
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Saccharophagus degradans 2-40   4 4
No Yes Teredinibacter turnerae T7901   4 4
No Yes Cellvibrio japonicus Ueda107   4 4
No Yes Aggregatibacter aphrophilus NJ8700   2 2
No Yes Aggregatibacter actinomycetemcomitans D7S-1   2 2
No Yes Haemophilus somnus 129PT   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   2 2
No Yes Haemophilus parasuis SH0165   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Haemophilus parainfluenzae T3T1   2 2
No Yes Haemophilus influenzae PittEE   2 2
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Oceanimonas sp. GK1   4 4
No Yes Tolumonas auensis DSM 9187   3 3
No Yes Aeromonas veronii B565   3 3
No Yes Aeromonas salmonicida subsp. salmonicida A449   3 3
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   3 3
No Yes Aliivibrio salmonicida LFI1238   5 5
No Yes Vibrio fischeri MJ11   5 5
No Yes Vibrio sp. Ex25   5 5
No Yes Vibrio harveyi ATCC BAA-1116   6 6
No Yes Vibrio parahaemolyticus RIMD 2210633   5 5
No Yes Vibrio splendidus LGP32   5 5
No Yes Vibrio anguillarum 775   5 5
No Yes Vibrio furnissii NCTC 11218   6 6
No Yes Vibrio vulnificus MO6-24/O   5 5
No Yes Vibrio cholerae O395   5 5
No Yes Photobacterium profundum SS9   6 6
No Yes Psychromonas ingrahamii 37   3 3
No Yes Psychromonas sp. CNPT3   4 4
No Yes Idiomarina loihiensis L2TR   3 3
No Yes Ferrimonas balearica DSM 9799   4 4
No Yes Shewanella piezotolerans WP3   3 3
No Yes Shewanella loihica PV-4   3 3
No Yes Shewanella halifaxensis HAW-EB4   3 3
No Yes Shewanella sediminis HAW-EB3   3 3
No Yes Shewanella denitrificans OS217   3 3
No Yes Shewanella pealeana ATCC 700345   5 5
No Yes Shewanella oneidensis MR-1   3 3
No Yes Shewanella baltica OS185   3 3
No Yes Shewanella woodyi ATCC 51908   3 3
No Yes Shewanella sp. MR-4   4 4
No Yes Shewanella amazonensis SB2B   3 3
No Yes Shewanella violacea DSS12   3 3
No Yes Shewanella frigidimarina NCIMB 400   3 3
No Yes Shewanella putrefaciens CN-32   4 4
No Yes Colwellia psychrerythraea 34H   3 3
No Yes Pseudoalteromonas sp. SM9913   5 5
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Pseudoalteromonas haloplanktis TAC125   4 4
No Yes Glaciecola sp. 4H-3-7+YE-5   3 3
No Yes Glaciecola nitratireducens FR1064   4 4
No Yes Marinobacter adhaerens HP15   3 3
No Yes Marinobacter sp. BSs20148   4 4
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   3 3
No Yes Marinobacter aquaeolei VT8   3 3
No Yes Alteromonas sp. SN2   3 3
No Yes Alteromonas macleodii str. 'Deep ecotype'   3 3
No Yes Kangiella koreensis DSM 16069   5 5
No Yes Hahella chejuensis KCTC 2396   3 3
No Yes Alcanivorax borkumensis SK2   5 5
No Yes Marinomonas posidonica IVIA-Po-181   7 7
No Yes Marinomonas sp. MWYL1   6 6
No Yes Marinomonas mediterranea MMB-1   6 6
No Yes Chromohalobacter salexigens DSM 3043   4 4
No Yes Halomonas elongata DSM 2581   4 4
No Yes Methylomicrobium alcaliphilum   6 5
No Yes Methylomonas methanica MC09   5 5
No Yes Methylococcus capsulatus str. Bath   3 3
No Yes Dichelobacter nodosus VCS1703A   2 2
No Yes Rhodanobacter denitrificans   4 3
No Yes Frateuria aurantia DSM 6220   4 3
No Yes Pseudoxanthomonas spadix BD-a59   5 4
No Yes Pseudoxanthomonas suwonensis 11-1   5 4
No Yes Stenotrophomonas maltophilia K279a   5 4
No Yes Xylella fastidiosa M23   4 3
No Yes Xanthomonas axonopodis pv. citri str. 306   5 4
No Yes Xanthomonas albilineans GPE PC73   4 3
No Yes Xanthomonas oryzae pv. oryzae PXO99A   5 4
No Yes Xanthomonas campestris pv. campestris str. B100   4 3
No Yes Halothiobacillus neapolitanus c2   3 3
No Yes Spiribacter sp. UAH-SP71   3 3
No Yes Alkalilimnicola ehrlichii MLHE-1   3 3
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   4 4
No Yes Thioalkalivibrio sp. K90mix   4 4
No Yes Halorhodospira halophila SL1   3 3
No Yes Allochromatium vinosum DSM 180   3 3
No Yes Thiocystis violascens DSM 198   3 3
No Yes Nitrosococcus watsonii C-113   3 3
No Yes Nitrosococcus halophilus Nc4   3 3
No Yes Nitrosococcus oceani ATCC 19707   3 3
No Yes Coxiella burnetii Dugway 5J108-111   4 4
No Yes Legionella longbeachae NSW150   5 5
No Yes Legionella pneumophila str. Corby   6 6
No Yes gamma proteobacterium HdN1   4 4
No Yes Photorhabdus asymbiotica   4 4
No Yes Photorhabdus luminescens subsp. laumondii TTO1   3 3
No Yes Xenorhabdus bovienii SS-2004   3 3
No Yes Xenorhabdus nematophila ATCC 19061   3 3
No Yes Providencia stuartii MRSN 2154   5 5
No Yes Proteus mirabilis HI4320   4 4
No Yes Edwardsiella ictaluri 93-146   3 3
No Yes Edwardsiella tarda EIB202   3 3
No Yes Rahnella sp. Y9602   3 3
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 3
No Yes Yersinia pseudotuberculosis IP 31758   4 4
No Yes Yersinia pestis Pestoides F   4 4
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   3 3
No Yes Serratia sp. AS12   4 4
No Yes Serratia sp. ATCC 39006   3 3
No Yes Serratia plymuthica AS9   4 4
No Yes Serratia proteamaculans 568   4 4
No Yes Dickeya dadantii Ech703   3 3
No Yes Dickeya zeae Ech1591   3 3
No Yes Pectobacterium wasabiae WPP163   3 3
No Yes Pectobacterium sp. SCC3193   3 3
No Yes Pectobacterium atrosepticum SCRI1043   3 3
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Sodalis glossinidius str. 'morsitans'   3 3
No Yes Pantoea sp. At-9b   4 4
No Yes Pantoea vagans C9-1   3 3
No Yes Pantoea ananatis LMG 20103   4 4
No Yes Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis   1 1
No Yes Erwinia tasmaniensis Et1/99   4 4
No Yes Erwinia sp. Ejp617   4 4
No Yes Erwinia billingiae Eb661   4 4
No Yes Erwinia pyrifoliae Ep1/96   4 4
No Yes Erwinia amylovora ATCC 49946   4 4
No Yes Escherichia blattae DSM 4481   4 4
No Yes Cronobacter turicensis z3032   4 4
No Yes Cronobacter sakazakii ES15   4 4
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Enterobacteriaceae bacterium strain FGI 57   4 4
No Yes Shigella sonnei Ss046   4 4
No Yes Shigella flexneri 5 str. 8401   4 4
No Yes Shigella dysenteriae Sd197   4 4
No Yes Shigella boydii CDC 3083-94   4 4
No Yes Salmonella bongori NCTC 12419   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   4 4
No Yes Klebsiella oxytoca E718   4 4
No Yes Klebsiella variicola At-22   4 4
No Yes Klebsiella pneumoniae NTUH-K2044   4 4
No Yes Enterobacter aerogenes KCTC 2190   4 4
No Yes Escherichia fergusonii ATCC 35469   4 4
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   4 4
No Yes Enterobacter sp. R4-368   4 4
No Yes Enterobacter sp. 638   4 4
No Yes Enterobacter asburiae LF7a   4 4
No Yes Enterobacter cloacae subsp. dissolvens SDM   4 4
No Yes Citrobacter rodentium ICC168   4 4
No Yes Citrobacter koseri ATCC BAA-895   4 4
No Yes Azotobacter vinelandii DJ   3 3
No Yes Pseudomonas sp. TKP   5 5
No Yes Pseudomonas sp. UW4   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   4 4
No Yes Pseudomonas entomophila L48   5 5
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 3
No Yes Pseudomonas stutzeri A1501   6 5
No Yes Pseudomonas fulva 12-X   4 4
No Yes Pseudomonas putida F1   5 5
No Yes Pseudomonas protegens Pf-5   3 3
No Yes Pseudomonas fluorescens SBW25   3 3
No Yes Pseudomonas mendocina ymp   4 4
No Yes Pseudomonas aeruginosa UCBPP-PA14   6 5
No Yes Pseudomonas sp. VLB120   4 4
No Yes Psychrobacter sp. G   2 2
No Yes Psychrobacter sp. PRwf-1   2 2
No Yes Psychrobacter arcticus 273-4   2 2
No Yes Psychrobacter cryohalolentis K5   2 2
No Yes Moraxella catarrhalis RH4   2 2
No Yes Acinetobacter oleivorans DR1   3 3
No Yes Acinetobacter calcoaceticus PHEA-2   3 3
No Yes Acinetobacter baumannii ATCC 17978   3 3
No Yes Acinetobacter sp. ADP1   2 2
No Yes Methylophaga sp. JAM1   3 3
No Yes Cycloclasticus sp. P1   3 3
No Yes Thiomicrospira crunogena XCL-2   3 3
No Yes Thioalkalimicrobium cyclicum ALM1   2 2
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   1 1
No Yes Francisella sp. TX077308   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Francisella tularensis subsp. tularensis WY96-3418   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Chroococcidiopsis thermalis PCC 7203   2 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Deinococcus peraridilitoris DSM 19664   2 1
No Yes Thermus oshimai JL-2   2 1
No Yes Thermus thermophilus JL-18   2 1
No Yes Thermus thermophilus SG0.5JP17-16   2 1
No Yes Thermus thermophilus HB8   2 1
No Yes Clostridium acidurici 9a   3 3
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Thermoanaerobacter sp. X513   2 2
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   2 2
No Yes Geobacillus sp. C56-T3   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Amphibacillus xylanus NBRC 15112   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   2 2
No Yes Bacillus amyloliquefaciens LFB112   2 2
No Yes Bacillus amyloliquefaciens CC178   2 2
No Yes Bacillus amyloliquefaciens Y2   2 2
No Yes Bacillus amyloliquefaciens IT-45   2 2
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   2 2
No Yes Bacillus licheniformis 9945A   2 2
No Yes Bacillus subtilis PY79   2 2
No Yes Bacillus subtilis XF-1   2 2
No Yes Bacillus subtilis QB928   2 2
No Yes Bacillus subtilis BSn5   2 2
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   2 2
No Yes Bacillus subtilis subsp. subtilis str. BSP1   2 2
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   2 2
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   2 2
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   2 2
No Yes Bacillus subtilis subsp. spizizenii str. W23   2 2
No Yes Bacillus subtilis subsp. natto BEST195   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus infantis NRRL B-14911   2 2
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Salinibacter ruber DSM 13855   2 2
No Yes Rhodothermus marinus SG0.5JP17-172   1 1
No Yes Echinicola vietnamensis DSM 17526   3 3
No Yes Emticicia oligotrophica DSM 17448   2 2
No Yes Prevotella sp. oral taxon 299 str. F0039   3 3
No Yes Prevotella dentalis DSM 3688   2 2
No Yes Porphyromonas gingivalis TDC60   2 2
No Yes Porphyromonas gingivalis W83   2 2
No Yes Bacteroides xylanisolvens XB1A   2 2
No Yes Bacteroides fragilis 638R   3 3
No Yes Bacteroides fragilis NCTC 9343   3 3
No Yes Nonlabens dokdonensis DSW-6   2 2
No Yes Psychroflexus torquis ATCC 700755   3 3
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 3
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   2 2
No Yes Leptospira interrogans serovar Lai str. 56601   2 2
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   2 2
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Borrelia garinii NMJW1   2 2
No Yes Borrelia garinii BgVir   2 2
No Yes Borrelia afzelii HLJ01   2 2
No Yes Borrelia afzelii PKo   2 2
No Yes Borrelia burgdorferi CA382   2 2
No Yes Borrelia burgdorferi JD1   2 2
No Yes Borrelia burgdorferi N40   2 2
No Yes Borrelia burgdorferi ZS7   2 2
No Yes Borrelia miyamotoi LB-2001   2 2
No Yes Treponema pedis str. T A4   4 4
No Yes Treponema pallidum str. Fribourg-Blanc   2 2
No Yes Treponema pallidum subsp. pertenue str. Gauthier   2 2
No Yes Treponema pallidum subsp. pertenue str. CDC2   3 3
No Yes Treponema pallidum subsp. pertenue str. SamoaD   2 2
No Yes Treponema pallidum subsp. pallidum str. Mexico A   2 2
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   2 2
No Yes Treponema pallidum subsp. pallidum str. Nichols   2 2
No Yes Spirochaeta thermophila DSM 6578   4 4
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   2 2
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Arcobacter butzleri 7h1h   2 2
No Yes Arcobacter butzleri ED-1   2 2
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   2 2
No Yes Campylobacter jejuni RM1221   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2544   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   1 1
No Yes Campylobacter jejuni subsp. jejuni PT14   1 1
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   2 2
No Yes Campylobacter jejuni subsp. jejuni S3   2 2
No Yes Campylobacter jejuni subsp. jejuni M1   2 2
No Yes Campylobacter jejuni subsp. jejuni IA3902   1 1
No Yes Campylobacter jejuni subsp. jejuni 81116   2 2
No Yes Campylobacter jejuni subsp. jejuni 81-176   2 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   1 1
No Yes Campylobacter coli 76339   2 2
No Yes Campylobacter coli 15-537360   2 2
No Yes Campylobacter coli CVM N29710   2 2
No Yes Helicobacter cetorum MIT 99-5656   2 2
No Yes Helicobacter pylori BM012S   1 1
No Yes Helicobacter pylori BM012A   1 1
No Yes Helicobacter pylori SouthAfrica20   1 1
No Yes Helicobacter pylori UM298   1 1
No Yes Helicobacter pylori UM066   1 1
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori UM299   1 1
No Yes Helicobacter pylori UM032   1 1
No Yes Helicobacter pylori OK310   1 1
No Yes Helicobacter pylori OK113   1 1
No Yes Helicobacter pylori Rif2   1 1
No Yes Helicobacter pylori Rif1   1 1
No Yes Helicobacter pylori HUP-B14   2 2
No Yes Helicobacter pylori PeCan18   1 1
No Yes Helicobacter pylori Shi169   1 1
No Yes Helicobacter pylori Shi112   2 2
No Yes Helicobacter pylori Shi417   1 1
No Yes Helicobacter pylori XZ274   1 1
No Yes Helicobacter pylori Aklavik86   1 1
No Yes Helicobacter pylori Aklavik117   1 1
No Yes Helicobacter pylori SNT49   1 1
No Yes Helicobacter pylori Puno135   1 1
No Yes Helicobacter pylori Puno120   1 1
No Yes Helicobacter pylori ELS37   1 1
No Yes Helicobacter pylori Gambia94/24   1 1
No Yes Helicobacter pylori SouthAfrica7   1 1
No Yes Helicobacter pylori India7   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 2017   1 1
No Yes Helicobacter pylori 2018   1 1
No Yes Helicobacter pylori 908   1 1
No Yes Helicobacter pylori F57   1 1
No Yes Helicobacter pylori F30   1 1
No Yes Helicobacter pylori F16   1 1
No Yes Helicobacter pylori Sat464   1 1
No Yes Helicobacter pylori Cuz20   1 1
No Yes Helicobacter pylori PeCan4   1 1
No Yes Helicobacter pylori SJM180   2 2
No Yes Helicobacter pylori B8   1 1
No Yes Helicobacter pylori 52   2 2
No Yes Helicobacter pylori v225d   1 1
No Yes Helicobacter pylori 83   1 1
No Yes Helicobacter pylori 35A   1 1
No Yes Helicobacter pylori P12   2 2
No Yes Helicobacter pylori G27   1 1
No Yes Helicobacter pylori Shi470   1 1
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori 51   1 1
No Yes Helicobacter pylori F32   2 2
No Yes Helicobacter pylori J99   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Desulfobacula toluolica Tol2   4 4
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   10 10
No Yes Desulfovibrio vulgaris RCH1   3 3
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   3 3
No Yes Desulfovibrio vulgaris str. Hildenborough   3 3
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   7 6
No Yes Desulfovibrio desulfuricans ND132   4 4
No Yes Geobacter sp. M18   4 4
No Yes Geobacter sulfurreducens PCA   4 4
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Neisseria meningitidis WUE 2594   2 2
No Yes Neisseria meningitidis G2136   2 2
No Yes Neisseria meningitidis M04-240196   2 2
No Yes Neisseria meningitidis M01-240149   2 2
No Yes Neisseria meningitidis NZ-05/33   2 2
No Yes Neisseria meningitidis M01-240355   2 2
No Yes Neisseria meningitidis 8013   2 2
No Yes Neisseria meningitidis 053442   2 2
No Yes Neisseria meningitidis Z2491   2 2
No Yes Neisseria meningitidis H44/76   2 2
No Yes Neisseria meningitidis alpha710   2 2
No Yes Neisseria meningitidis MC58   2 2
No Yes Neisseria gonorrhoeae TCDC-NG08107   2 2
No Yes Neisseria gonorrhoeae FA 1090   2 2
No Yes Burkholderia phenoliruptrix BR3459a   2 2
No Yes Pandoraea pnomenusa 3kgm   3 3
No Yes Ralstonia pickettii 12J   3 3
No Yes Ralstonia solanacearum FQY_4   3 3
No Yes Ralstonia solanacearum Po82   3 3
No Yes Ralstonia solanacearum PSI07   2 2
No Yes Ralstonia solanacearum CMR15   3 3
No Yes Ralstonia solanacearum GMI1000   3 3
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   2 2
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. CCGE1003   2 2
No Yes Burkholderia sp. CCGE1001   2 2
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia thailandensis MSMB121   2 2
No Yes Burkholderia pseudomallei MSHR305   3 3
No Yes Burkholderia pseudomallei NCTC 13179   3 3
No Yes Burkholderia pseudomallei BPC006   3 3
No Yes Burkholderia pseudomallei 1026b   3 3
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   3 3
No Yes Burkholderia pseudomallei 1710b   3 3
No Yes Burkholderia pseudomallei K96243   3 3
No Yes Burkholderia mallei NCTC 10229   3 3
No Yes Burkholderia mallei NCTC 10247   3 3
No Yes Burkholderia mallei ATCC 23344   2 2
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   2 2
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   3 3
No Yes Alicycliphilus denitrificans BC   4 4
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   3 3
No Yes Taylorella asinigenitalis 14/45   2 2
No Yes Taylorella equigenitalis 14/56   2 2
No Yes Taylorella equigenitalis ATCC 35865   2 2
No Yes Bordetella pertussis CS   3 3
No Yes Bordetella parapertussis 18323   3 3
No Yes Bordetella parapertussis Bpp5   3 3
No Yes Bordetella bronchiseptica MO149   3 3
No Yes Bordetella bronchiseptica 253   3 3
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   4 4
No Yes Nitrosomonas sp. AL212   4 4
No Yes Sulfuricella denitrificans skB26   4 4
No Yes Caulobacter crescentus CB15   2 2
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   2 2
No Yes Phaeobacter gallaeciensis DSM 26640   2 2
No Yes Leisingera methylohalidivorans DSM 14336   2 2
No Yes Octadecabacter antarcticus 307   2 2
No Yes Octadecabacter arcticus 238   2 2
No Yes Rhodobacter sphaeroides KD131   3 3
No Yes Rhodobacter sphaeroides ATCC 17025   3 3
No Yes Rhodobacter sphaeroides 2.4.1   3 3
No Yes Paracoccus aminophilus JCM 7686   2 2
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   3 3
No Yes Rhodospirillum rubrum ATCC 11170   2 2
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Gluconobacter oxydans H24   1 1
No Yes Acetobacter pasteurianus 386B   2 2
No Yes Acetobacter pasteurianus IFO 3283-12   2 2
No Yes Acetobacter pasteurianus IFO 3283-01-42C   2 2
No Yes Acetobacter pasteurianus IFO 3283-32   2 2
No Yes Acetobacter pasteurianus IFO 3283-26   2 2
No Yes Acetobacter pasteurianus IFO 3283-22   2 2
No Yes Acetobacter pasteurianus IFO 3283-07   2 2
No Yes Acetobacter pasteurianus IFO 3283-03   2 2
No Yes Micavibrio aeruginosavorus EPB   2 2
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia canadensis str. CA410   1 1
No Yes Rickettsia typhi str. B9991CWPP   1 1
No Yes Rickettsia typhi str. TH1527   1 1
No Yes Rickettsia prowazekii str. Breinl   1 1
No Yes Rickettsia prowazekii str. NMRC Madrid E   1 1
No Yes Rickettsia prowazekii str. RpGvF24   1 1
No Yes Rickettsia prowazekii str. GvV257   1 1
No Yes Rickettsia prowazekii str. Dachau   1 1
No Yes Rickettsia prowazekii str. Katsinyian   1 1
No Yes Rickettsia prowazekii str. Chernikova   1 1
No Yes Rickettsia prowazekii Rp22   1 1
No Yes Rickettsia prowazekii str. Madrid E   1 1
No Yes Rickettsia slovaca str. D-CWPP   1 1
No Yes Rickettsia massiliae str. AZT80   1 1
No Yes Rickettsia rickettsii str. Arizona   1 1
No Yes Rickettsia rickettsii str. Brazil   1 1
No Yes Rickettsia rickettsii str. Hauke   1 1
No Yes Rickettsia rickettsii str. Colombia   1 1
No Yes Rickettsia rickettsii str. Hlp#2   1 1
No Yes Rickettsia rickettsii str. Hino   1 1
No Yes Rickettsia rickettsii str. Iowa   1 1
No Yes Methylobacterium extorquens DM4   2 2
No Yes Methylobacterium extorquens PA1   2 2
No Yes Brucella ceti TE10759-12   2 2
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   2 2
No Yes Brucella suis VBI22   2 2
No Yes Brucella suis 1330   2 2
No Yes Brucella suis 1330   2 2
No Yes Brucella melitensis NI   2 2
No Yes Brucella melitensis M5-90   2 2
No Yes Brucella melitensis M28   2 2
No Yes Brucella melitensis bv. 1 str. 16M   2 2
No Yes Brucella abortus A13334   2 2
No Yes Brucella melitensis biovar Abortus 2308   2 2
No Yes Brucella abortus bv. 1 str. 9-941   2 2
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti 2011   3 3
No Yes Sinorhizobium meliloti GR4   3 3
No Yes Sinorhizobium meliloti Rm41   3 3
No Yes Sinorhizobium meliloti SM11   3 3
No Yes Sinorhizobium meliloti BL225C   3 3
No Yes Sinorhizobium meliloti 1021   3 3
No Yes Rhizobium etli CFN 42   2 2
No Yes Rhizobium etli bv. mimosae str. Mim1   2 2
No Yes Rhizobium tropici CIAT 899   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Liberibacter crescens BT-1   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   2 2
No Yes Hyphomicrobium denitrificans 1NES1   4 4
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   4 4
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   2 2
No Yes Aggregatibacter actinomycetemcomitans D11S-1   2 2
No Yes Haemophilus somnus 2336   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Pasteurella multocida 36950   2 2
No Yes Pasteurella multocida subsp. multocida str. HN06   2 2
No Yes Pasteurella multocida subsp. multocida str. Pm70   2 2
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Haemophilus influenzae KR494   2 2
No Yes Haemophilus influenzae F3047   2 2
No Yes Haemophilus influenzae F3031   2 2
No Yes Haemophilus influenzae 10810   2 2
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae 86-028NP   2 2
No Yes Haemophilus influenzae R2866   2 2
No Yes Haemophilus influenzae R2846   2 2
No Yes Haemophilus influenzae Rd KW20   2 2
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   3 3
No Yes Vibrio fischeri ES114   5 5
No Yes Vibrio sp. EJY3   5 5
No Yes Vibrio parahaemolyticus BB22OP   5 5
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   5 5
No Yes Vibrio anguillarum Listonella anguillarum M3   5 5
No Yes Vibrio nigripulchritudo VibrioScope   5 5
No Yes Vibrio vulnificus CMCP6   5 5
No Yes Vibrio vulnificus YJ016   5 5
No Yes Vibrio cholerae LMA3984-4   4 4
No Yes Vibrio cholerae M66-2   4 4
No Yes Vibrio cholerae O395   5 5
No Yes Vibrio cholerae IEC224   4 4
No Yes Vibrio cholerae O1 str. 2010EL-1786   4 4
No Yes Vibrio cholerae MJ-1236   4 4
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   4 4
No Yes Idiomarina loihiensis GSL 199   3 3
No Yes Shewanella sp. W3-18-1   4 4
No Yes Shewanella sp. ANA-3   4 4
No Yes Shewanella baltica BA175   3 3
No Yes Shewanella baltica OS678   3 3
No Yes Shewanella baltica OS117   3 3
No Yes Shewanella baltica OS223   3 3
No Yes Shewanella baltica OS195   3 3
No Yes Shewanella baltica OS155   3 3
No Yes Shewanella sp. MR-7   4 4
No Yes Shewanella putrefaciens 200   4 4
No Yes Glaciecola psychrophila 170   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   3 3
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   3 3
No Yes Alteromonas macleodii str. 'English Channel 615'   2 2
No Yes Alteromonas macleodii AltDE1   3 3
No Yes Alteromonas macleodii str. 'English Channel 673'   3 3
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   3 3
No Yes Alteromonas macleodii str. 'Black Sea 11'   3 3
No Yes Alteromonas macleodii ATCC 27126   3 3
No Yes Alcanivorax dieselolei B5   6 5
No Yes Thalassolituus oleivorans MIL-1   4 4
No Yes Stenotrophomonas maltophilia D457   5 4
No Yes Stenotrophomonas maltophilia JV3   5 4
No Yes Stenotrophomonas maltophilia R551-3   5 4
No Yes Xylella fastidiosa subsp. fastidiosa GB514   3 2
No Yes Xylella fastidiosa M12   4 3
No Yes Xylella fastidiosa Temecula1   4 3
No Yes Xylella fastidiosa 9a5c   4 3
No Yes Xanthomonas citri subsp. citri Aw12879   5 4
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   5 4
No Yes Xanthomonas axonopodis pv. citrumelo F1   5 4
No Yes Xanthomonas axonopodis Xac29-1   5 4
No Yes Xanthomonas oryzae pv. oryzicola BLS256   5 4
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   5 4
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   5 4
No Yes Xanthomonas campestris pv. raphani 756C   4 3
No Yes Xanthomonas campestris pv. campestris str. 8004   3 2
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   4 3
No Yes Spiribacter salinus M19-40   3 3
No Yes Thioalkalivibrio nitratireducens DSM 14787   3 3
No Yes Thioflavicoccus mobilis 8321   4 4
No Yes Coxiella burnetii CbuK_Q154   4 4
No Yes Coxiella burnetii CbuG_Q212   4 4
No Yes Coxiella burnetii RSA 331   4 4
No Yes Coxiella burnetii RSA 493   4 4
No Yes Legionella pneumophila str. Paris   6 6
No Yes Legionella pneumophila str. Lens   6 6
No Yes Legionella pneumophila subsp. pneumophila LPE509   6 6
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   6 6
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   6 6
No Yes Legionella pneumophila subsp. pneumophila   5 5
No Yes Legionella pneumophila subsp. pneumophila   7 7
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   6 6
No Yes Legionella pneumophila 2300/99 Alcoy   6 6
No Yes Proteus mirabilis BB2000   4 4
No Yes Morganella morganii subsp. morganii KT   4 4
No Yes Edwardsiella tarda C07-087   3 3
No Yes Edwardsiella tarda FL6-60   3 3
No Yes Rahnella aquatilis HX2   3 3
No Yes Yersinia pseudotuberculosis PB1/+   4 4
No Yes Yersinia pseudotuberculosis YPIII   4 4
No Yes Yersinia pseudotuberculosis IP 32953   4 4
No Yes Yersinia pestis biovar Microtus str. 91001   4 4
No Yes Yersinia pestis A1122   4 4
No Yes Yersinia pestis Z176003   4 4
No Yes Yersinia pestis D182038   4 4
No Yes Yersinia pestis D106004   4 4
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   4 4
No Yes Yersinia pestis Nepal516   4 4
No Yes Yersinia pestis Antiqua   4 4
No Yes Yersinia pestis Angola   4 4
No Yes Yersinia pestis CO92   4 4
No Yes Yersinia pestis KIM10+   4 4
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   3 3
No Yes Yersinia enterocolitica subsp. palearctica Y11   3 3
No Yes Serratia sp. AS13   4 4
No Yes Serratia plymuthica S13   4 4
No Yes Serratia plymuthica 4Rx13   3 3
No Yes Serratia marcescens FGI94   3 3
No Yes Serratia marcescens WW4   4 4
No Yes Serratia liquefaciens ATCC 27592   4 4
No Yes Dickeya dadantii Ech586   3 3
No Yes Dickeya dadantii 3937   3 3
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   3 3
No Yes Pantoea ananatis LMG 5342   4 4
No Yes Pantoea ananatis PA13   4 4
No Yes Pantoea ananatis AJ13355   4 4
No Yes Erwinia pyrifoliae DSM 12163   4 4
No Yes Erwinia amylovora CFBP1430   4 4
No Yes Cronobacter sakazakii CMCC 45402   4 4
No Yes Cronobacter sakazakii SP291   4 4
No Yes Cronobacter sakazakii ATCC BAA-894   4 4
No Yes Raoultella ornithinolytica B6   4 4
No Yes Shigella sonnei 53G   4 4
No Yes Shigella flexneri 2002017   4 4
No Yes Shigella flexneri 2a str. 2457T   4 4
No Yes Shigella flexneri 2a str. 301   4 4
No Yes Shigella dysenteriae 1617   4 4
No Yes Shigella boydii Sb227   4 4
No Yes Salmonella bongori N268-08   4 4
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   4 4
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   4 4
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   4 4
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   4 4
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   4 4
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   4 4
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   4 4
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   4 4
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   4 4
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   4 4
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   4 4
No Yes Salmonella enterica serovar Bovismorbificans genomics   4 4
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   4 4
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   4 4
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   4 4
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   4 4
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   4 4
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   4 4
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   4 4
No Yes Klebsiella oxytoca KCTC 1686   4 4
No Yes Klebsiella pneumoniae JM45   4 4
No Yes Klebsiella pneumoniae CG43   4 4
No Yes Klebsiella pneumoniae KCTC 2242   4 4
No Yes Klebsiella pneumoniae 342   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   4 4
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   4 4
No Yes Enterobacter aerogenes EA1509E   4 4
No Yes Escherichia coli E24377A   4 4
No Yes Escherichia coli E. coli PMV-1   4 4
No Yes Escherichia coli JJ1886   4 4
No Yes Escherichia coli LY180   4 4
No Yes Escherichia coli APEC O78   4 4
No Yes Escherichia coli O7:K1 str. CE10   4 4
No Yes Escherichia coli O104:H4 str. 2009EL-2050   4 4
No Yes Escherichia coli O104:H4 str. 2009EL-2071   4 4
No Yes Escherichia coli O104:H4 str. 2011C-3493   4 4
No Yes Escherichia coli NA114   4 4
No Yes Escherichia coli P12b   4 4
No Yes Escherichia coli str. 'clone D i2'   4 4
No Yes Escherichia coli str. 'clone D i14'   4 4
No Yes Escherichia coli UM146   4 4
No Yes Escherichia coli 042   4 4
No Yes Escherichia coli Xuzhou21   4 4
No Yes Escherichia coli IHE3034   4 4
No Yes Escherichia coli UMNK88   4 4
No Yes Escherichia coli O83:H1 str. NRG 857C   4 4
No Yes Escherichia coli ABU 83972   4 4
No Yes Escherichia coli KO11FL   4 4
No Yes Escherichia coli KO11FL   4 4
No Yes Escherichia coli LF82   4 4
No Yes Escherichia coli ED1a   4 4
No Yes Escherichia coli IAI39   4 4
No Yes Escherichia coli UMN026   4 4
No Yes Escherichia coli 55989   4 4
No Yes Escherichia coli S88   4 4
No Yes Escherichia coli IAI1   4 4
No Yes Escherichia coli W   4 4
No Yes Escherichia coli W   4 4
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli ATCC 8739   4 4
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli SMS-3-5   4 4
No Yes Escherichia coli SE15   4 4
No Yes Escherichia coli SE11   4 4
No Yes Escherichia coli APEC O1   4 4
No Yes Escherichia coli O103:H2 str. 12009   4 4
No Yes Escherichia coli UTI89   4 4
No Yes Escherichia coli 536   3 3
No Yes Escherichia coli HS   4 4
No Yes Escherichia coli ETEC H10407   4 4
No Yes Escherichia coli O55:H7 str. RM12579   4 4
No Yes Escherichia coli O55:H7 str. CB9615   4 4
No Yes Escherichia coli O26:H11 str. 11368   4 4
No Yes Escherichia coli CFT073   4 4
No Yes Escherichia coli O111:H- str. 11128   4 4
No Yes Escherichia coli O127:H6 str. E2348/69   4 4
No Yes Escherichia coli O157:H7 str. TW14359   4 4
No Yes Escherichia coli O157:H7 str. EC4115   4 4
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   4 4
No Yes Escherichia coli str. K-12 substr. MDS42   4 4
No Yes Escherichia coli BW2952   4 4
No Yes Escherichia coli str. K-12 substr. MG1655   4 4
No Yes Escherichia coli str. K-12 substr. W3110   4 4
No Yes Escherichia coli str. K-12 substr. DH10B   5 5
No Yes Escherichia coli B str. REL606   4 4
No Yes Enterobacter cloacae SCF1   4 4
No Yes Enterobacter cloacae EcWSU1   4 4
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   4 4
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   3 3
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   4 4
No Yes Azotobacter vinelandii CA6   3 3
No Yes Azotobacter vinelandii CA   3 3
No Yes Pseudomonas denitrificans ATCC 13867   5 4
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 3
No Yes Pseudomonas syringae pv. syringae B728a   3 3
No Yes Pseudomonas stutzeri CCUG 29243   5 5
No Yes Pseudomonas stutzeri DSM 10701   6 6
No Yes Pseudomonas stutzeri DSM 4166   5 5
No Yes Pseudomonas stutzeri RCH2   5 5
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   5 5
No Yes Pseudomonas monteilii SB3101   4 4
No Yes Pseudomonas monteilii SB3078   4 4
No Yes Pseudomonas putida H8234   4 4
No Yes Pseudomonas putida HB3267   4 4
No Yes Pseudomonas putida NBRC 14164   4 4
No Yes Pseudomonas putida DOT-T1E   5 5
No Yes Pseudomonas putida S16   4 4
No Yes Pseudomonas putida BIRD-1   5 5
No Yes Pseudomonas putida W619   5 5
No Yes Pseudomonas putida ND6   5 5
No Yes Pseudomonas putida KT2440   5 5
No Yes Pseudomonas putida GB-1   5 5
No Yes Pseudomonas protegens CHA0   3 3
No Yes Pseudomonas poae RE*1-1-14   5 5
No Yes Pseudomonas fluorescens F113   4 4
No Yes Pseudomonas fluorescens A506   5 5
No Yes Pseudomonas fluorescens R124   2 2
No Yes Pseudomonas fluorescens Pf0-1   3 3
No Yes Pseudomonas resinovorans NBRC 106553   5 4
No Yes Pseudomonas mendocina NK-01   4 4
No Yes Pseudomonas aeruginosa SCV20265   6 5
No Yes Pseudomonas aeruginosa MTB-1   6 5
No Yes Pseudomonas aeruginosa LES431   6 5
No Yes Pseudomonas aeruginosa RP73   5 4
No Yes Pseudomonas aeruginosa B136-33   6 5
No Yes Pseudomonas aeruginosa PA1R   6 5
No Yes Pseudomonas aeruginosa PA1   6 5
No Yes Pseudomonas aeruginosa DK2   6 5
No Yes Pseudomonas aeruginosa NCGM2.S1   6 5
No Yes Pseudomonas aeruginosa M18   6 5
No Yes Pseudomonas aeruginosa LESB58   6 5
No Yes Pseudomonas aeruginosa PA7   6 5
No Yes Pseudomonas aeruginosa PAO1   6 5
No Yes Acinetobacter genomosp. 13TU RUH2624   3 3
No Yes Acinetobacter sp. SH024   3 3
No Yes Acinetobacter calcoaceticus ruh2202   3 3
No Yes Acinetobacter baumannii ZW85-1   3 3
No Yes Acinetobacter baumannii TYTH-1   2 2
No Yes Acinetobacter baumannii BJAB0868   3 3
No Yes Acinetobacter baumannii BJAB0715   3 3
No Yes Acinetobacter baumannii BJAB07104   3 3
No Yes Acinetobacter baumannii TCDC-AB0715   3 3
No Yes Acinetobacter baumannii D1279779   3 3
No Yes Acinetobacter baumannii MDR-TJ   3 3
No Yes Acinetobacter baumannii 1656-2   3 3
No Yes Acinetobacter baumannii ATCC 19606   3 3
No Yes Acinetobacter baumannii AB307-0294   3 3
No Yes Acinetobacter baumannii AYE   3 3
No Yes Acinetobacter baumannii SDF   3 3
No Yes Acinetobacter baumannii MDR-ZJ06   3 3
No Yes Acinetobacter baumannii AB0057   3 3
No Yes Acinetobacter baumannii ACICU   3 3
No Yes Acinetobacter radioresistens SH164   2 2
No Yes Acinetobacter junii SH205   2 2
No Yes Acinetobacter johnsonii SH046   2 2
No Yes Acinetobacter lwoffii SH145   2 2
No Yes Methylophaga sp. JAM7   3 3
No Yes Cycloclasticus zancles 7-ME   3 3
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   1 1
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. holarctica F92   1 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   1 1
No Yes Francisella tularensis subsp. holarctica OSU18   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Francisella tularensis subsp. holarctica FSC200   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   1 1
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella tularensis subsp. tularensis FSC198   1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   6 6
No Yes 1_050719N (meta-genome)   9 9
No Yes 1_Upper_euphotic (meta-genome)   4 4
No Yes 2_050719S (meta-genome)   13 13
No Yes 3_050719R (meta-genome)   17 15
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   14 14
No Yes 4_Deep_abyss (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   14 14
No Yes 5_Below_upper_mesopelagic (meta-genome)   4 4
No Yes 7_Oxygen_minimum_layer (meta-genome)   7 7
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   11 11
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   11 11
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   24 24
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   10 7
No Yes Combined (meta-genome)   53 53
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   41 41
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   11 11
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   18 18
No Yes Dump bottom (Dump bottom) (meta-genome)   96 93
No Yes Dump top (Dump top) (meta-genome)   65 62
No Yes Endophytic microbiome from Rice (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   17 17
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   15 15
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   7 7
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   11 11
No Yes Fungus garden combined (combined) (meta-genome)   35 35
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   49 49
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   54 54
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   64 64
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   8 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   14 14
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   3 3
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   12 12
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   6 6
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   8 8
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   104 102
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   19 18
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   23 22
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   39 39
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   15 15
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   170133 166620
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   30 30
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   3 3
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   7 6
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   38 38
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   20 20
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   20 19
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   23 22
No Yes Sludge/US, Jazz Assembly (meta-genome)   7 7
No Yes Sludge/US, Phrap Assembly (meta-genome)   19 19
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   35 34
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   58 58
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   11 11
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   18 18
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   22 22
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   17 17
No Yes STRING v9.0.5 (STRING)   1543 1513
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   33 33
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   6 6
No Yes Uniprot 2018_03 genome   33742 33168
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   7 6
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   16 15
No Yes Global Ocean Sampling Expedition (GOS)   1491 1477
No Yes NCBI plasmid sequences (Plasmids)   14 14
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes TargetDB (Targets)   41 41
No Yes The Salmonella enterica Pan-genome (meta-genome)   124 124
No Yes UniProt viral sequences (Viral)   11 11

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