SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


SSo0622-like superfamily domain assignments
in
Monodelphis domestica 69_5

Assignment details

(show help)


Monodelphis domestica 69_5 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000023820   1.16e-60   26-213   SSo0622-like  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a SSo0622-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   3912 3912
No Yes Homo sapiens 76_38 Human 4 4
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 3 3
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 1 1
No Yes Oikopleura dioica   1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   1 1
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Strigamia maritima 22   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   2 2
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   2 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   2 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   2 2
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   2 2
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   3 3
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Panicum virgatum v202 Switchgrass 4 4
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 2 2
No Yes Zea mays v181 Maize 2 2
No Yes Sorghum bicolor Sorghum 2 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   2 2
No Yes Trypanosoma cruzi strain CL Brener   2 2
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   2 2
No Yes Trypanosoma brucei TREU927 v4.1   2 2
No Yes Aureococcus anophagefferens   2 2
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   2 2
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   2 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Nanoarchaeum equitans Kin4-M   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Fervidicoccus fontis Kam940   2 2
No Yes Pyrolobus fumarii 1A   2 2
No Yes Hyperthermus butylicus DSM 5456   2 2
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Aeropyrum pernix K1   1 1
No Yes Ignicoccus hospitalis KIN4/I   2 2
No Yes Thermosphaera aggregans DSM 11486   1 1
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   1 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Desulfurococcus mucosus DSM 2162   1 1
No Yes Metallosphaera sedula DSM 5348   1 1
No Yes Acidianus hospitalis W1   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoproteus tenax Kra 1   1 1
No Yes Methanopyrus kandleri AV19   1 1
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Thermococcus sp. 4557   2 2
No Yes Thermococcus onnurineus NA1   2 2
No Yes Thermococcus kodakarensis KOD1   2 2
No Yes Thermococcus gammatolerans EJ3   2 2
No Yes Thermococcus sibiricus MM 739   2 2
No Yes Thermococcus barophilus MP   2 2
No Yes Pyrococcus sp. ST04   2 2
No Yes Pyrococcus yayanosii CH1   2 2
No Yes Pyrococcus horikoshii OT3   2 2
No Yes Pyrococcus abyssi GE5   2 2
No Yes Pyrococcus furiosus COM1   2 2
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Methanococcus aeolicus Nankai-3   1 1
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanococcus voltae A3   1 1
No Yes Methanococcus vannielii SB   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Trypanosoma brucei Lister 427 v4.1   2 2
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   2 1
No Yes Plasmodium falciparum Dd2   2 1
No Yes Caldisphaera lagunensis DSM 15908   1 1
No Yes Aeropyrum camini SY1 = JCM 12091   1 1
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Thermococcus sp. AM4   2 2
No Yes Thermococcus sp. CL1   2 2
No Yes Thermococcus litoralis DSM 5473   2 2
No Yes Pyrococcus sp. NA2   2 2
No Yes Pyrococcus furiosus DSM 3638   2 2
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Methanococcus maripaludis S2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 6 5
No Yes Homo sapiens (NCBI version) Human 2 2
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   5 5
No Yes NCBI 2017_08 genome   1054 1042
No Yes Protozoadb 2010_08 (Protozoadb)   27 25
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   146 144
No Yes Uniprot 2018_03 genome   1555 1518
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   24 24
No Yes TargetDB (Targets)   31 31
No Yes UniProt viral sequences (Viral)   1 1

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]