SUPERFAMILY 1.75 HMM library and genome assignments server

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XseB-like family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1vp7A   6.81e-20   0.000027   29-92   1vp7 B:  

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View all assignments containing a XseB-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   927 927
No Yes Bordetella petrii DSM 12804   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   800 800
No Yes STRING v9.0.5 (STRING)   5 5
No Yes Uniprot 2018_03 genome   78 78
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   18 18
No Yes TargetDB (Targets)   1 1

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